RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 EIF4G2P78344 907 aaKnown RBP eCLIP18.82■□□□□ 0.6
MUC1-223ENST00000611571 ANP32EQ9BTT0 268 aa18.81■□□□□ 0.6
MUC1-223ENST00000611571 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
MUC1-223ENST00000611571 B4GALNT3Q6L9W6 998 aa18.73■□□□□ 0.59
MUC1-223ENST00000611571 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
MUC1-223ENST00000611571 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
MUC1-223ENST00000611571 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
MUC1-223ENST00000611571 CCNB3Q8WWL7 1395 aa18.72■□□□□ 0.59
MUC1-223ENST00000611571 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
MUC1-223ENST00000611571 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
MUC1-223ENST00000611571 CHGAP10645 457 aaKnown RBP18.68■□□□□ 0.58
MUC1-223ENST00000611571 ARXQ96QS3 562 aa18.68■□□□□ 0.58
MUC1-223ENST00000611571 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
MUC1-223ENST00000611571 FOXD1Q16676 465 aa18.66■□□□□ 0.58
MUC1-223ENST00000611571 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
MUC1-223ENST00000611571 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
MUC1-223ENST00000611571 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
MUC1-223ENST00000611571 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
MUC1-223ENST00000611571 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.58
MUC1-223ENST00000611571 WIZO95785 1651 aa18.63■□□□□ 0.57
MUC1-223ENST00000611571 NACADO15069 1562 aa18.62■□□□□ 0.57
MUC1-223ENST00000611571 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
MUC1-223ENST00000611571 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
MUC1-223ENST00000611571 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
MUC1-223ENST00000611571 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
MUC1-223ENST00000611571 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
MUC1-223ENST00000611571 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
MUC1-223ENST00000611571 LAS1LQ9Y4W2 734 aaKnown RBP18.51■□□□□ 0.55
MUC1-223ENST00000611571 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
MUC1-223ENST00000611571 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
MUC1-223ENST00000611571 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
MUC1-223ENST00000611571 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
MUC1-223ENST00000611571 CARD11Q9BXL7 1154 aa18.49■□□□□ 0.55
MUC1-223ENST00000611571 RAPGEF2Q9Y4G8 1499 aa18.49■□□□□ 0.55
MUC1-223ENST00000611571 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
MUC1-223ENST00000611571 CUX2O14529 1486 aa18.48■□□□□ 0.55
MUC1-223ENST00000611571 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
MUC1-223ENST00000611571 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.55
MUC1-223ENST00000611571 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
MUC1-223ENST00000611571 NEUROD2Q15784 382 aa18.41■□□□□ 0.54
MUC1-223ENST00000611571 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
MUC1-223ENST00000611571 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
MUC1-223ENST00000611571 RGS3P49796 1198 aa18.38■□□□□ 0.53
MUC1-223ENST00000611571 NEFMP07197 916 aa18.38■□□□□ 0.53
MUC1-223ENST00000611571 HSP90AA1P07900 732 aaKnown RBP18.38■□□□□ 0.53
MUC1-223ENST00000611571 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
MUC1-223ENST00000611571 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
MUC1-223ENST00000611571 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
MUC1-223ENST00000611571 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
MUC1-223ENST00000611571 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
MUC1-223ENST00000611571 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
MUC1-223ENST00000611571 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
MUC1-223ENST00000611571 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
MUC1-223ENST00000611571 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
MUC1-223ENST00000611571 DEKP35659 375 aaKnown RBP18.3■□□□□ 0.52
MUC1-223ENST00000611571 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
MUC1-223ENST00000611571 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
MUC1-223ENST00000611571 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
MUC1-223ENST00000611571 PKD2Q13563 968 aa18.26■□□□□ 0.51
MUC1-223ENST00000611571 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
MUC1-223ENST00000611571 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
MUC1-223ENST00000611571 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
MUC1-223ENST00000611571 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
MUC1-223ENST00000611571 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
MUC1-223ENST00000611571 ARHGAP35Q9NRY4 1499 aa18.22■□□□□ 0.51
MUC1-223ENST00000611571 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
MUC1-223ENST00000611571 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
MUC1-223ENST00000611571 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
MUC1-223ENST00000611571 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
MUC1-223ENST00000611571 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
MUC1-223ENST00000611571 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
MUC1-223ENST00000611571 PRKRIP1Q9H875 184 aaPredicted RBP18.09■□□□□ 0.49
MUC1-223ENST00000611571 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
MUC1-223ENST00000611571 ANP32BQ92688 251 aaKnown RBP18.07■□□□□ 0.48
MUC1-223ENST00000611571 PLIN1O60240 522 aa18.06■□□□□ 0.48
MUC1-223ENST00000611571 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
MUC1-223ENST00000611571 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
MUC1-223ENST00000611571 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
MUC1-223ENST00000611571 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
MUC1-223ENST00000611571 NUP155O75694 1391 aa18.04■□□□□ 0.48
MUC1-223ENST00000611571 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
MUC1-223ENST00000611571 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
MUC1-223ENST00000611571 BECN1Q14457 450 aa18.03■□□□□ 0.48
MUC1-223ENST00000611571 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
MUC1-223ENST00000611571 FMN1Q68DA7 1419 aa18.03■□□□□ 0.48
MUC1-223ENST00000611571 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
MUC1-223ENST00000611571 FTSJ3Q8IY81 847 aaKnown RBP18.02■□□□□ 0.48
MUC1-223ENST00000611571 TMF1P82094 1093 aa18.02■□□□□ 0.47
MUC1-223ENST00000611571 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
MUC1-223ENST00000611571 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
MUC1-223ENST00000611571 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
MUC1-223ENST00000611571 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.47
MUC1-223ENST00000611571 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
MUC1-223ENST00000611571 KIF21BO75037 1637 aa17.98■□□□□ 0.47
MUC1-223ENST00000611571 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
MUC1-223ENST00000611571 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
MUC1-223ENST00000611571 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
MUC1-223ENST00000611571 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
MUC1-223ENST00000611571 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
MUC1-223ENST00000611571 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms