RNA–Protein interactions for RNA: ENST00000604864.5

NEB-219, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-219ENST00000604864 IPO9Q96P70 1041 aaKnown RBP4.42□□□□□ -1.7
NEB-219ENST00000604864 BAZ1AQ9NRL2 1556 aaPredicted RBP4.42□□□□□ -1.7
NEB-219ENST00000604864 SMARCA2P51531 1590 aa4.42□□□□□ -1.7
NEB-219ENST00000604864 GSE1Q14687 1217 aa4.42□□□□□ -1.7
NEB-219ENST00000604864 TCERG1O14776 1098 aaKnown RBP4.42□□□□□ -1.7
NEB-219ENST00000604864 HAP1P54257 671 aaPredicted RBP4.42□□□□□ -1.7
NEB-219ENST00000604864 DEKP35659 375 aaKnown RBP4.42□□□□□ -1.7
NEB-219ENST00000604864 MYH16Q9H6N6 1097 aa4.41□□□□□ -1.7
NEB-219ENST00000604864 CHIC1Q5VXU3 224 aa4.41□□□□□ -1.7
NEB-219ENST00000604864 SUPT16HQ9Y5B9 1047 aaKnown RBP4.41□□□□□ -1.7
NEB-219ENST00000604864 DDX10Q13206 875 aaKnown RBP4.41□□□□□ -1.7
NEB-219ENST00000604864 DNTTIP2Q5QJE6 756 aaKnown RBP4.4□□□□□ -1.7
NEB-219ENST00000604864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.4□□□□□ -1.71
NEB-219ENST00000604864 IL27Q8NEV9 243 aa4.4□□□□□ -1.71
NEB-219ENST00000604864 CHAF1AQ13111 956 aaPredicted RBP4.4□□□□□ -1.71
NEB-219ENST00000604864 PDIA4P13667 645 aaKnown RBP4.39□□□□□ -1.71
NEB-219ENST00000604864 HNRNPUL2Q1KMD3 747 aaKnown RBP4.39□□□□□ -1.71
NEB-219ENST00000604864 PDCL2Q8N4E4 241 aa4.39□□□□□ -1.71
NEB-219ENST00000604864 HDAC5Q9UQL6 1122 aa4.38□□□□□ -1.71
NEB-219ENST00000604864 BCL11AQ9H165 835 aa4.38□□□□□ -1.71
NEB-219ENST00000604864 TUBB4BP68371 445 aa4.38□□□□□ -1.71
NEB-219ENST00000604864 CALD1Q05682 793 aaKnown RBP4.38□□□□□ -1.71
NEB-219ENST00000604864 GPS2Q13227 327 aa4.38□□□□□ -1.71
NEB-219ENST00000604864 TEX35Q5T0J7 233 aa4.38□□□□□ -1.71
NEB-219ENST00000604864 GOLGA6L6A8MZA4 724 aa4.38□□□□□ -1.71
NEB-219ENST00000604864 NOM1Q5C9Z4 860 aaKnown RBP4.38□□□□□ -1.71
NEB-219ENST00000604864 HMGB1P09429 215 aaKnown RBP4.37□□□□□ -1.71
NEB-219ENST00000604864 IPO8O15397 1037 aaKnown RBP4.37□□□□□ -1.71
NEB-219ENST00000604864 PDCL3Q9H2J4 239 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 FAM50AQ14320 339 aaKnown RBP4.37□□□□□ -1.71
NEB-219ENST00000604864 TRIM52Q96A61 297 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
NEB-219ENST00000604864 CASC1Q6TDU7 716 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 STK11IPQ8N1F8 1099 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 FAM43AQ8N2R8 423 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 CCER2I3L3R5 266 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 NBR1Q14596 966 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 SETQ01105 290 aaPredicted RBP4.37□□□□□ -1.71
NEB-219ENST00000604864 KIAA2012Q0VF49 1180 aa4.37□□□□□ -1.71
NEB-219ENST00000604864 LETM1O95202 739 aaPredicted RBP4.37□□□□□ -1.71
NEB-219ENST00000604864 TPM3P06753 285 aa4.36□□□□□ -1.71
NEB-219ENST00000604864 GOLGA3Q08378 1498 aa4.36□□□□□ -1.71
NEB-219ENST00000604864 RTN4Q9NQC3 1192 aaKnown RBP4.36□□□□□ -1.71
NEB-219ENST00000604864 HTATSF1O43719 755 aaKnown RBP4.35□□□□□ -1.71
NEB-219ENST00000604864 AAMPQ13685 434 aa4.35□□□□□ -1.71
NEB-219ENST00000604864 NAP1L5Q96NT1 182 aaPredicted RBP4.35□□□□□ -1.71
NEB-219ENST00000604864 DHX8Q14562 1220 aaKnown RBP4.35□□□□□ -1.71
NEB-219ENST00000604864 ABCC9O60706 1549 aa4.35□□□□□ -1.71
NEB-219ENST00000604864 PTMAP06454 111 aaKnown RBP4.35□□□□□ -1.71
NEB-219ENST00000604864 VSIG10Q8N0Z9 540 aa4.35□□□□□ -1.71
NEB-219ENST00000604864 A0A0U1RQG5 324 aaPredicted RBP4.35□□□□□ -1.71
NEB-219ENST00000604864 RWDD1Q9H446 243 aaPredicted RBP4.34□□□□□ -1.71
NEB-219ENST00000604864 CDCA8Q53HL2 280 aa4.34□□□□□ -1.71
NEB-219ENST00000604864 GOLGA6L1Q8N7Z2 621 aa4.34□□□□□ -1.71
NEB-219ENST00000604864 CEP162Q5TB80 1403 aa4.34□□□□□ -1.71
NEB-219ENST00000604864 ANO8Q9HCE9 1232 aaPredicted RBP4.34□□□□□ -1.71
NEB-219ENST00000604864 NGEFQ8N5V2 710 aa4.33□□□□□ -1.72
NEB-219ENST00000604864 RRP9O43818 475 aaKnown RBP4.32□□□□□ -1.72
NEB-219ENST00000604864 PHF14O94880 888 aa4.32□□□□□ -1.72
NEB-219ENST00000604864 TPM1P09493 284 aa4.32□□□□□ -1.72
NEB-219ENST00000604864 RRP12Q5JTH9 1297 aaKnown RBP4.32□□□□□ -1.72
NEB-219ENST00000604864 NOP58Q9Y2X3 529 aaKnown RBP4.32□□□□□ -1.72
NEB-219ENST00000604864 CLGNO14967 610 aa4.32□□□□□ -1.72
NEB-219ENST00000604864 MSNP26038 577 aaKnown RBP4.32□□□□□ -1.72
NEB-219ENST00000604864 TPM2P07951 284 aa4.31□□□□□ -1.72
NEB-219ENST00000604864 GOLGA6L4A6NEF3 574 aa4.31□□□□□ -1.72
NEB-219ENST00000604864 A6NNZ2 444 aa4.31□□□□□ -1.72
NEB-219ENST00000604864 TUBB8Q3ZCM7 444 aa4.31□□□□□ -1.72
NEB-219ENST00000604864 DIAPH3Q9NSV4 1193 aa4.31□□□□□ -1.72
NEB-219ENST00000604864 HNRNPUQ00839 825 aaKnown RBP eCLIP4.31□□□□□ -1.72
NEB-219ENST00000604864 TSR1Q2NL82 804 aaKnown RBP4.31□□□□□ -1.72
NEB-219ENST00000604864 SLC4A1APQ9BWU0 796 aaKnown RBP4.31□□□□□ -1.72
NEB-219ENST00000604864 ITGAEP38570 1179 aa4.3□□□□□ -1.72
NEB-219ENST00000604864 CWC22Q9HCG8 908 aaKnown RBP4.3□□□□□ -1.72
NEB-219ENST00000604864 ERCC4Q92889 916 aaPredicted RBP4.3□□□□□ -1.72
NEB-219ENST00000604864 PDE3BQ13370 1112 aa4.3□□□□□ -1.72
NEB-219ENST00000604864 SYAP1Q96A49 352 aaPredicted RBP4.3□□□□□ -1.72
NEB-219ENST00000604864 FANCIQ9NVI1 1328 aa4.3□□□□□ -1.72
NEB-219ENST00000604864 HMGN5P82970 282 aaKnown RBP4.3□□□□□ -1.72
NEB-219ENST00000604864 GBP4Q96PP9 640 aa4.3□□□□□ -1.72
NEB-219ENST00000604864 DRC7Q8IY82 874 aa4.29□□□□□ -1.72
NEB-219ENST00000604864 POLR3GO15318 223 aaPredicted RBP4.29□□□□□ -1.72
NEB-219ENST00000604864 FAM9BQ8IZU0 186 aa4.29□□□□□ -1.72
NEB-219ENST00000604864 ISY1Q9ULR0 285 aaKnown RBP4.29□□□□□ -1.72
NEB-219ENST00000604864 NPM2Q86SE8 214 aaKnown RBP4.29□□□□□ -1.72
NEB-219ENST00000604864 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.29□□□□□ -1.72
NEB-219ENST00000604864 TUBB4AP04350 444 aa4.29□□□□□ -1.72
NEB-219ENST00000604864 CAVIN1Q6NZI2 390 aaKnown RBP4.29□□□□□ -1.72
NEB-219ENST00000604864 PODNQ7Z5L7 613 aa4.28□□□□□ -1.72
NEB-219ENST00000604864 CSRNP3Q8WYN3 585 aa4.28□□□□□ -1.72
NEB-219ENST00000604864 DEF6Q9H4E7 631 aa4.28□□□□□ -1.72
NEB-219ENST00000604864 MRE11P49959 708 aa4.28□□□□□ -1.72
NEB-219ENST00000604864 NUDCQ9Y266 331 aa4.28□□□□□ -1.73
NEB-219ENST00000604864 TSPYL1Q9H0U9 437 aa4.27□□□□□ -1.73
NEB-219ENST00000604864 CCDC34Q96HJ3 373 aa4.27□□□□□ -1.73
NEB-219ENST00000604864 TPM4P67936 248 aa4.27□□□□□ -1.73
NEB-219ENST00000604864 EIF4G2P78344 907 aaKnown RBP eCLIP4.27□□□□□ -1.73
NEB-219ENST00000604864 ABCC8Q09428 1581 aa4.27□□□□□ -1.73
NEB-219ENST00000604864 RBM28Q9NW13 759 aaKnown RBP4.27□□□□□ -1.73
NEB-219ENST00000604864 UBE2Q2Q8WVN8 375 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms