RNA–Protein interactions for RNA: ENST00000611899.4

PDE1B-209, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 628 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-209ENST00000611899 NPM1P06748 294 aaKnown RBP eCLIP36.99■■■■□ 3.51
PDE1B-209ENST00000611899 IGF1RP08069 1367 aa36.95■■■■□ 3.51
PDE1B-209ENST00000611899 KIF27Q86VH2 1401 aa36.94■■■■□ 3.5
PDE1B-209ENST00000611899 KIAA0586Q9BVV6 1533 aa36.92■■■■□ 3.5
PDE1B-209ENST00000611899 KIF13AQ9H1H9 1805 aa36.92■■■■□ 3.5
PDE1B-209ENST00000611899 FAM69CQ0P6D2 419 aa36.91■■■■□ 3.5
PDE1B-209ENST00000611899 ABCC10Q5T3U5 1492 aa36.87■■■■□ 3.49
PDE1B-209ENST00000611899 CUL7Q14999 1698 aa36.83■■■■□ 3.49
PDE1B-209ENST00000611899 MAPKBP1O60336 1514 aa36.83■■■■□ 3.49
PDE1B-209ENST00000611899 ADCY10Q96PN6 1610 aa36.8■■■■□ 3.48
PDE1B-209ENST00000611899 CARMIL1Q5VZK9 1371 aa36.72■■■■□ 3.47
PDE1B-209ENST00000611899 DIP2BQ9P265 1576 aa36.72■■■■□ 3.47
PDE1B-209ENST00000611899 PTPRGP23470 1445 aa36.67■■■■□ 3.46
PDE1B-209ENST00000611899 TTBK1Q5TCY1 1321 aaPredicted RBP36.64■■■■□ 3.46
PDE1B-209ENST00000611899 CARMIL2Q6F5E8 1435 aa36.59■■■■□ 3.45
PDE1B-209ENST00000611899 TNIKQ9UKE5 1360 aa36.57■■■■□ 3.45
PDE1B-209ENST00000611899 KDM6BO15054 1643 aa36.5■■■■□ 3.43
PDE1B-209ENST00000611899 IQGAP2Q13576 1575 aa36.49■■■■□ 3.43
PDE1B-209ENST00000611899 ABCC2Q92887 1545 aa36.48■■■■□ 3.43
PDE1B-209ENST00000611899 TSPOAP1O95153 1857 aa36.39■■■■□ 3.42
PDE1B-209ENST00000611899 ASXL2Q76L83 1435 aa36.39■■■■□ 3.42
PDE1B-209ENST00000611899 PLB1Q6P1J6 1458 aa36.37■■■■□ 3.41
PDE1B-209ENST00000611899 UHRF1BP1LA0JNW5 1464 aa36.37■■■■□ 3.41
PDE1B-209ENST00000611899 UACAQ9BZF9 1416 aa36.35■■■■□ 3.41
PDE1B-209ENST00000611899 DISP1Q96F81 1524 aa36.34■■■■□ 3.41
PDE1B-209ENST00000611899 RAPGEF2Q9Y4G8 1499 aa36.34■■■■□ 3.41
PDE1B-209ENST00000611899 KDM4FA0A1W2PPD8 638 aa36.29■■■■□ 3.4
PDE1B-209ENST00000611899 GLI2P10070 1586 aa36.26■■■■□ 3.39
PDE1B-209ENST00000611899 UGGT2Q9NYU1 1516 aa36.25■■■■□ 3.39
PDE1B-209ENST00000611899 KDM5BQ9UGL1 1544 aa36.19■■■■□ 3.38
PDE1B-209ENST00000611899 KIAA0556O60303 1618 aa36.16■■■■□ 3.38
PDE1B-209ENST00000611899 EPRSP07814 1512 aaKnown RBP36.15■■■■□ 3.38
PDE1B-209ENST00000611899 PPRC1Q5VV67 1664 aaKnown RBP36.14■■■■□ 3.38
PDE1B-209ENST00000611899 ZCCHC11Q5TAX3 1644 aaKnown RBP36.08■■■■□ 3.37
PDE1B-209ENST00000611899 TEX14Q8IWB6 1497 aa36.04■■■■□ 3.36
PDE1B-209ENST00000611899 MAP3K4Q9Y6R4 1608 aa36.03■■■■□ 3.36
PDE1B-209ENST00000611899 COL17A1Q9UMD9 1497 aaPredicted RBP36.01■■■■□ 3.36
PDE1B-209ENST00000611899 WDR7Q9Y4E6 1490 aa35.99■■■■□ 3.35
PDE1B-209ENST00000611899 GOLGA3Q08378 1498 aa35.98■■■■□ 3.35
PDE1B-209ENST00000611899 CTTNBP2Q8WZ74 1663 aa35.94■■■■□ 3.34
PDE1B-209ENST00000611899 ADGRL1O94910 1474 aa35.93■■■■□ 3.34
PDE1B-209ENST00000611899 PRXQ9BXM0 1461 aa35.87■■■■□ 3.33
PDE1B-209ENST00000611899 ABCA8O94911 1581 aa35.85■■■■□ 3.33
PDE1B-209ENST00000611899 KCNH8Q96L42 1107 aa35.84■■■■□ 3.33
PDE1B-209ENST00000611899 CD109Q6YHK3 1445 aa35.82■■■■□ 3.32
PDE1B-209ENST00000611899 MAGI3Q5TCQ9 1506 aa35.77■■■■□ 3.32
PDE1B-209ENST00000611899 FAM9AQ8IZU1 332 aaPredicted RBP35.76■■■■□ 3.32
PDE1B-209ENST00000611899 CFAP43Q8NDM7 1665 aa35.71■■■■□ 3.31
PDE1B-209ENST00000611899 P3H3Q8IVL6 736 aa35.69■■■■□ 3.3
PDE1B-209ENST00000611899 ARID3CA6NKF2 412 aa35.67■■■■□ 3.3
PDE1B-209ENST00000611899 ATP10BO94823 1461 aa35.59■■■■□ 3.29
PDE1B-209ENST00000611899 CSRNP3Q8WYN3 585 aa35.58■■■■□ 3.29
PDE1B-209ENST00000611899 HECW2Q9P2P5 1572 aa35.5■■■■□ 3.27
PDE1B-209ENST00000611899 ARAP3Q8WWN8 1544 aa35.49■■■■□ 3.27
PDE1B-209ENST00000611899 ILDR1Q86SU0 546 aaPredicted RBP35.49■■■■□ 3.27
PDE1B-209ENST00000611899 SAMD9Q5K651 1589 aa35.47■■■■□ 3.27
PDE1B-209ENST00000611899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.45■■■■□ 3.27
PDE1B-209ENST00000611899 HNRNPUL2Q1KMD3 747 aaKnown RBP35.45■■■■□ 3.27
PDE1B-209ENST00000611899 PHLDB1Q86UU1 1377 aa35.42■■■■□ 3.26
PDE1B-209ENST00000611899 ABCA9Q8IUA7 1624 aa35.41■■■■□ 3.26
PDE1B-209ENST00000611899 RAPGEF6Q8TEU7 1601 aa35.4■■■■□ 3.26
PDE1B-209ENST00000611899 KIF21BO75037 1637 aa35.39■■■■□ 3.26
PDE1B-209ENST00000611899 RANGAP1P46060 587 aaPredicted RBP35.38■■■■□ 3.25
PDE1B-209ENST00000611899 EEA1Q15075 1411 aa35.35■■■■□ 3.25
PDE1B-209ENST00000611899 RAPGEF3O95398 923 aa35.32■■■■□ 3.24
PDE1B-209ENST00000611899 NUP153P49790 1475 aaKnown RBP35.31■■■■□ 3.24
PDE1B-209ENST00000611899 NEO1Q92859 1461 aa35.31■■■■□ 3.24
PDE1B-209ENST00000611899 FHOD3Q2V2M9 1422 aa35.3■■■■□ 3.24
PDE1B-209ENST00000611899 PLEKHD1A6NEE1 506 aa35.21■■■■□ 3.23
PDE1B-209ENST00000611899 ARID4BQ4LE39 1312 aaPredicted RBP35.15■■■■□ 3.22
PDE1B-209ENST00000611899 PTPRMP28827 1452 aa35.15■■■■□ 3.22
PDE1B-209ENST00000611899 FRMPD1Q5SYB0 1578 aa35.13■■■■□ 3.21
PDE1B-209ENST00000611899 ADAMTSL3P82987 1691 aa35.11■■■■□ 3.21
PDE1B-209ENST00000611899 EFCAB5A4FU69 1503 aa35.09■■■■□ 3.21
PDE1B-209ENST00000611899 DENND4BO75064 1496 aaPredicted RBP35.09■■■■□ 3.21
PDE1B-209ENST00000611899 AKNAQ7Z591 1439 aa35.06■■■■□ 3.2
PDE1B-209ENST00000611899 FANCAO15360 1455 aa35.05■■■■□ 3.2
PDE1B-209ENST00000611899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.02■■■■□ 3.2
PDE1B-209ENST00000611899 BCORL1Q5H9F3 1711 aa35.01■■■■□ 3.2
PDE1B-209ENST00000611899 ARHGEF40Q8TER5 1519 aa35■■■■□ 3.19
PDE1B-209ENST00000611899 CFAP74Q9C0B2 1584 aa34.99■■■■□ 3.19
PDE1B-209ENST00000611899 MADDQ8WXG6 1647 aa34.97■■■■□ 3.19
PDE1B-209ENST00000611899 TTC37Q6PGP7 1564 aa34.95■■■■□ 3.18
PDE1B-209ENST00000611899 CDK13Q14004 1512 aaKnown RBP34.94■■■■□ 3.18
PDE1B-209ENST00000611899 RICTORQ6R327 1708 aa34.93■■■■□ 3.18
PDE1B-209ENST00000611899 EHMT2Q96KQ7 1210 aa34.92■■■■□ 3.18
PDE1B-209ENST00000611899 UBTFP17480 764 aaKnown RBP34.91■■■■□ 3.18
PDE1B-209ENST00000611899 ATP1B4Q9UN42 357 aaPredicted RBP34.89■■■■□ 3.18
PDE1B-209ENST00000611899 ZMYM4Q5VZL5 1548 aa34.87■■■■□ 3.17
PDE1B-209ENST00000611899 POGZQ7Z3K3 1410 aa34.87■■■■□ 3.17
PDE1B-209ENST00000611899 PCF11O94913 1555 aaKnown RBP34.87■■■■□ 3.17
PDE1B-209ENST00000611899 ZFYVE16Q7Z3T8 1539 aa34.86■■■■□ 3.17
PDE1B-209ENST00000611899 YEATS2Q9ULM3 1422 aa34.85■■■■□ 3.17
PDE1B-209ENST00000611899 PLCH2O75038 1416 aa34.84■■■■□ 3.17
PDE1B-209ENST00000611899 FMN1Q68DA7 1419 aa34.84■■■■□ 3.17
PDE1B-209ENST00000611899 FBXO41Q8TF61 875 aa34.83■■■■□ 3.17
PDE1B-209ENST00000611899 MAGI2Q86UL8 1455 aa34.83■■■■□ 3.17
PDE1B-209ENST00000611899 LMTK3Q96Q04 1460 aa34.83■■■■□ 3.17
PDE1B-209ENST00000611899 RIMS1Q86UR5 1692 aaKnown RBP34.82■■■■□ 3.16
PDE1B-209ENST00000611899 SCAPERQ9BY12 1400 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms