RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
COMMD7-204ENST00000610160 EFCAB5A4FU69 1503 aa35.55■■■■□ 3.28
COMMD7-204ENST00000610160 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
COMMD7-204ENST00000610160 SYNJ2O15056 1496 aa35.51■■■■□ 3.27
COMMD7-204ENST00000610160 TRIM26Q12899 539 aaPredicted RBP35.46■■■■□ 3.27
COMMD7-204ENST00000610160 IQGAP2Q13576 1575 aa35.44■■■■□ 3.26
COMMD7-204ENST00000610160 PCGF6Q9BYE7 350 aa35.44■■■■□ 3.26
COMMD7-204ENST00000610160 SAMD9Q5K651 1589 aa35.43■■■■□ 3.26
COMMD7-204ENST00000610160 PPARGC1BQ86YN6 1023 aaKnown RBP35.42■■■■□ 3.26
COMMD7-204ENST00000610160 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
COMMD7-204ENST00000610160 FHOD3Q2V2M9 1422 aa35.34■■■■□ 3.25
COMMD7-204ENST00000610160 KIAA0586Q9BVV6 1533 aa35.33■■■■□ 3.25
COMMD7-204ENST00000610160 CEP170Q5SW79 1584 aa35.31■■■■□ 3.24
COMMD7-204ENST00000610160 APLP2Q06481 763 aa35.28■■■■□ 3.24
COMMD7-204ENST00000610160 P3H3Q8IVL6 736 aa35.28■■■■□ 3.24
COMMD7-204ENST00000610160 UGGT2Q9NYU1 1516 aa35.26■■■■□ 3.24
COMMD7-204ENST00000610160 NUP160Q12769 1436 aa35.25■■■■□ 3.23
COMMD7-204ENST00000610160 FBLN2P98095 1184 aa35.24■■■■□ 3.23
COMMD7-204ENST00000610160 PCF11O94913 1555 aaKnown RBP35.22■■■■□ 3.23
COMMD7-204ENST00000610160 FMN1Q68DA7 1419 aa35.19■■■■□ 3.22
COMMD7-204ENST00000610160 CHD1O14646 1710 aa35.18■■■■□ 3.22
COMMD7-204ENST00000610160 TTBK1Q5TCY1 1321 aaPredicted RBP35.17■■■■□ 3.22
COMMD7-204ENST00000610160 FYCO1Q9BQS8 1478 aa35.15■■■■□ 3.22
COMMD7-204ENST00000610160 MAP3K1Q13233 1512 aa35.12■■■■□ 3.21
COMMD7-204ENST00000610160 CASKIN1Q8WXD9 1431 aa35.11■■■■□ 3.21
COMMD7-204ENST00000610160 KIAA0556O60303 1618 aa35.09■■■■□ 3.21
COMMD7-204ENST00000610160 TIAM1Q13009 1591 aa35.09■■■■□ 3.21
COMMD7-204ENST00000610160 DISP1Q96F81 1524 aa35.07■■■■□ 3.21
COMMD7-204ENST00000610160 CFAP43Q8NDM7 1665 aa35.06■■■■□ 3.2
COMMD7-204ENST00000610160 KANK4Q5T7N3 995 aaPredicted RBP34.98■■■■□ 3.19
COMMD7-204ENST00000610160 JPH4Q96JJ6 628 aa34.91■■■■□ 3.18
COMMD7-204ENST00000610160 LRRIQ1Q96JM4 1722 aa34.9■■■■□ 3.18
COMMD7-204ENST00000610160 LRRC9Q6ZRR7 1453 aa34.89■■■■□ 3.18
COMMD7-204ENST00000610160 ATP1B4Q9UN42 357 aaPredicted RBP34.89■■■■□ 3.18
COMMD7-204ENST00000610160 HECW1Q76N89 1606 aa34.87■■■■□ 3.17
COMMD7-204ENST00000610160 CARMIL2Q6F5E8 1435 aa34.87■■■■□ 3.17
COMMD7-204ENST00000610160 SHROOM2Q13796 1616 aa34.81■■■■□ 3.16
COMMD7-204ENST00000610160 CCDC18Q5T9S5 1454 aa34.78■■■■□ 3.16
COMMD7-204ENST00000610160 CLASP1Q7Z460 1538 aa34.75■■■■□ 3.15
COMMD7-204ENST00000610160 RAPGEF6Q8TEU7 1601 aa34.74■■■■□ 3.15
COMMD7-204ENST00000610160 PRG4Q92954 1404 aaPredicted RBP34.73■■■■□ 3.15
COMMD7-204ENST00000610160 EPRSP07814 1512 aaKnown RBP34.7■■■■□ 3.15
COMMD7-204ENST00000610160 RRBP1Q9P2E9 1410 aaKnown RBP34.65■■■■□ 3.14
COMMD7-204ENST00000610160 NUP153P49790 1475 aaKnown RBP34.64■■■■□ 3.14
COMMD7-204ENST00000610160 EHBP1L1Q8N3D4 1523 aa34.63■■■■□ 3.13
COMMD7-204ENST00000610160 CDK13Q14004 1512 aaKnown RBP34.62■■■■□ 3.13
COMMD7-204ENST00000610160 MTUS2Q5JR59 1369 aa34.62■■■■□ 3.13
COMMD7-204ENST00000610160 PLB1Q6P1J6 1458 aa34.61■■■■□ 3.13
COMMD7-204ENST00000610160 MAGI3Q5TCQ9 1506 aa34.58■■■■□ 3.13
COMMD7-204ENST00000610160 ABCA8O94911 1581 aa34.57■■■■□ 3.12
COMMD7-204ENST00000610160 PHLDB1Q86UU1 1377 aa34.56■■■■□ 3.12
COMMD7-204ENST00000610160 SUPT6HQ7KZ85 1726 aaKnown RBP34.54■■■■□ 3.12
COMMD7-204ENST00000610160 ERCC6L2Q5T890 1561 aa34.52■■■■□ 3.12
COMMD7-204ENST00000610160 CCNB3Q8WWL7 1395 aa34.52■■■■□ 3.12
COMMD7-204ENST00000610160 PTPRGP23470 1445 aa34.5■■■■□ 3.11
COMMD7-204ENST00000610160 NCOA2Q15596 1464 aa34.46■■■■□ 3.11
COMMD7-204ENST00000610160 ARID3CA6NKF2 412 aa34.45■■■■□ 3.11
COMMD7-204ENST00000610160 ARHGEF11O15085 1522 aa34.43■■■■□ 3.1
COMMD7-204ENST00000610160 HRCP23327 699 aa34.41■■■■□ 3.1
COMMD7-204ENST00000610160 HNRNPUL2Q1KMD3 747 aaKnown RBP34.39■■■■□ 3.1
COMMD7-204ENST00000610160 FGD6Q6ZV73 1430 aa34.33■■■■□ 3.09
COMMD7-204ENST00000610160 CDK11AQ9UQ88 783 aaPredicted RBP34.33■■■■□ 3.09
COMMD7-204ENST00000610160 MYOM3Q5VTT5 1437 aa34.33■■■■□ 3.09
COMMD7-204ENST00000610160 UACAQ9BZF9 1416 aa34.33■■■■□ 3.09
COMMD7-204ENST00000610160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.32■■■■□ 3.08
COMMD7-204ENST00000610160 OSCARQ8IYS5 282 aa34.31■■■■□ 3.08
COMMD7-204ENST00000610160 ATP10BO94823 1461 aa34.3■■■■□ 3.08
COMMD7-204ENST00000610160 TROQ12816 1431 aaPredicted RBP34.28■■■■□ 3.08
COMMD7-204ENST00000610160 ABCC2Q92887 1545 aa34.27■■■■□ 3.08
COMMD7-204ENST00000610160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.27■■■■□ 3.08
COMMD7-204ENST00000610160 ADCY10Q96PN6 1610 aa34.25■■■■□ 3.07
COMMD7-204ENST00000610160 FAM50AQ14320 339 aaKnown RBP34.2■■■■□ 3.07
COMMD7-204ENST00000610160 PTPN23Q9H3S7 1636 aa34.18■■■■□ 3.06
COMMD7-204ENST00000610160 UHRF1BP1LA0JNW5 1464 aa34.16■■■■□ 3.06
COMMD7-204ENST00000610160 KIF14Q15058 1648 aa34.16■■■■□ 3.06
COMMD7-204ENST00000610160 MIA2Q96PC5 1412 aa34.13■■■■□ 3.05
COMMD7-204ENST00000610160 ITGAEP38570 1179 aa34.12■■■■□ 3.05
COMMD7-204ENST00000610160 TCOF1Q13428 1488 aaKnown RBP34.12■■■■□ 3.05
COMMD7-204ENST00000610160 PLEKHD1A6NEE1 506 aa34.11■■■■□ 3.05
COMMD7-204ENST00000610160 ITSN2Q9NZM3 1697 aa34.08■■■■□ 3.05
COMMD7-204ENST00000610160 CCER1Q8TC90 406 aaPredicted RBP34.05■■■■□ 3.04
COMMD7-204ENST00000610160 ZCCHC11Q5TAX3 1644 aaKnown RBP34.04■■■■□ 3.04
COMMD7-204ENST00000610160 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
COMMD7-204ENST00000610160 ZEB1P37275 1124 aaPredicted RBP34.02■■■■□ 3.04
COMMD7-204ENST00000610160 ABCC10Q5T3U5 1492 aa34■■■■□ 3.03
COMMD7-204ENST00000610160 GPATCH8Q9UKJ3 1502 aaKnown RBP33.98■■■■□ 3.03
COMMD7-204ENST00000610160 CDC42BPAQ5VT25 1732 aa33.95■■■■□ 3.03
COMMD7-204ENST00000610160 PTPRKQ15262 1439 aa33.91■■■■□ 3.02
COMMD7-204ENST00000610160 SETD5Q9C0A6 1442 aa33.89■■■■□ 3.02
COMMD7-204ENST00000610160 RAB3GAP2Q9H2M9 1393 aa33.86■■■■□ 3.01
COMMD7-204ENST00000610160 CAMSAP2Q08AD1 1489 aa33.86■■■■□ 3.01
COMMD7-204ENST00000610160 CFDP1Q9UEE9 299 aaPredicted RBP33.85■■■■□ 3.01
COMMD7-204ENST00000610160 DNMT1P26358 1616 aaKnown RBP33.84■■■■□ 3.01
COMMD7-204ENST00000610160 TTC37Q6PGP7 1564 aa33.82■■■■□ 3.01
COMMD7-204ENST00000610160 PREX2Q70Z35 1606 aa33.82■■■■□ 3
COMMD7-204ENST00000610160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.81■■■■□ 3
COMMD7-204ENST00000610160 ZNF644Q9H582 1327 aaPredicted RBP33.79■■■■□ 3
COMMD7-204ENST00000610160 HFM1A2PYH4 1435 aa33.79■■■■□ 3
COMMD7-204ENST00000610160 DAPK1P53355 1430 aa33.77■■■■□ 3
COMMD7-204ENST00000610160 CDC42BPBQ9Y5S2 1711 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms