RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 TSPOAP1O95153 1857 aa23.31■■□□□ 1.32
LINC01278-206ENST00000610088 MAPKBP1O60336 1514 aa23.31■■□□□ 1.32
LINC01278-206ENST00000610088 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
LINC01278-206ENST00000610088 HECW2Q9P2P5 1572 aa23.29■■□□□ 1.32
LINC01278-206ENST00000610088 ADGRL1O94910 1474 aa23.29■■□□□ 1.32
LINC01278-206ENST00000610088 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
LINC01278-206ENST00000610088 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
LINC01278-206ENST00000610088 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
LINC01278-206ENST00000610088 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
LINC01278-206ENST00000610088 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.29
LINC01278-206ENST00000610088 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
LINC01278-206ENST00000610088 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
LINC01278-206ENST00000610088 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
LINC01278-206ENST00000610088 COL17A1Q9UMD9 1497 aaPredicted RBP22.95■■□□□ 1.26
LINC01278-206ENST00000610088 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
LINC01278-206ENST00000610088 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
LINC01278-206ENST00000610088 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
LINC01278-206ENST00000610088 PTPRGP23470 1445 aa22.88■■□□□ 1.25
LINC01278-206ENST00000610088 PLB1Q6P1J6 1458 aa22.87■■□□□ 1.25
LINC01278-206ENST00000610088 GLI2P10070 1586 aa22.87■■□□□ 1.25
LINC01278-206ENST00000610088 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
LINC01278-206ENST00000610088 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
LINC01278-206ENST00000610088 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
LINC01278-206ENST00000610088 KIAA0586Q9BVV6 1533 aa22.82■■□□□ 1.24
LINC01278-206ENST00000610088 TEX14Q8IWB6 1497 aa22.79■■□□□ 1.24
LINC01278-206ENST00000610088 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
LINC01278-206ENST00000610088 CUL7Q14999 1698 aa22.73■■□□□ 1.23
LINC01278-206ENST00000610088 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
LINC01278-206ENST00000610088 MAP3K4Q9Y6R4 1608 aa22.71■■□□□ 1.23
LINC01278-206ENST00000610088 SOCS7O14512 581 aa22.69■■□□□ 1.22
LINC01278-206ENST00000610088 ILDR2Q71H61 639 aa22.69■■□□□ 1.22
LINC01278-206ENST00000610088 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
LINC01278-206ENST00000610088 UHRF1BP1LA0JNW5 1464 aa22.64■■□□□ 1.21
LINC01278-206ENST00000610088 UACAQ9BZF9 1416 aa22.64■■□□□ 1.21
LINC01278-206ENST00000610088 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
LINC01278-206ENST00000610088 KIF21BO75037 1637 aa22.59■■□□□ 1.21
LINC01278-206ENST00000610088 IGF1RP08069 1367 aa22.59■■□□□ 1.21
LINC01278-206ENST00000610088 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
LINC01278-206ENST00000610088 PTPRMP28827 1452 aa22.55■■□□□ 1.2
LINC01278-206ENST00000610088 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
LINC01278-206ENST00000610088 CD109Q6YHK3 1445 aa22.5■■□□□ 1.19
LINC01278-206ENST00000610088 KCNH8Q96L42 1107 aa22.49■■□□□ 1.19
LINC01278-206ENST00000610088 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
LINC01278-206ENST00000610088 PCF11O94913 1555 aaKnown RBP22.48■■□□□ 1.19
LINC01278-206ENST00000610088 CERKQ8TCT0 537 aa22.48■■□□□ 1.19
LINC01278-206ENST00000610088 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
LINC01278-206ENST00000610088 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
LINC01278-206ENST00000610088 IQGAP2Q13576 1575 aa22.45■■□□□ 1.18
LINC01278-206ENST00000610088 DISP1Q96F81 1524 aa22.43■■□□□ 1.18
LINC01278-206ENST00000610088 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
LINC01278-206ENST00000610088 HSPA2P54652 639 aa22.42■■□□□ 1.18
LINC01278-206ENST00000610088 ADAMTSL3P82987 1691 aa22.41■■□□□ 1.18
LINC01278-206ENST00000610088 ARID4BQ4LE39 1312 aaPredicted RBP22.39■■□□□ 1.18
LINC01278-206ENST00000610088 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
LINC01278-206ENST00000610088 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
LINC01278-206ENST00000610088 MADDQ8WXG6 1647 aa22.31■■□□□ 1.16
LINC01278-206ENST00000610088 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
LINC01278-206ENST00000610088 RAPGEF3O95398 923 aa22.28■■□□□ 1.16
LINC01278-206ENST00000610088 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
LINC01278-206ENST00000610088 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.16
LINC01278-206ENST00000610088 KIAA0556O60303 1618 aa22.25■■□□□ 1.15
LINC01278-206ENST00000610088 UGGT2Q9NYU1 1516 aa22.25■■□□□ 1.15
LINC01278-206ENST00000610088 RIMS1Q86UR5 1692 aaKnown RBP22.21■■□□□ 1.15
LINC01278-206ENST00000610088 ARID3CA6NKF2 412 aa22.18■■□□□ 1.14
LINC01278-206ENST00000610088 PHLDB1Q86UU1 1377 aa22.15■■□□□ 1.14
LINC01278-206ENST00000610088 ABCA8O94911 1581 aa22.11■■□□□ 1.13
LINC01278-206ENST00000610088 RAPGEF2Q9Y4G8 1499 aa22.08■■□□□ 1.12
LINC01278-206ENST00000610088 FRMPD1Q5SYB0 1578 aa22.05■■□□□ 1.12
LINC01278-206ENST00000610088 MLECQ14165 292 aa22.05■■□□□ 1.12
LINC01278-206ENST00000610088 NEO1Q92859 1461 aa22.04■■□□□ 1.12
LINC01278-206ENST00000610088 POGZQ7Z3K3 1410 aa22.03■■□□□ 1.12
LINC01278-206ENST00000610088 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
LINC01278-206ENST00000610088 ARHGEF40Q8TER5 1519 aa22.01■■□□□ 1.11
LINC01278-206ENST00000610088 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
LINC01278-206ENST00000610088 ABCA9Q8IUA7 1624 aa22.01■■□□□ 1.11
LINC01278-206ENST00000610088 YEATS2Q9ULM3 1422 aa21.98■■□□□ 1.11
LINC01278-206ENST00000610088 FANCAO15360 1455 aa21.97■■□□□ 1.11
LINC01278-206ENST00000610088 ATP10BO94823 1461 aa21.97■■□□□ 1.11
LINC01278-206ENST00000610088 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
LINC01278-206ENST00000610088 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
LINC01278-206ENST00000610088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
LINC01278-206ENST00000610088 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
LINC01278-206ENST00000610088 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
LINC01278-206ENST00000610088 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
LINC01278-206ENST00000610088 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
LINC01278-206ENST00000610088 FER1L4A9Z1Z3 1794 aa21.88■■□□□ 1.09
LINC01278-206ENST00000610088 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
LINC01278-206ENST00000610088 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
LINC01278-206ENST00000610088 CTTNBP2Q8WZ74 1663 aa21.87■■□□□ 1.09
LINC01278-206ENST00000610088 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
LINC01278-206ENST00000610088 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
LINC01278-206ENST00000610088 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
LINC01278-206ENST00000610088 ZFYVE16Q7Z3T8 1539 aa21.85■■□□□ 1.09
LINC01278-206ENST00000610088 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
LINC01278-206ENST00000610088 UHRF1BP1Q6BDS2 1440 aa21.81■■□□□ 1.08
LINC01278-206ENST00000610088 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
LINC01278-206ENST00000610088 PTPRTO14522 1441 aa21.8■■□□□ 1.08
LINC01278-206ENST00000610088 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.07
LINC01278-206ENST00000610088 ZMYM4Q5VZL5 1548 aa21.76■■□□□ 1.07
LINC01278-206ENST00000610088 UBAP1LF5GYI3 381 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms