RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 KIF13AQ9H1H9 1805 aa30.75■■■□□ 2.51
MUC1-224ENST00000611577 NPM1P06748 294 aaKnown RBP eCLIP30.62■■■□□ 2.49
MUC1-224ENST00000611577 ABCC10Q5T3U5 1492 aa30.61■■■□□ 2.49
MUC1-224ENST00000611577 MAPKBP1O60336 1514 aa30.6■■■□□ 2.49
MUC1-224ENST00000611577 FAM69CQ0P6D2 419 aa30.6■■■□□ 2.49
MUC1-224ENST00000611577 ADCY10Q96PN6 1610 aa30.58■■■□□ 2.49
MUC1-224ENST00000611577 KIAA0586Q9BVV6 1533 aa30.58■■■□□ 2.49
MUC1-224ENST00000611577 IGF1RP08069 1367 aa30.57■■■□□ 2.48
MUC1-224ENST00000611577 KIF27Q86VH2 1401 aa30.56■■■□□ 2.48
MUC1-224ENST00000611577 CUL7Q14999 1698 aa30.55■■■□□ 2.48
MUC1-224ENST00000611577 DIP2BQ9P265 1576 aa30.54■■■□□ 2.48
MUC1-224ENST00000611577 CARMIL1Q5VZK9 1371 aa30.37■■■□□ 2.45
MUC1-224ENST00000611577 PTPRGP23470 1445 aa30.37■■■□□ 2.45
MUC1-224ENST00000611577 KDM6BO15054 1643 aa30.36■■■□□ 2.45
MUC1-224ENST00000611577 TTBK1Q5TCY1 1321 aaPredicted RBP30.34■■■□□ 2.45
MUC1-224ENST00000611577 TSPOAP1O95153 1857 aa30.31■■■□□ 2.44
MUC1-224ENST00000611577 CARMIL2Q6F5E8 1435 aa30.3■■■□□ 2.44
MUC1-224ENST00000611577 TNIKQ9UKE5 1360 aa30.29■■■□□ 2.44
MUC1-224ENST00000611577 IQGAP2Q13576 1575 aa30.26■■■□□ 2.43
MUC1-224ENST00000611577 ABCC2Q92887 1545 aa30.26■■■□□ 2.43
MUC1-224ENST00000611577 ASXL2Q76L83 1435 aa30.18■■■□□ 2.42
MUC1-224ENST00000611577 PLB1Q6P1J6 1458 aa30.16■■■□□ 2.42
MUC1-224ENST00000611577 UHRF1BP1LA0JNW5 1464 aa30.15■■■□□ 2.42
MUC1-224ENST00000611577 KDM4FA0A1W2PPD8 638 aa30.15■■■□□ 2.42
MUC1-224ENST00000611577 DISP1Q96F81 1524 aa30.13■■■□□ 2.41
MUC1-224ENST00000611577 UACAQ9BZF9 1416 aa30.13■■■□□ 2.41
MUC1-224ENST00000611577 GLI2P10070 1586 aa30.11■■■□□ 2.41
MUC1-224ENST00000611577 PPRC1Q5VV67 1664 aaKnown RBP30.07■■■□□ 2.41
MUC1-224ENST00000611577 RAPGEF2Q9Y4G8 1499 aa30.07■■■□□ 2.4
MUC1-224ENST00000611577 UGGT2Q9NYU1 1516 aa30.05■■■□□ 2.4
MUC1-224ENST00000611577 KDM5BQ9UGL1 1544 aa30.01■■■□□ 2.4
MUC1-224ENST00000611577 KIAA0556O60303 1618 aa30■■■□□ 2.39
MUC1-224ENST00000611577 EPRSP07814 1512 aaKnown RBP30■■■□□ 2.39
MUC1-224ENST00000611577 ZCCHC11Q5TAX3 1644 aaKnown RBP29.96■■■□□ 2.39
MUC1-224ENST00000611577 MAP3K4Q9Y6R4 1608 aa29.94■■■□□ 2.38
MUC1-224ENST00000611577 TEX14Q8IWB6 1497 aa29.9■■■□□ 2.38
MUC1-224ENST00000611577 COL17A1Q9UMD9 1497 aaPredicted RBP29.9■■■□□ 2.38
MUC1-224ENST00000611577 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
MUC1-224ENST00000611577 WDR7Q9Y4E6 1490 aa29.84■■■□□ 2.37
MUC1-224ENST00000611577 CTTNBP2Q8WZ74 1663 aa29.84■■■□□ 2.37
MUC1-224ENST00000611577 GOLGA3Q08378 1498 aa29.8■■■□□ 2.36
MUC1-224ENST00000611577 ABCA8O94911 1581 aa29.73■■■□□ 2.35
MUC1-224ENST00000611577 CD109Q6YHK3 1445 aa29.69■■■□□ 2.34
MUC1-224ENST00000611577 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
MUC1-224ENST00000611577 MAGI3Q5TCQ9 1506 aa29.67■■■□□ 2.34
MUC1-224ENST00000611577 CFAP43Q8NDM7 1665 aa29.67■■■□□ 2.34
MUC1-224ENST00000611577 KCNH8Q96L42 1107 aa29.67■■■□□ 2.34
MUC1-224ENST00000611577 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
MUC1-224ENST00000611577 ILDR1Q86SU0 546 aaPredicted RBP29.55■■■□□ 2.32
MUC1-224ENST00000611577 ARID3CA6NKF2 412 aa29.54■■■□□ 2.32
MUC1-224ENST00000611577 P3H3Q8IVL6 736 aa29.51■■■□□ 2.31
MUC1-224ENST00000611577 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.31
MUC1-224ENST00000611577 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
MUC1-224ENST00000611577 ATP10BO94823 1461 aa29.47■■■□□ 2.31
MUC1-224ENST00000611577 KIF21BO75037 1637 aa29.45■■■□□ 2.31
MUC1-224ENST00000611577 ARAP3Q8WWN8 1544 aa29.44■■■□□ 2.3
MUC1-224ENST00000611577 SAMD9Q5K651 1589 aa29.41■■■□□ 2.3
MUC1-224ENST00000611577 ABCA9Q8IUA7 1624 aa29.39■■■□□ 2.3
MUC1-224ENST00000611577 RAPGEF6Q8TEU7 1601 aa29.36■■■□□ 2.29
MUC1-224ENST00000611577 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
MUC1-224ENST00000611577 PHLDB1Q86UU1 1377 aa29.33■■■□□ 2.29
MUC1-224ENST00000611577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.31■■■□□ 2.28
MUC1-224ENST00000611577 HNRNPUL2Q1KMD3 747 aaKnown RBP29.31■■■□□ 2.28
MUC1-224ENST00000611577 NEO1Q92859 1461 aa29.28■■■□□ 2.28
MUC1-224ENST00000611577 RAPGEF3O95398 923 aa29.27■■■□□ 2.28
MUC1-224ENST00000611577 EEA1Q15075 1411 aa29.26■■■□□ 2.27
MUC1-224ENST00000611577 NUP153P49790 1475 aaKnown RBP29.25■■■□□ 2.27
MUC1-224ENST00000611577 RANGAP1P46060 587 aaPredicted RBP29.24■■■□□ 2.27
MUC1-224ENST00000611577 FHOD3Q2V2M9 1422 aa29.22■■■□□ 2.27
MUC1-224ENST00000611577 FRMPD1Q5SYB0 1578 aa29.2■■■□□ 2.26
MUC1-224ENST00000611577 ADAMTSL3P82987 1691 aa29.2■■■□□ 2.26
MUC1-224ENST00000611577 PTPRMP28827 1452 aa29.19■■■□□ 2.26
MUC1-224ENST00000611577 ARID4BQ4LE39 1312 aaPredicted RBP29.13■■■□□ 2.25
MUC1-224ENST00000611577 BCORL1Q5H9F3 1711 aa29.11■■■□□ 2.25
MUC1-224ENST00000611577 PLEKHD1A6NEE1 506 aa29.11■■■□□ 2.25
MUC1-224ENST00000611577 ARHGEF40Q8TER5 1519 aa29.1■■■□□ 2.25
MUC1-224ENST00000611577 MADDQ8WXG6 1647 aa29.09■■■□□ 2.25
MUC1-224ENST00000611577 DENND4BO75064 1496 aaPredicted RBP29.08■■■□□ 2.25
MUC1-224ENST00000611577 EFCAB5A4FU69 1503 aa29.07■■■□□ 2.24
MUC1-224ENST00000611577 FANCAO15360 1455 aa29.05■■■□□ 2.24
MUC1-224ENST00000611577 AKNAQ7Z591 1439 aa29.05■■■□□ 2.24
MUC1-224ENST00000611577 CFAP74Q9C0B2 1584 aa29.05■■■□□ 2.24
MUC1-224ENST00000611577 RICTORQ6R327 1708 aa29.04■■■□□ 2.24
MUC1-224ENST00000611577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
MUC1-224ENST00000611577 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.24
MUC1-224ENST00000611577 PCF11O94913 1555 aaKnown RBP29■■■□□ 2.23
MUC1-224ENST00000611577 RIMS1Q86UR5 1692 aaKnown RBP28.97■■■□□ 2.23
MUC1-224ENST00000611577 CDK13Q14004 1512 aaKnown RBP28.96■■■□□ 2.23
MUC1-224ENST00000611577 ZMYM4Q5VZL5 1548 aa28.95■■■□□ 2.23
MUC1-224ENST00000611577 LMTK3Q96Q04 1460 aa28.95■■■□□ 2.22
MUC1-224ENST00000611577 FBXO41Q8TF61 875 aa28.94■■■□□ 2.22
MUC1-224ENST00000611577 ZFYVE16Q7Z3T8 1539 aa28.94■■■□□ 2.22
MUC1-224ENST00000611577 POGZQ7Z3K3 1410 aa28.91■■■□□ 2.22
MUC1-224ENST00000611577 YEATS2Q9ULM3 1422 aa28.9■■■□□ 2.22
MUC1-224ENST00000611577 EHMT2Q96KQ7 1210 aa28.87■■■□□ 2.21
MUC1-224ENST00000611577 MAGI2Q86UL8 1455 aa28.86■■■□□ 2.21
MUC1-224ENST00000611577 PLPPR3Q6T4P5 718 aa28.86■■■□□ 2.21
MUC1-224ENST00000611577 HECW1Q76N89 1606 aa28.86■■■□□ 2.21
MUC1-224ENST00000611577 SIGLEC1Q9BZZ2 1709 aa28.86■■■□□ 2.21
MUC1-224ENST00000611577 PLCH2O75038 1416 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms