RNA–Protein interactions for RNA: ENST00000610897.4

GNB1-209, Transcript of G protein subunit beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GNB1, Length 3,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-209ENST00000610897 EEA1Q15075 1411 aa28.47■■■□□ 2.15
GNB1-209ENST00000610897 ZBTB47Q9UFB7 747 aaPredicted RBP28.38■■■□□ 2.13
GNB1-209ENST00000610897 ANP32AP39687 249 aaKnown RBP28.37■■■□□ 2.13
GNB1-209ENST00000610897 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
GNB1-209ENST00000610897 IPO9Q96P70 1041 aaKnown RBP28.31■■■□□ 2.12
GNB1-209ENST00000610897 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
GNB1-209ENST00000610897 LAS1LQ9Y4W2 734 aaKnown RBP28.3■■■□□ 2.12
GNB1-209ENST00000610897 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
GNB1-209ENST00000610897 NPM2Q86SE8 214 aaKnown RBP28.25■■■□□ 2.11
GNB1-209ENST00000610897 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
GNB1-209ENST00000610897 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
GNB1-209ENST00000610897 BRPF3Q9ULD4 1205 aa28.23■■■□□ 2.11
GNB1-209ENST00000610897 NEFMP07197 916 aa28.21■■■□□ 2.11
GNB1-209ENST00000610897 KIF21BO75037 1637 aa28.2■■■□□ 2.11
GNB1-209ENST00000610897 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
GNB1-209ENST00000610897 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
GNB1-209ENST00000610897 CCNB3Q8WWL7 1395 aa28.13■■■□□ 2.09
GNB1-209ENST00000610897 TIMELESSQ9UNS1 1208 aa28.13■■■□□ 2.09
GNB1-209ENST00000610897 FAM9BQ8IZU0 186 aa28.12■■■□□ 2.09
GNB1-209ENST00000610897 PKNOX2Q96KN3 472 aa28.09■■■□□ 2.09
GNB1-209ENST00000610897 CCDC184Q52MB2 194 aa28.09■■■□□ 2.09
GNB1-209ENST00000610897 WASHC2AQ641Q2 1341 aa28.06■■■□□ 2.08
GNB1-209ENST00000610897 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
GNB1-209ENST00000610897 SENP3-EIF4A1A0A087X0R7 540 aa28.02■■■□□ 2.08
GNB1-209ENST00000610897 CUX2O14529 1486 aa27.97■■■□□ 2.07
GNB1-209ENST00000610897 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.06
GNB1-209ENST00000610897 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
GNB1-209ENST00000610897 CNGB1Q14028 1251 aaPredicted RBP27.91■■■□□ 2.06
GNB1-209ENST00000610897 C11orf95C9JLR9 678 aaPredicted RBP27.9■■■□□ 2.06
GNB1-209ENST00000610897 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
GNB1-209ENST00000610897 SETD5Q9C0A6 1442 aa27.89■■■□□ 2.06
GNB1-209ENST00000610897 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
GNB1-209ENST00000610897 MRS2Q9HD23 443 aa27.86■■■□□ 2.05
GNB1-209ENST00000610897 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
GNB1-209ENST00000610897 AKNAQ7Z591 1439 aa27.83■■■□□ 2.05
GNB1-209ENST00000610897 TONSLQ96HA7 1378 aa27.83■■■□□ 2.05
GNB1-209ENST00000610897 USP35Q9P2H5 1018 aa27.8■■■□□ 2.04
GNB1-209ENST00000610897 GSE1Q14687 1217 aa27.79■■■□□ 2.04
GNB1-209ENST00000610897 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
GNB1-209ENST00000610897 ZBED9Q6R2W3 1325 aa27.74■■■□□ 2.03
GNB1-209ENST00000610897 FRAT1Q92837 279 aaPredicted RBP27.74■■■□□ 2.03
GNB1-209ENST00000610897 PPM1GO15355 546 aaPredicted RBP27.72■■■□□ 2.03
GNB1-209ENST00000610897 VSIG10Q8N0Z9 540 aa27.68■■■□□ 2.02
GNB1-209ENST00000610897 SLC4A3P48751 1232 aa27.67■■■□□ 2.02
GNB1-209ENST00000610897 RSPH6AQ9H0K4 717 aa27.67■■■□□ 2.02
GNB1-209ENST00000610897 HSPA5P11021 654 aaKnown RBP27.64■■■□□ 2.02
GNB1-209ENST00000610897 PDE4AP27815 886 aa27.64■■■□□ 2.01
GNB1-209ENST00000610897 NFKBIBQ15653 356 aa27.62■■■□□ 2.01
GNB1-209ENST00000610897 PRKRIP1Q9H875 184 aaPredicted RBP27.61■■■□□ 2.01
GNB1-209ENST00000610897 ZMYND15Q9H091 742 aa27.6■■■□□ 2.01
GNB1-209ENST00000610897 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
GNB1-209ENST00000610897 PLEKHG5O94827 1062 aa27.55■■■□□ 2
GNB1-209ENST00000610897 SKAP1Q86WV1 359 aa27.54■■■□□ 2
GNB1-209ENST00000610897 GLIPR1L2Q4G1C9 344 aa27.53■■■□□ 2
GNB1-209ENST00000610897 NUDCQ9Y266 331 aa27.53■■■□□ 2
GNB1-209ENST00000610897 PHLDB1Q86UU1 1377 aa27.52■■■□□ 2
GNB1-209ENST00000610897 DCAF11Q8TEB1 546 aa27.52■■■□□ 2
GNB1-209ENST00000610897 BACH2Q9BYV9 841 aa27.48■■□□□ 1.99
GNB1-209ENST00000610897 FAM43AQ8N2R8 423 aa27.46■■□□□ 1.99
GNB1-209ENST00000610897 EXOC6Q8TAG9 804 aa27.46■■□□□ 1.99
GNB1-209ENST00000610897 TCERG1O14776 1098 aaKnown RBP27.45■■□□□ 1.99
GNB1-209ENST00000610897 DAXXQ9UER7 740 aaPredicted RBP27.45■■□□□ 1.98
GNB1-209ENST00000610897 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
GNB1-209ENST00000610897 SMG6Q86US8 1419 aaKnown RBP27.42■■□□□ 1.98
GNB1-209ENST00000610897 CNTLNQ9NXG0 1405 aa27.42■■□□□ 1.98
GNB1-209ENST00000610897 EIF4G2P78344 907 aaKnown RBP eCLIP27.42■■□□□ 1.984e-7■□□□□ 10.8
GNB1-209ENST00000610897 POLR3GLQ9BT43 218 aa27.4■■□□□ 1.98
GNB1-209ENST00000610897 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
GNB1-209ENST00000610897 FRAT2O75474 233 aaPredicted RBP27.39■■□□□ 1.98
GNB1-209ENST00000610897 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
GNB1-209ENST00000610897 PODXL2Q9NZ53 605 aa27.38■■□□□ 1.97
GNB1-209ENST00000610897 ARXQ96QS3 562 aa27.38■■□□□ 1.97
GNB1-209ENST00000610897 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
GNB1-209ENST00000610897 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
GNB1-209ENST00000610897 RNF123Q5XPI4 1314 aa27.35■■□□□ 1.97
GNB1-209ENST00000610897 DDRGK1Q96HY6 314 aa27.34■■□□□ 1.97
GNB1-209ENST00000610897 RRAGDQ9NQL2 400 aaPredicted RBP27.33■■□□□ 1.97
GNB1-209ENST00000610897 NAP1L5Q96NT1 182 aaPredicted RBP27.32■■□□□ 1.96
GNB1-209ENST00000610897 P3H3Q8IVL6 736 aa27.31■■□□□ 1.96
GNB1-209ENST00000610897 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
GNB1-209ENST00000610897 CCDC7Q96M83 1385 aa27.25■■□□□ 1.95
GNB1-209ENST00000610897 HSP90AA2PQ14568 343 aaPredicted RBP27.25■■□□□ 1.95
GNB1-209ENST00000610897 RRP1P56182 461 aaKnown RBP27.23■■□□□ 1.95
GNB1-209ENST00000610897 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
GNB1-209ENST00000610897 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
GNB1-209ENST00000610897 MS4A1P11836 297 aa27.21■■□□□ 1.95
GNB1-209ENST00000610897 TIAM1Q13009 1591 aa27.19■■□□□ 1.94
GNB1-209ENST00000610897 NCOA2Q15596 1464 aa27.19■■□□□ 1.94
GNB1-209ENST00000610897 ARID4BQ4LE39 1312 aaPredicted RBP27.19■■□□□ 1.94
GNB1-209ENST00000610897 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
GNB1-209ENST00000610897 POGKQ9P215 609 aa27.16■■□□□ 1.94
GNB1-209ENST00000610897 PLIN1O60240 522 aa27.15■■□□□ 1.94
GNB1-209ENST00000610897 KIF7Q2M1P5 1343 aa27.13■■□□□ 1.93
GNB1-209ENST00000610897 HSP90AA1P07900 732 aaKnown RBP27.12■■□□□ 1.93
GNB1-209ENST00000610897 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
GNB1-209ENST00000610897 AQRO60306 1485 aaKnown RBP eCLIP27.1■■□□□ 1.937e-7■■■■□ 25.8
GNB1-209ENST00000610897 KDM5BQ9UGL1 1544 aa27.1■■□□□ 1.93
GNB1-209ENST00000610897 TMC1Q8TDI8 760 aa27.1■■□□□ 1.93
GNB1-209ENST00000610897 L3MBTL2Q969R5 705 aa27.09■■□□□ 1.93
GNB1-209ENST00000610897 PNNQ9H307 717 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms