RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
ATXN2-226ENST00000608853 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
ATXN2-226ENST00000608853 SOGA1O94964 1423 aa16.47■□□□□ 0.23
ATXN2-226ENST00000608853 HSP90AA1P07900 732 aaKnown RBP16.47■□□□□ 0.23
ATXN2-226ENST00000608853 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
ATXN2-226ENST00000608853 NEFMP07197 916 aa16.45■□□□□ 0.22
ATXN2-226ENST00000608853 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
ATXN2-226ENST00000608853 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
ATXN2-226ENST00000608853 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
ATXN2-226ENST00000608853 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
ATXN2-226ENST00000608853 ARXQ96QS3 562 aa16.44■□□□□ 0.22
ATXN2-226ENST00000608853 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
ATXN2-226ENST00000608853 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
ATXN2-226ENST00000608853 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
ATXN2-226ENST00000608853 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATXN2-226ENST00000608853 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
ATXN2-226ENST00000608853 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
ATXN2-226ENST00000608853 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
ATXN2-226ENST00000608853 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
ATXN2-226ENST00000608853 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
ATXN2-226ENST00000608853 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
ATXN2-226ENST00000608853 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
ATXN2-226ENST00000608853 TSPY4P0CV99 314 aa16.33■□□□□ 0.2
ATXN2-226ENST00000608853 TSPY10P0CW01 314 aa16.33■□□□□ 0.2
ATXN2-226ENST00000608853 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
ATXN2-226ENST00000608853 BECN1Q14457 450 aa16.31■□□□□ 0.2
ATXN2-226ENST00000608853 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
ATXN2-226ENST00000608853 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
ATXN2-226ENST00000608853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■□□□ 13.5
ATXN2-226ENST00000608853 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
ATXN2-226ENST00000608853 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.19
ATXN2-226ENST00000608853 NACADO15069 1562 aa16.26■□□□□ 0.19
ATXN2-226ENST00000608853 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
ATXN2-226ENST00000608853 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
ATXN2-226ENST00000608853 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
ATXN2-226ENST00000608853 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
ATXN2-226ENST00000608853 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
ATXN2-226ENST00000608853 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
ATXN2-226ENST00000608853 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
ATXN2-226ENST00000608853 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
ATXN2-226ENST00000608853 HSPA5P11021 654 aaKnown RBP16.19■□□□□ 0.18
ATXN2-226ENST00000608853 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
ATXN2-226ENST00000608853 TRIM44Q96DX7 344 aaPredicted RBP16.19■□□□□ 0.18
ATXN2-226ENST00000608853 PPP1R15AO75807 674 aaPredicted RBP16.18■□□□□ 0.18
ATXN2-226ENST00000608853 RGS3P49796 1198 aa16.18■□□□□ 0.18
ATXN2-226ENST00000608853 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
ATXN2-226ENST00000608853 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
ATXN2-226ENST00000608853 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
ATXN2-226ENST00000608853 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
ATXN2-226ENST00000608853 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
ATXN2-226ENST00000608853 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
ATXN2-226ENST00000608853 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
ATXN2-226ENST00000608853 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
ATXN2-226ENST00000608853 CDCA8Q53HL2 280 aa16.07■□□□□ 0.16
ATXN2-226ENST00000608853 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
ATXN2-226ENST00000608853 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
ATXN2-226ENST00000608853 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
ATXN2-226ENST00000608853 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
ATXN2-226ENST00000608853 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
ATXN2-226ENST00000608853 CUX2O14529 1486 aa16.03■□□□□ 0.16
ATXN2-226ENST00000608853 RCAN3Q9UKA8 241 aa16.02■□□□□ 0.16
ATXN2-226ENST00000608853 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
ATXN2-226ENST00000608853 NEUROD2Q15784 382 aa16.02■□□□□ 0.15
ATXN2-226ENST00000608853 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.15
ATXN2-226ENST00000608853 FRAT1Q92837 279 aaPredicted RBP16.01■□□□□ 0.15
ATXN2-226ENST00000608853 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
ATXN2-226ENST00000608853 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
ATXN2-226ENST00000608853 FOXD1Q16676 465 aa16■□□□□ 0.15
ATXN2-226ENST00000608853 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
ATXN2-226ENST00000608853 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
ATXN2-226ENST00000608853 WIZO95785 1651 aa15.99■□□□□ 0.15
ATXN2-226ENST00000608853 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
ATXN2-226ENST00000608853 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
ATXN2-226ENST00000608853 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
ATXN2-226ENST00000608853 RUSC2Q8N2Y8 1516 aa15.98■□□□□ 0.15
ATXN2-226ENST00000608853 L1TD1Q5T7N2 865 aaKnown RBP15.96■□□□□ 0.15
ATXN2-226ENST00000608853 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
ATXN2-226ENST00000608853 L3MBTL2Q969R5 705 aa15.95■□□□□ 0.14
ATXN2-226ENST00000608853 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
ATXN2-226ENST00000608853 TMF1P82094 1093 aa15.93■□□□□ 0.14
ATXN2-226ENST00000608853 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
ATXN2-226ENST00000608853 PTMAP06454 111 aaKnown RBP15.92■□□□□ 0.14
ATXN2-226ENST00000608853 FMN1Q68DA7 1419 aa15.92■□□□□ 0.14
ATXN2-226ENST00000608853 RALBP1Q15311 655 aa15.91■□□□□ 0.14
ATXN2-226ENST00000608853 KTN1Q86UP2 1357 aaKnown RBP15.91■□□□□ 0.14
ATXN2-226ENST00000608853 PKD2Q13563 968 aa15.9■□□□□ 0.14
ATXN2-226ENST00000608853 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
ATXN2-226ENST00000608853 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
ATXN2-226ENST00000608853 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
ATXN2-226ENST00000608853 ZBED9Q6R2W3 1325 aa15.88■□□□□ 0.13
ATXN2-226ENST00000608853 DNTTIP2Q5QJE6 756 aaKnown RBP15.88■□□□□ 0.13
ATXN2-226ENST00000608853 MS4A1P11836 297 aa15.87■□□□□ 0.13
ATXN2-226ENST00000608853 HSCBQ8IWL3 235 aa15.87■□□□□ 0.13
ATXN2-226ENST00000608853 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
ATXN2-226ENST00000608853 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
ATXN2-226ENST00000608853 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
ATXN2-226ENST00000608853 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
ATXN2-226ENST00000608853 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
ATXN2-226ENST00000608853 NLRP13Q86W25 1043 aa15.83■□□□□ 0.13
ATXN2-226ENST00000608853 PDE4AP27815 886 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms