RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 FHAD1B1AJZ9 1412 aa29.83■■■□□ 2.37
TUBB4B-202ENST00000604929 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
TUBB4B-202ENST00000604929 APLP2Q06481 763 aa29.81■■■□□ 2.36
TUBB4B-202ENST00000604929 ADAMTS12P58397 1594 aa29.75■■■□□ 2.35
TUBB4B-202ENST00000604929 SNAPC4Q5SXM2 1469 aa29.74■■■□□ 2.35
TUBB4B-202ENST00000604929 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
TUBB4B-202ENST00000604929 FBLN2P98095 1184 aa29.67■■■□□ 2.34
TUBB4B-202ENST00000604929 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
TUBB4B-202ENST00000604929 FHOD3Q2V2M9 1422 aa29.62■■■□□ 2.33
TUBB4B-202ENST00000604929 MAGI1Q96QZ7 1491 aaPredicted RBP29.59■■■□□ 2.33
TUBB4B-202ENST00000604929 ATP1B4Q9UN42 357 aaPredicted RBP29.56■■■□□ 2.32
TUBB4B-202ENST00000604929 KANK4Q5T7N3 995 aaPredicted RBP29.55■■■□□ 2.32
TUBB4B-202ENST00000604929 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
TUBB4B-202ENST00000604929 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
TUBB4B-202ENST00000604929 SYNJ2O15056 1496 aa29.52■■■□□ 2.32
TUBB4B-202ENST00000604929 IQGAP2Q13576 1575 aa29.49■■■□□ 2.31
TUBB4B-202ENST00000604929 SAMD9Q5K651 1589 aa29.45■■■□□ 2.3
TUBB4B-202ENST00000604929 KIAA0586Q9BVV6 1533 aa29.43■■■□□ 2.3
TUBB4B-202ENST00000604929 FMN1Q68DA7 1419 aa29.39■■■□□ 2.3
TUBB4B-202ENST00000604929 PCF11O94913 1555 aaKnown RBP29.38■■■□□ 2.29
TUBB4B-202ENST00000604929 CEP170Q5SW79 1584 aa29.36■■■□□ 2.29
TUBB4B-202ENST00000604929 CASKIN1Q8WXD9 1431 aa29.34■■■□□ 2.29
TUBB4B-202ENST00000604929 HRCP23327 699 aa29.32■■■□□ 2.28
TUBB4B-202ENST00000604929 UGGT2Q9NYU1 1516 aa29.31■■■□□ 2.28
TUBB4B-202ENST00000604929 TIAM1Q13009 1591 aa29.3■■■□□ 2.28
TUBB4B-202ENST00000604929 FYCO1Q9BQS8 1478 aa29.3■■■□□ 2.28
TUBB4B-202ENST00000604929 NUP160Q12769 1436 aa29.29■■■□□ 2.28
TUBB4B-202ENST00000604929 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
TUBB4B-202ENST00000604929 MAP3K1Q13233 1512 aa29.26■■■□□ 2.27
TUBB4B-202ENST00000604929 DISP1Q96F81 1524 aa29.24■■■□□ 2.27
TUBB4B-202ENST00000604929 LRRC9Q6ZRR7 1453 aa29.22■■■□□ 2.27
TUBB4B-202ENST00000604929 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
TUBB4B-202ENST00000604929 KIAA0556O60303 1618 aa29.18■■■□□ 2.26
TUBB4B-202ENST00000604929 CHD1O14646 1710 aa29.16■■■□□ 2.26
TUBB4B-202ENST00000604929 ARID3CA6NKF2 412 aa29.15■■■□□ 2.26
TUBB4B-202ENST00000604929 CFAP43Q8NDM7 1665 aa29.14■■■□□ 2.26
TUBB4B-202ENST00000604929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.1■■■□□ 2.25
TUBB4B-202ENST00000604929 LRRIQ1Q96JM4 1722 aa29.1■■■□□ 2.25
TUBB4B-202ENST00000604929 CARMIL2Q6F5E8 1435 aa29.09■■■□□ 2.25
TUBB4B-202ENST00000604929 MTUS2Q5JR59 1369 aa29.06■■■□□ 2.24
TUBB4B-202ENST00000604929 PHLDB1Q86UU1 1377 aa29.04■■■□□ 2.24
TUBB4B-202ENST00000604929 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
TUBB4B-202ENST00000604929 CCNB3Q8WWL7 1395 aa29.01■■■□□ 2.23
TUBB4B-202ENST00000604929 HECW1Q76N89 1606 aa29■■■□□ 2.23
TUBB4B-202ENST00000604929 PRG4Q92954 1404 aaPredicted RBP29■■■□□ 2.23
TUBB4B-202ENST00000604929 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
TUBB4B-202ENST00000604929 ITGAEP38570 1179 aa28.98■■■□□ 2.23
TUBB4B-202ENST00000604929 CCDC18Q5T9S5 1454 aa28.97■■■□□ 2.23
TUBB4B-202ENST00000604929 CDK13Q14004 1512 aaKnown RBP28.96■■■□□ 2.23
TUBB4B-202ENST00000604929 CCER1Q8TC90 406 aaPredicted RBP28.96■■■□□ 2.23
TUBB4B-202ENST00000604929 PLB1Q6P1J6 1458 aa28.94■■■□□ 2.22
TUBB4B-202ENST00000604929 FAM50AQ14320 339 aaKnown RBP28.92■■■□□ 2.22
TUBB4B-202ENST00000604929 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
TUBB4B-202ENST00000604929 NUP153P49790 1475 aaKnown RBP28.91■■■□□ 2.22
TUBB4B-202ENST00000604929 MAGI3Q5TCQ9 1506 aa28.91■■■□□ 2.22
TUBB4B-202ENST00000604929 PTPRGP23470 1445 aa28.85■■■□□ 2.21
TUBB4B-202ENST00000604929 NCOA2Q15596 1464 aa28.85■■■□□ 2.21
TUBB4B-202ENST00000604929 EHBP1L1Q8N3D4 1523 aa28.84■■■□□ 2.21
TUBB4B-202ENST00000604929 ZEB1P37275 1124 aaPredicted RBP28.83■■■□□ 2.21
TUBB4B-202ENST00000604929 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
TUBB4B-202ENST00000604929 SUPT6HQ7KZ85 1726 aaKnown RBP28.79■■■□□ 2.2
TUBB4B-202ENST00000604929 CDK11AQ9UQ88 783 aaPredicted RBP28.79■■■□□ 2.2
TUBB4B-202ENST00000604929 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
TUBB4B-202ENST00000604929 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.2
TUBB4B-202ENST00000604929 FGD6Q6ZV73 1430 aa28.75■■■□□ 2.19
TUBB4B-202ENST00000604929 ABCA8O94911 1581 aa28.74■■■□□ 2.19
TUBB4B-202ENST00000604929 MYOM3Q5VTT5 1437 aa28.73■■■□□ 2.19
TUBB4B-202ENST00000604929 ARHGEF11O15085 1522 aa28.69■■■□□ 2.18
TUBB4B-202ENST00000604929 ATP10BO94823 1461 aa28.67■■■□□ 2.18
TUBB4B-202ENST00000604929 OSCARQ8IYS5 282 aa28.66■■■□□ 2.18
TUBB4B-202ENST00000604929 PLEKHD1A6NEE1 506 aa28.65■■■□□ 2.18
TUBB4B-202ENST00000604929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.64■■■□□ 2.171e-6■□□□□ 10.4
TUBB4B-202ENST00000604929 UACAQ9BZF9 1416 aa28.64■■■□□ 2.17
TUBB4B-202ENST00000604929 TROQ12816 1431 aaPredicted RBP28.62■■■□□ 2.17
TUBB4B-202ENST00000604929 PTPN23Q9H3S7 1636 aa28.56■■■□□ 2.16
TUBB4B-202ENST00000604929 RAB3GAP2Q9H2M9 1393 aa28.52■■■□□ 2.16
TUBB4B-202ENST00000604929 PTPRKQ15262 1439 aa28.52■■■□□ 2.16
TUBB4B-202ENST00000604929 MIA2Q96PC5 1412 aa28.51■■■□□ 2.15
TUBB4B-202ENST00000604929 SETD5Q9C0A6 1442 aa28.51■■■□□ 2.15
TUBB4B-202ENST00000604929 KIF14Q15058 1648 aa28.5■■■□□ 2.15
TUBB4B-202ENST00000604929 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
TUBB4B-202ENST00000604929 ABCC2Q92887 1545 aa28.47■■■□□ 2.15
TUBB4B-202ENST00000604929 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
TUBB4B-202ENST00000604929 CHIC2Q9UKJ5 165 aa28.47■■■□□ 2.15
TUBB4B-202ENST00000604929 TCOF1Q13428 1488 aaKnown RBP28.46■■■□□ 2.15
TUBB4B-202ENST00000604929 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
TUBB4B-202ENST00000604929 ZNF777Q9ULD5 760 aaPredicted RBP28.45■■■□□ 2.14
TUBB4B-202ENST00000604929 GPATCH8Q9UKJ3 1502 aaKnown RBP28.42■■■□□ 2.14
TUBB4B-202ENST00000604929 ADCY10Q96PN6 1610 aa28.41■■■□□ 2.14
TUBB4B-202ENST00000604929 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
TUBB4B-202ENST00000604929 RRP7BPQ9NSQ0 103 aa28.37■■■□□ 2.13
TUBB4B-202ENST00000604929 UHRF1BP1LA0JNW5 1464 aa28.34■■■□□ 2.13
TUBB4B-202ENST00000604929 ABCC10Q5T3U5 1492 aa28.34■■■□□ 2.13
TUBB4B-202ENST00000604929 HFM1A2PYH4 1435 aa28.3■■■□□ 2.12
TUBB4B-202ENST00000604929 ITSN2Q9NZM3 1697 aa28.3■■■□□ 2.12
TUBB4B-202ENST00000604929 KDM5BQ9UGL1 1544 aa28.29■■■□□ 2.12
TUBB4B-202ENST00000604929 ZCCHC11Q5TAX3 1644 aaKnown RBP28.29■■■□□ 2.12
TUBB4B-202ENST00000604929 NAIPQ13075 1403 aa28.28■■■□□ 2.12
TUBB4B-202ENST00000604929 CAMSAP2Q08AD1 1489 aa28.28■■■□□ 2.12
TUBB4B-202ENST00000604929 DAPK1P53355 1430 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms