RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
CDCA3-212ENST00000604599 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
CDCA3-212ENST00000604599 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
CDCA3-212ENST00000604599 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
CDCA3-212ENST00000604599 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDCA3-212ENST00000604599 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
CDCA3-212ENST00000604599 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDCA3-212ENST00000604599 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
CDCA3-212ENST00000604599 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
CDCA3-212ENST00000604599 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
CDCA3-212ENST00000604599 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
CDCA3-212ENST00000604599 NBR1Q14596 966 aa17.27■□□□□ 0.35
CDCA3-212ENST00000604599 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
CDCA3-212ENST00000604599 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
CDCA3-212ENST00000604599 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
CDCA3-212ENST00000604599 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
CDCA3-212ENST00000604599 TIAM1Q13009 1591 aa17.23■□□□□ 0.35
CDCA3-212ENST00000604599 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
CDCA3-212ENST00000604599 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
CDCA3-212ENST00000604599 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
CDCA3-212ENST00000604599 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
CDCA3-212ENST00000604599 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
CDCA3-212ENST00000604599 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
CDCA3-212ENST00000604599 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
CDCA3-212ENST00000604599 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
CDCA3-212ENST00000604599 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
CDCA3-212ENST00000604599 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
CDCA3-212ENST00000604599 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
CDCA3-212ENST00000604599 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
CDCA3-212ENST00000604599 CUX1P39880 1505 aa17.1■□□□□ 0.33
CDCA3-212ENST00000604599 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
CDCA3-212ENST00000604599 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
CDCA3-212ENST00000604599 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
CDCA3-212ENST00000604599 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
CDCA3-212ENST00000604599 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
CDCA3-212ENST00000604599 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
CDCA3-212ENST00000604599 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
CDCA3-212ENST00000604599 HSPA5P11021 654 aaKnown RBP17.01■□□□□ 0.31
CDCA3-212ENST00000604599 CCDC18Q5T9S5 1454 aa17.01■□□□□ 0.31
CDCA3-212ENST00000604599 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
CDCA3-212ENST00000604599 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
CDCA3-212ENST00000604599 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
CDCA3-212ENST00000604599 IL27Q8NEV9 243 aa17■□□□□ 0.31
CDCA3-212ENST00000604599 MRS2Q9HD23 443 aa17■□□□□ 0.31
CDCA3-212ENST00000604599 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
CDCA3-212ENST00000604599 IPO9Q96P70 1041 aaKnown RBP16.98■□□□□ 0.31
CDCA3-212ENST00000604599 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
CDCA3-212ENST00000604599 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
CDCA3-212ENST00000604599 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
CDCA3-212ENST00000604599 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.31
CDCA3-212ENST00000604599 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
CDCA3-212ENST00000604599 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
CDCA3-212ENST00000604599 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
CDCA3-212ENST00000604599 IGF1RP08069 1367 aa16.94■□□□□ 0.3
CDCA3-212ENST00000604599 AKNAQ7Z591 1439 aa16.93■□□□□ 0.3
CDCA3-212ENST00000604599 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
CDCA3-212ENST00000604599 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDCA3-212ENST00000604599 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.38e-7■□□□□ 11.3
CDCA3-212ENST00000604599 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
CDCA3-212ENST00000604599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDCA3-212ENST00000604599 PTPRKQ15262 1439 aa16.9■□□□□ 0.3
CDCA3-212ENST00000604599 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
CDCA3-212ENST00000604599 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
CDCA3-212ENST00000604599 HFM1A2PYH4 1435 aa16.9■□□□□ 0.3
CDCA3-212ENST00000604599 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
CDCA3-212ENST00000604599 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
CDCA3-212ENST00000604599 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
CDCA3-212ENST00000604599 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
CDCA3-212ENST00000604599 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
CDCA3-212ENST00000604599 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
CDCA3-212ENST00000604599 NAIPQ13075 1403 aa16.85■□□□□ 0.29
CDCA3-212ENST00000604599 CCDC7Q96M83 1385 aa16.84■□□□□ 0.29
CDCA3-212ENST00000604599 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.29
CDCA3-212ENST00000604599 FYCO1Q9BQS8 1478 aa16.83■□□□□ 0.28
CDCA3-212ENST00000604599 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
CDCA3-212ENST00000604599 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
CDCA3-212ENST00000604599 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
CDCA3-212ENST00000604599 NEFMP07197 916 aa16.8■□□□□ 0.28
CDCA3-212ENST00000604599 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
CDCA3-212ENST00000604599 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
CDCA3-212ENST00000604599 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
CDCA3-212ENST00000604599 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
CDCA3-212ENST00000604599 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
CDCA3-212ENST00000604599 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
CDCA3-212ENST00000604599 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.27
CDCA3-212ENST00000604599 CFTRP13569 1480 aa16.76■□□□□ 0.27
CDCA3-212ENST00000604599 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
CDCA3-212ENST00000604599 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
CDCA3-212ENST00000604599 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
CDCA3-212ENST00000604599 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-212ENST00000604599 FOXD1Q16676 465 aa16.73■□□□□ 0.27
CDCA3-212ENST00000604599 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
CDCA3-212ENST00000604599 NBPF8Q3BBV2 869 aa16.69■□□□□ 0.26
CDCA3-212ENST00000604599 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
CDCA3-212ENST00000604599 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
CDCA3-212ENST00000604599 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
CDCA3-212ENST00000604599 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
CDCA3-212ENST00000604599 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
CDCA3-212ENST00000604599 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
CDCA3-212ENST00000604599 WASHC2CQ9Y4E1 1318 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms