RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 RSF1Q96T23 1441 aaPredicted RBP5.28□□□□□ -1.56
LINC01278-202ENST00000608623 NEFMP07197 916 aa5.27□□□□□ -1.57
LINC01278-202ENST00000608623 CHIC2Q9UKJ5 165 aa5.27□□□□□ -1.57
LINC01278-202ENST00000608623 KCNA4P22459 653 aa5.27□□□□□ -1.57
LINC01278-202ENST00000608623 EFCAB2Q5VUJ9 269 aa5.27□□□□□ -1.57
LINC01278-202ENST00000608623 WRNQ14191 1432 aaPredicted RBP eCLIP5.27□□□□□ -1.57
LINC01278-202ENST00000608623 BAZ1AQ9NRL2 1556 aaPredicted RBP5.27□□□□□ -1.57
LINC01278-202ENST00000608623 ARXQ96QS3 562 aa5.26□□□□□ -1.57
LINC01278-202ENST00000608623 DMRT2Q9Y5R5 561 aa5.26□□□□□ -1.57
LINC01278-202ENST00000608623 FANCD2Q9BXW9 1451 aa5.26□□□□□ -1.57
LINC01278-202ENST00000608623 MTUS2Q5JR59 1369 aa5.26□□□□□ -1.57
LINC01278-202ENST00000608623 PTPRGP23470 1445 aa5.25□□□□□ -1.57
LINC01278-202ENST00000608623 CUX2O14529 1486 aa5.24□□□□□ -1.57
LINC01278-202ENST00000608623 UBAP1LF5GYI3 381 aa5.24□□□□□ -1.57
LINC01278-202ENST00000608623 KIF27Q86VH2 1401 aa5.24□□□□□ -1.57
LINC01278-202ENST00000608623 ATAD2BQ9ULI0 1458 aa5.23□□□□□ -1.57
LINC01278-202ENST00000608623 MSH5O43196 834 aa5.22□□□□□ -1.57
LINC01278-202ENST00000608623 NUTM2BA6NNL0 878 aaPredicted RBP5.22□□□□□ -1.57
LINC01278-202ENST00000608623 NUTM2EB1AL46 878 aaPredicted RBP5.22□□□□□ -1.57
LINC01278-202ENST00000608623 NUTM2AQ8IVF1 878 aaPredicted RBP5.22□□□□□ -1.57
LINC01278-202ENST00000608623 POGKQ9P215 609 aa5.22□□□□□ -1.57
LINC01278-202ENST00000608623 MRC2Q9UBG0 1479 aa5.22□□□□□ -1.57
LINC01278-202ENST00000608623 NUTM2DQ5VT03 806 aaPredicted RBP5.22□□□□□ -1.57
LINC01278-202ENST00000608623 NESP48681 1621 aa5.21□□□□□ -1.58
LINC01278-202ENST00000608623 CCER1Q8TC90 406 aaPredicted RBP5.21□□□□□ -1.58
LINC01278-202ENST00000608623 WASHC2CQ9Y4E1 1318 aa5.2□□□□□ -1.58
LINC01278-202ENST00000608623 KANK1Q14678 1352 aa5.2□□□□□ -1.58
LINC01278-202ENST00000608623 PAK3O75914 559 aaPredicted RBP5.2□□□□□ -1.58
LINC01278-202ENST00000608623 CSB-PGBD3P0DP91 1061 aa5.2□□□□□ -1.58
LINC01278-202ENST00000608623 PELP1Q8IZL8 1130 aaKnown RBP5.2□□□□□ -1.58
LINC01278-202ENST00000608623 AQRO60306 1485 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC01278-202ENST00000608623 ATF3P18847 181 aa5.2□□□□□ -1.58
LINC01278-202ENST00000608623 PPP1R1BQ9UD71 204 aaPredicted RBP5.2□□□□□ -1.58
LINC01278-202ENST00000608623 CARMIL1Q5VZK9 1371 aa5.19□□□□□ -1.58
LINC01278-202ENST00000608623 KIF3BO15066 747 aa5.19□□□□□ -1.58
LINC01278-202ENST00000608623 NEUROD1Q13562 356 aa5.19□□□□□ -1.58
LINC01278-202ENST00000608623 ABCC8Q09428 1581 aa5.19□□□□□ -1.58
LINC01278-202ENST00000608623 POGZQ7Z3K3 1410 aa5.18□□□□□ -1.58
LINC01278-202ENST00000608623 TOM1O60784 492 aa5.18□□□□□ -1.58
LINC01278-202ENST00000608623 CLIP1P30622 1438 aa5.18□□□□□ -1.58
LINC01278-202ENST00000608623 DISP3Q9P2K9 1392 aa5.18□□□□□ -1.58
LINC01278-202ENST00000608623 SPAG9O60271 1321 aaKnown RBP5.17□□□□□ -1.58
LINC01278-202ENST00000608623 KDM2AQ9Y2K7 1162 aa5.17□□□□□ -1.58
LINC01278-202ENST00000608623 SOX12O15370 315 aa5.17□□□□□ -1.58
LINC01278-202ENST00000608623 EVA1CP58658 441 aa5.17□□□□□ -1.58
LINC01278-202ENST00000608623 RGL3Q3MIN7 710 aa5.17□□□□□ -1.58
LINC01278-202ENST00000608623 PROSER2Q86WR7 435 aaPredicted RBP5.17□□□□□ -1.58
LINC01278-202ENST00000608623 LOC105371045A0A1W2PR82 267 aa5.16□□□□□ -1.58
LINC01278-202ENST00000608623 NCAPD3P42695 1498 aa5.16□□□□□ -1.58
LINC01278-202ENST00000608623 CCNB3Q8WWL7 1395 aa5.16□□□□□ -1.58
LINC01278-202ENST00000608623 STK26Q9P289 416 aa5.14□□□□□ -1.59
LINC01278-202ENST00000608623 IFT140Q96RY7 1462 aa5.14□□□□□ -1.59
LINC01278-202ENST00000608623 NUTM2FA1L443 756 aa5.14□□□□□ -1.59
LINC01278-202ENST00000608623 HSPA2P54652 639 aa5.14□□□□□ -1.59
LINC01278-202ENST00000608623 TMC1Q8TDI8 760 aa5.14□□□□□ -1.59
LINC01278-202ENST00000608623 TMX4Q9H1E5 349 aaPredicted RBP5.14□□□□□ -1.59
LINC01278-202ENST00000608623 PRG4Q92954 1404 aaPredicted RBP5.14□□□□□ -1.59
LINC01278-202ENST00000608623 SAFB2Q14151 953 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC01278-202ENST00000608623 RRP7BPQ9NSQ0 103 aa5.14□□□□□ -1.59
LINC01278-202ENST00000608623 MROH2BQ7Z745 1585 aa5.13□□□□□ -1.59
LINC01278-202ENST00000608623 ANKLE2Q86XL3 938 aa5.13□□□□□ -1.59
LINC01278-202ENST00000608623 BCL11AQ9H165 835 aa5.13□□□□□ -1.59
LINC01278-202ENST00000608623 THEMISQ8N1K5 641 aaPredicted RBP5.12□□□□□ -1.59
LINC01278-202ENST00000608623 RAPGEF3O95398 923 aa5.12□□□□□ -1.59
LINC01278-202ENST00000608623 GAPVD1Q14C86 1478 aa5.12□□□□□ -1.59
LINC01278-202ENST00000608623 PPM1GO15355 546 aaPredicted RBP5.12□□□□□ -1.59
LINC01278-202ENST00000608623 MYO15BQ96JP2 1530 aa5.11□□□□□ -1.59
LINC01278-202ENST00000608623 DCAF1Q9Y4B6 1507 aa5.11□□□□□ -1.59
LINC01278-202ENST00000608623 NGDNQ8NEJ9 315 aaKnown RBP5.11□□□□□ -1.59
LINC01278-202ENST00000608623 HNRNPMP52272 730 aaKnown RBP eCLIP5.11□□□□□ -1.59
LINC01278-202ENST00000608623 GRIN2BQ13224 1484 aa5.1□□□□□ -1.59
LINC01278-202ENST00000608623 NGLY1Q96IV0 654 aa5.1□□□□□ -1.59
LINC01278-202ENST00000608623 RAD54L2Q9Y4B4 1467 aa5.1□□□□□ -1.59
LINC01278-202ENST00000608623 TXNDC2Q86VQ3 553 aa5.09□□□□□ -1.59
LINC01278-202ENST00000608623 TNIKQ9UKE5 1360 aa5.09□□□□□ -1.59
LINC01278-202ENST00000608623 CEBPAP49715 358 aaPredicted RBP5.08□□□□□ -1.6
LINC01278-202ENST00000608623 ZNF330Q9Y3S2 320 aaPredicted RBP5.08□□□□□ -1.6
LINC01278-202ENST00000608623 ADAMTS2O95450 1211 aa5.08□□□□□ -1.6
LINC01278-202ENST00000608623 SRPK2P78362 688 aaKnown RBP5.08□□□□□ -1.6
LINC01278-202ENST00000608623 ZBTB47Q9UFB7 747 aaPredicted RBP5.08□□□□□ -1.6
LINC01278-202ENST00000608623 CCDC88BA6NC98 1476 aa5.08□□□□□ -1.6
LINC01278-202ENST00000608623 LMTK3Q96Q04 1460 aa5.08□□□□□ -1.6
LINC01278-202ENST00000608623 CFAP44Q96MT7 982 aa5.07□□□□□ -1.6
LINC01278-202ENST00000608623 SYTL4Q96C24 671 aaPredicted RBP5.07□□□□□ -1.6
LINC01278-202ENST00000608623 PSME1Q06323 249 aa5.07□□□□□ -1.6
LINC01278-202ENST00000608623 USP35Q9P2H5 1018 aa5.07□□□□□ -1.6
LINC01278-202ENST00000608623 SNAPC4Q5SXM2 1469 aa5.07□□□□□ -1.6
LINC01278-202ENST00000608623 GOLGA3Q08378 1498 aa5.06□□□□□ -1.6
LINC01278-202ENST00000608623 G3V3G9 751 aa5.05□□□□□ -1.6
LINC01278-202ENST00000608623 PDE3BQ13370 1112 aa5.05□□□□□ -1.6
LINC01278-202ENST00000608623 DCAF8Q5TAQ9 597 aa5.05□□□□□ -1.6
LINC01278-202ENST00000608623 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.05□□□□□ -1.6
LINC01278-202ENST00000608623 SMARCA4P51532 1647 aa5.05□□□□□ -1.6
LINC01278-202ENST00000608623 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINC01278-202ENST00000608623 FGD5Q6ZNL6 1462 aa5.04□□□□□ -1.6
LINC01278-202ENST00000608623 FHAD1B1AJZ9 1412 aa5.04□□□□□ -1.6
LINC01278-202ENST00000608623 CD109Q6YHK3 1445 aa5.04□□□□□ -1.6
LINC01278-202ENST00000608623 GTF2E1P29083 439 aaPredicted RBP5.04□□□□□ -1.6
LINC01278-202ENST00000608623 RSPH4AQ5TD94 716 aa5.03□□□□□ -1.6
LINC01278-202ENST00000608623 AFAP1Q8N556 730 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms