RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 KIF13AQ9H1H9 1805 aa21.31■■□□□ 1
PDLIM1P1-201ENST00000604187 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
PDLIM1P1-201ENST00000604187 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
PDLIM1P1-201ENST00000604187 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
PDLIM1P1-201ENST00000604187 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
PDLIM1P1-201ENST00000604187 KDM4FA0A1W2PPD8 638 aa21.22■□□□□ 0.99
PDLIM1P1-201ENST00000604187 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
PDLIM1P1-201ENST00000604187 DIP2BQ9P265 1576 aa21.21■□□□□ 0.99
PDLIM1P1-201ENST00000604187 ADCY10Q96PN6 1610 aa21.17■□□□□ 0.98
PDLIM1P1-201ENST00000604187 KDM6BO15054 1643 aa21.15■□□□□ 0.98
PDLIM1P1-201ENST00000604187 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
PDLIM1P1-201ENST00000604187 ILDR1Q86SU0 546 aaPredicted RBP21.07■□□□□ 0.96
PDLIM1P1-201ENST00000604187 IGF1RP08069 1367 aa21.02■□□□□ 0.96
PDLIM1P1-201ENST00000604187 PTPRGP23470 1445 aa21.02■□□□□ 0.96
PDLIM1P1-201ENST00000604187 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
PDLIM1P1-201ENST00000604187 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
PDLIM1P1-201ENST00000604187 ABCC2Q92887 1545 aa20.95■□□□□ 0.94
PDLIM1P1-201ENST00000604187 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
PDLIM1P1-201ENST00000604187 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
PDLIM1P1-201ENST00000604187 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
PDLIM1P1-201ENST00000604187 ADGRL1O94910 1474 aa20.93■□□□□ 0.94
PDLIM1P1-201ENST00000604187 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
PDLIM1P1-201ENST00000604187 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
PDLIM1P1-201ENST00000604187 CUL7Q14999 1698 aa20.9■□□□□ 0.94
PDLIM1P1-201ENST00000604187 GLI2P10070 1586 aa20.87■□□□□ 0.93
PDLIM1P1-201ENST00000604187 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
PDLIM1P1-201ENST00000604187 UHRF1BP1LA0JNW5 1464 aa20.84■□□□□ 0.93
PDLIM1P1-201ENST00000604187 COL17A1Q9UMD9 1497 aaPredicted RBP20.84■□□□□ 0.93
PDLIM1P1-201ENST00000604187 UACAQ9BZF9 1416 aa20.83■□□□□ 0.93
PDLIM1P1-201ENST00000604187 PPRC1Q5VV67 1664 aaKnown RBP20.83■□□□□ 0.92
PDLIM1P1-201ENST00000604187 EPRSP07814 1512 aaKnown RBP20.8■□□□□ 0.92
PDLIM1P1-201ENST00000604187 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1P1-201ENST00000604187 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
PDLIM1P1-201ENST00000604187 DISP1Q96F81 1524 aa20.77■□□□□ 0.92
PDLIM1P1-201ENST00000604187 HECW2Q9P2P5 1572 aa20.76■□□□□ 0.91
PDLIM1P1-201ENST00000604187 TEX14Q8IWB6 1497 aa20.76■□□□□ 0.91
PDLIM1P1-201ENST00000604187 KDM5BQ9UGL1 1544 aa20.74■□□□□ 0.91
PDLIM1P1-201ENST00000604187 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
PDLIM1P1-201ENST00000604187 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
PDLIM1P1-201ENST00000604187 UGGT2Q9NYU1 1516 aa20.65■□□□□ 0.9
PDLIM1P1-201ENST00000604187 WDR7Q9Y4E6 1490 aa20.65■□□□□ 0.9
PDLIM1P1-201ENST00000604187 ZCCHC11Q5TAX3 1644 aaKnown RBP20.64■□□□□ 0.9
PDLIM1P1-201ENST00000604187 KIAA0556O60303 1618 aa20.61■□□□□ 0.89
PDLIM1P1-201ENST00000604187 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
PDLIM1P1-201ENST00000604187 CD109Q6YHK3 1445 aa20.58■□□□□ 0.88
PDLIM1P1-201ENST00000604187 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
PDLIM1P1-201ENST00000604187 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
PDLIM1P1-201ENST00000604187 FBXO41Q8TF61 875 aa20.49■□□□□ 0.87
PDLIM1P1-201ENST00000604187 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
PDLIM1P1-201ENST00000604187 ABCA8O94911 1581 aa20.45■□□□□ 0.86
PDLIM1P1-201ENST00000604187 CFAP43Q8NDM7 1665 aa20.45■□□□□ 0.86
PDLIM1P1-201ENST00000604187 KIF21BO75037 1637 aa20.43■□□□□ 0.86
PDLIM1P1-201ENST00000604187 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
PDLIM1P1-201ENST00000604187 ARAP3Q8WWN8 1544 aa20.4■□□□□ 0.86
PDLIM1P1-201ENST00000604187 PTPRMP28827 1452 aa20.38■□□□□ 0.85
PDLIM1P1-201ENST00000604187 RAPGEF3O95398 923 aa20.32■□□□□ 0.84
PDLIM1P1-201ENST00000604187 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
PDLIM1P1-201ENST00000604187 ATP10BO94823 1461 aa20.3■□□□□ 0.84
PDLIM1P1-201ENST00000604187 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
PDLIM1P1-201ENST00000604187 ARID4BQ4LE39 1312 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1P1-201ENST00000604187 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
PDLIM1P1-201ENST00000604187 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1P1-201ENST00000604187 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
PDLIM1P1-201ENST00000604187 ADAMTSL3P82987 1691 aa20.28■□□□□ 0.84
PDLIM1P1-201ENST00000604187 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
PDLIM1P1-201ENST00000604187 NEO1Q92859 1461 aa20.25■□□□□ 0.83
PDLIM1P1-201ENST00000604187 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
PDLIM1P1-201ENST00000604187 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
PDLIM1P1-201ENST00000604187 MADDQ8WXG6 1647 aa20.21■□□□□ 0.83
PDLIM1P1-201ENST00000604187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
PDLIM1P1-201ENST00000604187 HNRNPUL2Q1KMD3 747 aaKnown RBP20.2■□□□□ 0.82
PDLIM1P1-201ENST00000604187 FRMPD1Q5SYB0 1578 aa20.2■□□□□ 0.82
PDLIM1P1-201ENST00000604187 BCORL1Q5H9F3 1711 aa20.18■□□□□ 0.82
PDLIM1P1-201ENST00000604187 HSPA2P54652 639 aa20.17■□□□□ 0.82
PDLIM1P1-201ENST00000604187 ARHGEF40Q8TER5 1519 aa20.14■□□□□ 0.81
PDLIM1P1-201ENST00000604187 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
PDLIM1P1-201ENST00000604187 DENND4BO75064 1496 aaPredicted RBP20.12■□□□□ 0.81
PDLIM1P1-201ENST00000604187 NUP153P49790 1475 aaKnown RBP20.11■□□□□ 0.81
PDLIM1P1-201ENST00000604187 RAPGEF6Q8TEU7 1601 aa20.1■□□□□ 0.81
PDLIM1P1-201ENST00000604187 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
PDLIM1P1-201ENST00000604187 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
PDLIM1P1-201ENST00000604187 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.81
PDLIM1P1-201ENST00000604187 POGZQ7Z3K3 1410 aa20.08■□□□□ 0.8
PDLIM1P1-201ENST00000604187 AKNAQ7Z591 1439 aa20.08■□□□□ 0.8
PDLIM1P1-201ENST00000604187 CERKQ8TCT0 537 aa20.07■□□□□ 0.8
PDLIM1P1-201ENST00000604187 FANCAO15360 1455 aa20.06■□□□□ 0.8
PDLIM1P1-201ENST00000604187 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
PDLIM1P1-201ENST00000604187 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
PDLIM1P1-201ENST00000604187 YEATS2Q9ULM3 1422 aa20.04■□□□□ 0.8
PDLIM1P1-201ENST00000604187 MLECQ14165 292 aa20.02■□□□□ 0.8
PDLIM1P1-201ENST00000604187 ZFYVE16Q7Z3T8 1539 aa20.02■□□□□ 0.79
PDLIM1P1-201ENST00000604187 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
PDLIM1P1-201ENST00000604187 ZMYM4Q5VZL5 1548 aa20.01■□□□□ 0.79
PDLIM1P1-201ENST00000604187 RICTORQ6R327 1708 aa19.99■□□□□ 0.79
PDLIM1P1-201ENST00000604187 EFCAB5A4FU69 1503 aa19.98■□□□□ 0.79
PDLIM1P1-201ENST00000604187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.98■□□□□ 0.79
PDLIM1P1-201ENST00000604187 MAGI2Q86UL8 1455 aa19.97■□□□□ 0.79
PDLIM1P1-201ENST00000604187 CFAP74Q9C0B2 1584 aa19.96■□□□□ 0.79
PDLIM1P1-201ENST00000604187 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
PDLIM1P1-201ENST00000604187 SIGLEC1Q9BZZ2 1709 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms