RNA–Protein interactions for RNA: ENST00000611555.4

C22orf39-206, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 1,977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-206ENST00000611555 ARHGAP35Q9NRY4 1499 aa31.91■■■□□ 2.7
C22orf39-206ENST00000611555 PPARGC1BQ86YN6 1023 aaKnown RBP31.87■■■□□ 2.69
C22orf39-206ENST00000611555 SNAPC4Q5SXM2 1469 aa31.85■■■□□ 2.69
C22orf39-206ENST00000611555 MAGI1Q96QZ7 1491 aaPredicted RBP31.8■■■□□ 2.68
C22orf39-206ENST00000611555 EFCAB5A4FU69 1503 aa31.75■■■□□ 2.67
C22orf39-206ENST00000611555 APLP2Q06481 763 aa31.75■■■□□ 2.67
C22orf39-206ENST00000611555 GRIN2AQ12879 1464 aa31.69■■■□□ 2.66
C22orf39-206ENST00000611555 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
C22orf39-206ENST00000611555 P3H3Q8IVL6 736 aa31.64■■■□□ 2.66
C22orf39-206ENST00000611555 CHMP7Q8WUX9 453 aaPredicted RBP31.64■■■□□ 2.66
C22orf39-206ENST00000611555 TTBK1Q5TCY1 1321 aaPredicted RBP31.64■■■□□ 2.66
C22orf39-206ENST00000611555 IQGAP2Q13576 1575 aa31.63■■■□□ 2.65
C22orf39-206ENST00000611555 FHOD3Q2V2M9 1422 aa31.61■■■□□ 2.65
C22orf39-206ENST00000611555 SAMD9Q5K651 1589 aa31.6■■■□□ 2.65
C22orf39-206ENST00000611555 FBLN2P98095 1184 aa31.57■■■□□ 2.64
C22orf39-206ENST00000611555 KIAA0586Q9BVV6 1533 aa31.55■■■□□ 2.64
C22orf39-206ENST00000611555 FMN1Q68DA7 1419 aa31.5■■■□□ 2.63
C22orf39-206ENST00000611555 CEP170Q5SW79 1584 aa31.46■■■□□ 2.63
C22orf39-206ENST00000611555 UGGT2Q9NYU1 1516 aa31.46■■■□□ 2.63
C22orf39-206ENST00000611555 PCF11O94913 1555 aaKnown RBP31.45■■■□□ 2.63
C22orf39-206ENST00000611555 NUP160Q12769 1436 aa31.43■■■□□ 2.62
C22orf39-206ENST00000611555 FYCO1Q9BQS8 1478 aa31.42■■■□□ 2.62
C22orf39-206ENST00000611555 CASKIN1Q8WXD9 1431 aa31.4■■■□□ 2.62
C22orf39-206ENST00000611555 MAP3K1Q13233 1512 aa31.4■■■□□ 2.62
C22orf39-206ENST00000611555 KANK4Q5T7N3 995 aaPredicted RBP31.37■■■□□ 2.61
C22orf39-206ENST00000611555 TIAM1Q13009 1591 aa31.37■■■□□ 2.61
C22orf39-206ENST00000611555 ATP1B4Q9UN42 357 aaPredicted RBP31.36■■■□□ 2.61
C22orf39-206ENST00000611555 DISP1Q96F81 1524 aa31.29■■■□□ 2.6
C22orf39-206ENST00000611555 KIAA0556O60303 1618 aa31.29■■■□□ 2.6
C22orf39-206ENST00000611555 CHD1O14646 1710 aa31.29■■■□□ 2.6
C22orf39-206ENST00000611555 CFAP43Q8NDM7 1665 aa31.28■■■□□ 2.6
C22orf39-206ENST00000611555 LRRC9Q6ZRR7 1453 aa31.23■■■□□ 2.59
C22orf39-206ENST00000611555 JPH4Q96JJ6 628 aa31.23■■■□□ 2.59
C22orf39-206ENST00000611555 CARMIL2Q6F5E8 1435 aa31.19■■■□□ 2.58
C22orf39-206ENST00000611555 HECW1Q76N89 1606 aa31.14■■■□□ 2.57
C22orf39-206ENST00000611555 LRRIQ1Q96JM4 1722 aa31.1■■■□□ 2.57
C22orf39-206ENST00000611555 CCDC18Q5T9S5 1454 aa31.09■■■□□ 2.57
C22orf39-206ENST00000611555 HRCP23327 699 aa31.04■■■□□ 2.56
C22orf39-206ENST00000611555 RRBP1Q9P2E9 1410 aaKnown RBP31.03■■■□□ 2.56
C22orf39-206ENST00000611555 MTUS2Q5JR59 1369 aa31.03■■■□□ 2.56
C22orf39-206ENST00000611555 EPRSP07814 1512 aaKnown RBP31.02■■■□□ 2.56
C22orf39-206ENST00000611555 PRG4Q92954 1404 aaPredicted RBP31.02■■■□□ 2.56
C22orf39-206ENST00000611555 RAPGEF6Q8TEU7 1601 aa31■■■□□ 2.55
C22orf39-206ENST00000611555 SHROOM2Q13796 1616 aa30.97■■■□□ 2.55
C22orf39-206ENST00000611555 CCNB3Q8WWL7 1395 aa30.95■■■□□ 2.55
C22orf39-206ENST00000611555 PHLDB1Q86UU1 1377 aa30.95■■■□□ 2.54
C22orf39-206ENST00000611555 EHBP1L1Q8N3D4 1523 aa30.94■■■□□ 2.54
C22orf39-206ENST00000611555 HNRNPUL2Q1KMD3 747 aaKnown RBP30.94■■■□□ 2.54
C22orf39-206ENST00000611555 NUP153P49790 1475 aaKnown RBP30.93■■■□□ 2.54
C22orf39-206ENST00000611555 CDK13Q14004 1512 aaKnown RBP30.93■■■□□ 2.54
C22orf39-206ENST00000611555 CLASP1Q7Z460 1538 aa30.92■■■□□ 2.54
C22orf39-206ENST00000611555 PLB1Q6P1J6 1458 aa30.92■■■□□ 2.54
C22orf39-206ENST00000611555 ARID3CA6NKF2 412 aa30.89■■■□□ 2.54
C22orf39-206ENST00000611555 SUPT6HQ7KZ85 1726 aaKnown RBP30.86■■■□□ 2.53
C22orf39-206ENST00000611555 MAGI3Q5TCQ9 1506 aa30.86■■■□□ 2.53
C22orf39-206ENST00000611555 PTPRGP23470 1445 aa30.84■■■□□ 2.53
C22orf39-206ENST00000611555 NCOA2Q15596 1464 aa30.83■■■□□ 2.53
C22orf39-206ENST00000611555 ABCA8O94911 1581 aa30.82■■■□□ 2.52
C22orf39-206ENST00000611555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.8■■■□□ 2.52
C22orf39-206ENST00000611555 CDK11AQ9UQ88 783 aaPredicted RBP30.8■■■□□ 2.52
C22orf39-206ENST00000611555 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
C22orf39-206ENST00000611555 ARHGEF11O15085 1522 aa30.74■■■□□ 2.51
C22orf39-206ENST00000611555 FGD6Q6ZV73 1430 aa30.73■■■□□ 2.51
C22orf39-206ENST00000611555 MYOM3Q5VTT5 1437 aa30.72■■■□□ 2.51
C22orf39-206ENST00000611555 FAM50AQ14320 339 aaKnown RBP30.72■■■□□ 2.51
C22orf39-206ENST00000611555 CCER1Q8TC90 406 aaPredicted RBP30.7■■■□□ 2.51
C22orf39-206ENST00000611555 ZEB1P37275 1124 aaPredicted RBP30.7■■■□□ 2.5
C22orf39-206ENST00000611555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.69■■■□□ 2.51e-8■■□□□ 12.4
C22orf39-206ENST00000611555 ITGAEP38570 1179 aa30.68■■■□□ 2.5
C22orf39-206ENST00000611555 UACAQ9BZF9 1416 aa30.67■■■□□ 2.5
C22orf39-206ENST00000611555 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
C22orf39-206ENST00000611555 TROQ12816 1431 aaPredicted RBP30.65■■■□□ 2.5
C22orf39-206ENST00000611555 ATP10BO94823 1461 aa30.64■■■□□ 2.5
C22orf39-206ENST00000611555 PLEKHD1A6NEE1 506 aa30.57■■■□□ 2.48
C22orf39-206ENST00000611555 ABCC2Q92887 1545 aa30.56■■■□□ 2.48
C22orf39-206ENST00000611555 PTPN23Q9H3S7 1636 aa30.55■■■□□ 2.48
C22orf39-206ENST00000611555 MIA2Q96PC5 1412 aa30.54■■■□□ 2.48
C22orf39-206ENST00000611555 ADCY10Q96PN6 1610 aa30.53■■■□□ 2.48
C22orf39-206ENST00000611555 TCOF1Q13428 1488 aaKnown RBP30.49■■■□□ 2.47
C22orf39-206ENST00000611555 KIF14Q15058 1648 aa30.48■■■□□ 2.47
C22orf39-206ENST00000611555 UHRF1BP1LA0JNW5 1464 aa30.46■■■□□ 2.47
C22orf39-206ENST00000611555 ITSN2Q9NZM3 1697 aa30.41■■■□□ 2.46
C22orf39-206ENST00000611555 SETD5Q9C0A6 1442 aa30.39■■■□□ 2.46
C22orf39-206ENST00000611555 GPATCH8Q9UKJ3 1502 aaKnown RBP30.38■■■□□ 2.45
C22orf39-206ENST00000611555 RAB3GAP2Q9H2M9 1393 aa30.37■■■□□ 2.45
C22orf39-206ENST00000611555 KDM5BQ9UGL1 1544 aa30.35■■■□□ 2.45
C22orf39-206ENST00000611555 CFDP1Q9UEE9 299 aaPredicted RBP30.35■■■□□ 2.45
C22orf39-206ENST00000611555 PTPRKQ15262 1439 aa30.35■■■□□ 2.45
C22orf39-206ENST00000611555 ABCC10Q5T3U5 1492 aa30.35■■■□□ 2.45
C22orf39-206ENST00000611555 ZCCHC11Q5TAX3 1644 aaKnown RBP30.34■■■□□ 2.45
C22orf39-206ENST00000611555 DHX57Q6P158 1386 aaKnown RBP30.28■■■□□ 2.44
C22orf39-206ENST00000611555 CDC42BPAQ5VT25 1732 aa30.28■■■□□ 2.44
C22orf39-206ENST00000611555 ZNF644Q9H582 1327 aaPredicted RBP30.27■■■□□ 2.44
C22orf39-206ENST00000611555 HFM1A2PYH4 1435 aa30.27■■■□□ 2.44
C22orf39-206ENST00000611555 CAMSAP2Q08AD1 1489 aa30.26■■■□□ 2.43
C22orf39-206ENST00000611555 ZNF777Q9ULD5 760 aaPredicted RBP30.23■■■□□ 2.43
C22orf39-206ENST00000611555 DNMT1P26358 1616 aaKnown RBP30.22■■■□□ 2.43
C22orf39-206ENST00000611555 DAPK1P53355 1430 aa30.22■■■□□ 2.43
C22orf39-206ENST00000611555 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
C22orf39-206ENST00000611555 CHIC2Q9UKJ5 165 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms