RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
MTHFD1L-211ENST00000611279 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.42
MTHFD1L-211ENST00000611279 CCDC136Q96JN2 1154 aa23.95■■□□□ 1.42
MTHFD1L-211ENST00000611279 CCER2I3L3R5 266 aa23.94■■□□□ 1.42
MTHFD1L-211ENST00000611279 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
MTHFD1L-211ENST00000611279 KIF21BO75037 1637 aa23.93■■□□□ 1.42
MTHFD1L-211ENST00000611279 NOP58Q9Y2X3 529 aaKnown RBP23.9■■□□□ 1.42
MTHFD1L-211ENST00000611279 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
MTHFD1L-211ENST00000611279 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
MTHFD1L-211ENST00000611279 PAK3O75914 559 aaPredicted RBP23.87■■□□□ 1.41
MTHFD1L-211ENST00000611279 PPP4R2Q9NY27 417 aa23.87■■□□□ 1.41
MTHFD1L-211ENST00000611279 TONSLQ96HA7 1378 aa23.85■■□□□ 1.41
MTHFD1L-211ENST00000611279 MYT1LQ9UL68 1186 aa23.84■■□□□ 1.41
MTHFD1L-211ENST00000611279 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
MTHFD1L-211ENST00000611279 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.83■■□□□ 1.41
MTHFD1L-211ENST00000611279 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
MTHFD1L-211ENST00000611279 ANP32AP39687 249 aaKnown RBP23.8■■□□□ 1.4
MTHFD1L-211ENST00000611279 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
MTHFD1L-211ENST00000611279 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
MTHFD1L-211ENST00000611279 MRS2Q9HD23 443 aa23.75■■□□□ 1.39
MTHFD1L-211ENST00000611279 SETD5Q9C0A6 1442 aa23.74■■□□□ 1.39
MTHFD1L-211ENST00000611279 IL27Q8NEV9 243 aa23.72■■□□□ 1.39
MTHFD1L-211ENST00000611279 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
MTHFD1L-211ENST00000611279 CCDC184Q52MB2 194 aa23.69■■□□□ 1.38
MTHFD1L-211ENST00000611279 LAS1LQ9Y4W2 734 aaKnown RBP23.69■■□□□ 1.38
MTHFD1L-211ENST00000611279 EIF5BO60841 1220 aaKnown RBP23.68■■□□□ 1.38
MTHFD1L-211ENST00000611279 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
MTHFD1L-211ENST00000611279 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
MTHFD1L-211ENST00000611279 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
MTHFD1L-211ENST00000611279 UNC13AQ9UPW8 1703 aa23.6■■□□□ 1.37
MTHFD1L-211ENST00000611279 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
MTHFD1L-211ENST00000611279 HSPA5P11021 654 aaKnown RBP23.56■■□□□ 1.36
MTHFD1L-211ENST00000611279 CHIC2Q9UKJ5 165 aa23.54■■□□□ 1.36
MTHFD1L-211ENST00000611279 NEFMP07197 916 aa23.53■■□□□ 1.36
MTHFD1L-211ENST00000611279 IPO9Q96P70 1041 aaKnown RBP23.53■■□□□ 1.36
MTHFD1L-211ENST00000611279 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
MTHFD1L-211ENST00000611279 TIMELESSQ9UNS1 1208 aa23.5■■□□□ 1.35
MTHFD1L-211ENST00000611279 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
MTHFD1L-211ENST00000611279 ZNF326Q5BKZ1 582 aaKnown RBP23.46■■□□□ 1.35
MTHFD1L-211ENST00000611279 RRP7BPQ9NSQ0 103 aa23.45■■□□□ 1.34
MTHFD1L-211ENST00000611279 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.34
MTHFD1L-211ENST00000611279 ERICH6BQ5W0A0 696 aa23.45■■□□□ 1.34
MTHFD1L-211ENST00000611279 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
MTHFD1L-211ENST00000611279 FOXD1Q16676 465 aa23.4■■□□□ 1.34
MTHFD1L-211ENST00000611279 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
MTHFD1L-211ENST00000611279 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
MTHFD1L-211ENST00000611279 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
MTHFD1L-211ENST00000611279 CUX2O14529 1486 aa23.36■■□□□ 1.33
MTHFD1L-211ENST00000611279 DAXXQ9UER7 740 aaPredicted RBP23.35■■□□□ 1.33
MTHFD1L-211ENST00000611279 AKNAQ7Z591 1439 aa23.34■■□□□ 1.33
MTHFD1L-211ENST00000611279 ARID3CA6NKF2 412 aa23.34■■□□□ 1.33
MTHFD1L-211ENST00000611279 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
MTHFD1L-211ENST00000611279 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
MTHFD1L-211ENST00000611279 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
MTHFD1L-211ENST00000611279 BRPF3Q9ULD4 1205 aa23.28■■□□□ 1.32
MTHFD1L-211ENST00000611279 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
MTHFD1L-211ENST00000611279 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
MTHFD1L-211ENST00000611279 L3MBTL2Q969R5 705 aa23.21■■□□□ 1.31
MTHFD1L-211ENST00000611279 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
MTHFD1L-211ENST00000611279 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
MTHFD1L-211ENST00000611279 MTUS2Q5JR59 1369 aa23.2■■□□□ 1.3
MTHFD1L-211ENST00000611279 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
MTHFD1L-211ENST00000611279 EXOC6Q8TAG9 804 aa23.16■■□□□ 1.3
MTHFD1L-211ENST00000611279 ARXQ96QS3 562 aa23.16■■□□□ 1.3
MTHFD1L-211ENST00000611279 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
MTHFD1L-211ENST00000611279 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
MTHFD1L-211ENST00000611279 CCDC18Q5T9S5 1454 aa23.15■■□□□ 1.3
MTHFD1L-211ENST00000611279 PDE4AP27815 886 aa23.14■■□□□ 1.3
MTHFD1L-211ENST00000611279 FHOD3Q2V2M9 1422 aa23.12■■□□□ 1.29
MTHFD1L-211ENST00000611279 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
MTHFD1L-211ENST00000611279 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
MTHFD1L-211ENST00000611279 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
MTHFD1L-211ENST00000611279 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
MTHFD1L-211ENST00000611279 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
MTHFD1L-211ENST00000611279 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
MTHFD1L-211ENST00000611279 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
MTHFD1L-211ENST00000611279 PLIN1O60240 522 aa23.05■■□□□ 1.28
MTHFD1L-211ENST00000611279 KIF7Q2M1P5 1343 aa23.05■■□□□ 1.28
MTHFD1L-211ENST00000611279 GSE1Q14687 1217 aa23.02■■□□□ 1.28
MTHFD1L-211ENST00000611279 UACAQ9BZF9 1416 aa23.01■■□□□ 1.27
MTHFD1L-211ENST00000611279 MPHOSPH9Q99550 1183 aa23.01■■□□□ 1.27
MTHFD1L-211ENST00000611279 IGF1RP08069 1367 aa23.01■■□□□ 1.27
MTHFD1L-211ENST00000611279 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
MTHFD1L-211ENST00000611279 TCERG1O14776 1098 aaKnown RBP23■■□□□ 1.27
MTHFD1L-211ENST00000611279 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
MTHFD1L-211ENST00000611279 SLC4A1APQ9BWU0 796 aaKnown RBP22.98■■□□□ 1.27
MTHFD1L-211ENST00000611279 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.279e-7■■■■□ 24.3
MTHFD1L-211ENST00000611279 USP35Q9P2H5 1018 aa22.97■■□□□ 1.27
MTHFD1L-211ENST00000611279 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
MTHFD1L-211ENST00000611279 NFKBIBQ15653 356 aa22.96■■□□□ 1.27
MTHFD1L-211ENST00000611279 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
MTHFD1L-211ENST00000611279 RRP1P56182 461 aaKnown RBP22.94■■□□□ 1.26
MTHFD1L-211ENST00000611279 PTPRKQ15262 1439 aa22.93■■□□□ 1.26
MTHFD1L-211ENST00000611279 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
MTHFD1L-211ENST00000611279 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
MTHFD1L-211ENST00000611279 BACH2Q9BYV9 841 aa22.92■■□□□ 1.26
MTHFD1L-211ENST00000611279 CUX1P39880 1505 aa22.91■■□□□ 1.26
MTHFD1L-211ENST00000611279 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
MTHFD1L-211ENST00000611279 RGS3P49796 1198 aa22.91■■□□□ 1.26
MTHFD1L-211ENST00000611279 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms