RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 IPO9Q96P70 1041 aaKnown RBP4.42□□□□□ -1.7
NEB-218ENST00000603639 BAZ1AQ9NRL2 1556 aaPredicted RBP4.42□□□□□ -1.7
NEB-218ENST00000603639 SMARCA2P51531 1590 aa4.42□□□□□ -1.7
NEB-218ENST00000603639 GSE1Q14687 1217 aa4.42□□□□□ -1.7
NEB-218ENST00000603639 TCERG1O14776 1098 aaKnown RBP4.42□□□□□ -1.7
NEB-218ENST00000603639 HAP1P54257 671 aaPredicted RBP4.42□□□□□ -1.7
NEB-218ENST00000603639 DEKP35659 375 aaKnown RBP4.42□□□□□ -1.7
NEB-218ENST00000603639 MYH16Q9H6N6 1097 aa4.41□□□□□ -1.7
NEB-218ENST00000603639 CHIC1Q5VXU3 224 aa4.41□□□□□ -1.7
NEB-218ENST00000603639 SUPT16HQ9Y5B9 1047 aaKnown RBP4.41□□□□□ -1.7
NEB-218ENST00000603639 DDX10Q13206 875 aaKnown RBP4.41□□□□□ -1.7
NEB-218ENST00000603639 DNTTIP2Q5QJE6 756 aaKnown RBP4.4□□□□□ -1.7
NEB-218ENST00000603639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.4□□□□□ -1.71
NEB-218ENST00000603639 IL27Q8NEV9 243 aa4.4□□□□□ -1.71
NEB-218ENST00000603639 CHAF1AQ13111 956 aaPredicted RBP4.4□□□□□ -1.71
NEB-218ENST00000603639 PDIA4P13667 645 aaKnown RBP4.39□□□□□ -1.71
NEB-218ENST00000603639 HNRNPUL2Q1KMD3 747 aaKnown RBP4.39□□□□□ -1.71
NEB-218ENST00000603639 PDCL2Q8N4E4 241 aa4.39□□□□□ -1.71
NEB-218ENST00000603639 HDAC5Q9UQL6 1122 aa4.38□□□□□ -1.71
NEB-218ENST00000603639 BCL11AQ9H165 835 aa4.38□□□□□ -1.71
NEB-218ENST00000603639 TUBB4BP68371 445 aa4.38□□□□□ -1.71
NEB-218ENST00000603639 CALD1Q05682 793 aaKnown RBP4.38□□□□□ -1.71
NEB-218ENST00000603639 GPS2Q13227 327 aa4.38□□□□□ -1.71
NEB-218ENST00000603639 TEX35Q5T0J7 233 aa4.38□□□□□ -1.71
NEB-218ENST00000603639 GOLGA6L6A8MZA4 724 aa4.38□□□□□ -1.71
NEB-218ENST00000603639 NOM1Q5C9Z4 860 aaKnown RBP4.38□□□□□ -1.71
NEB-218ENST00000603639 HMGB1P09429 215 aaKnown RBP4.37□□□□□ -1.71
NEB-218ENST00000603639 IPO8O15397 1037 aaKnown RBP4.37□□□□□ -1.71
NEB-218ENST00000603639 PDCL3Q9H2J4 239 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 FAM50AQ14320 339 aaKnown RBP4.37□□□□□ -1.71
NEB-218ENST00000603639 TRIM52Q96A61 297 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
NEB-218ENST00000603639 CASC1Q6TDU7 716 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 STK11IPQ8N1F8 1099 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 FAM43AQ8N2R8 423 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 CCER2I3L3R5 266 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 NBR1Q14596 966 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 SETQ01105 290 aaPredicted RBP4.37□□□□□ -1.71
NEB-218ENST00000603639 KIAA2012Q0VF49 1180 aa4.37□□□□□ -1.71
NEB-218ENST00000603639 LETM1O95202 739 aaPredicted RBP4.37□□□□□ -1.71
NEB-218ENST00000603639 TPM3P06753 285 aa4.36□□□□□ -1.71
NEB-218ENST00000603639 GOLGA3Q08378 1498 aa4.36□□□□□ -1.71
NEB-218ENST00000603639 RTN4Q9NQC3 1192 aaKnown RBP4.36□□□□□ -1.71
NEB-218ENST00000603639 HTATSF1O43719 755 aaKnown RBP4.35□□□□□ -1.71
NEB-218ENST00000603639 AAMPQ13685 434 aa4.35□□□□□ -1.71
NEB-218ENST00000603639 NAP1L5Q96NT1 182 aaPredicted RBP4.35□□□□□ -1.71
NEB-218ENST00000603639 DHX8Q14562 1220 aaKnown RBP4.35□□□□□ -1.71
NEB-218ENST00000603639 ABCC9O60706 1549 aa4.35□□□□□ -1.71
NEB-218ENST00000603639 PTMAP06454 111 aaKnown RBP4.35□□□□□ -1.71
NEB-218ENST00000603639 VSIG10Q8N0Z9 540 aa4.35□□□□□ -1.71
NEB-218ENST00000603639 A0A0U1RQG5 324 aaPredicted RBP4.35□□□□□ -1.71
NEB-218ENST00000603639 RWDD1Q9H446 243 aaPredicted RBP4.34□□□□□ -1.71
NEB-218ENST00000603639 CDCA8Q53HL2 280 aa4.34□□□□□ -1.71
NEB-218ENST00000603639 GOLGA6L1Q8N7Z2 621 aa4.34□□□□□ -1.71
NEB-218ENST00000603639 CEP162Q5TB80 1403 aa4.34□□□□□ -1.71
NEB-218ENST00000603639 ANO8Q9HCE9 1232 aaPredicted RBP4.34□□□□□ -1.71
NEB-218ENST00000603639 NGEFQ8N5V2 710 aa4.33□□□□□ -1.72
NEB-218ENST00000603639 RRP9O43818 475 aaKnown RBP4.32□□□□□ -1.72
NEB-218ENST00000603639 PHF14O94880 888 aa4.32□□□□□ -1.72
NEB-218ENST00000603639 TPM1P09493 284 aa4.32□□□□□ -1.72
NEB-218ENST00000603639 RRP12Q5JTH9 1297 aaKnown RBP4.32□□□□□ -1.72
NEB-218ENST00000603639 NOP58Q9Y2X3 529 aaKnown RBP4.32□□□□□ -1.72
NEB-218ENST00000603639 CLGNO14967 610 aa4.32□□□□□ -1.72
NEB-218ENST00000603639 MSNP26038 577 aaKnown RBP4.32□□□□□ -1.72
NEB-218ENST00000603639 TPM2P07951 284 aa4.31□□□□□ -1.72
NEB-218ENST00000603639 GOLGA6L4A6NEF3 574 aa4.31□□□□□ -1.72
NEB-218ENST00000603639 A6NNZ2 444 aa4.31□□□□□ -1.72
NEB-218ENST00000603639 TUBB8Q3ZCM7 444 aa4.31□□□□□ -1.72
NEB-218ENST00000603639 DIAPH3Q9NSV4 1193 aa4.31□□□□□ -1.72
NEB-218ENST00000603639 HNRNPUQ00839 825 aaKnown RBP eCLIP4.31□□□□□ -1.72
NEB-218ENST00000603639 TSR1Q2NL82 804 aaKnown RBP4.31□□□□□ -1.72
NEB-218ENST00000603639 SLC4A1APQ9BWU0 796 aaKnown RBP4.31□□□□□ -1.72
NEB-218ENST00000603639 ITGAEP38570 1179 aa4.3□□□□□ -1.72
NEB-218ENST00000603639 CWC22Q9HCG8 908 aaKnown RBP4.3□□□□□ -1.72
NEB-218ENST00000603639 ERCC4Q92889 916 aaPredicted RBP4.3□□□□□ -1.72
NEB-218ENST00000603639 PDE3BQ13370 1112 aa4.3□□□□□ -1.72
NEB-218ENST00000603639 SYAP1Q96A49 352 aaPredicted RBP4.3□□□□□ -1.72
NEB-218ENST00000603639 FANCIQ9NVI1 1328 aa4.3□□□□□ -1.72
NEB-218ENST00000603639 HMGN5P82970 282 aaKnown RBP4.3□□□□□ -1.72
NEB-218ENST00000603639 GBP4Q96PP9 640 aa4.3□□□□□ -1.72
NEB-218ENST00000603639 DRC7Q8IY82 874 aa4.29□□□□□ -1.72
NEB-218ENST00000603639 POLR3GO15318 223 aaPredicted RBP4.29□□□□□ -1.72
NEB-218ENST00000603639 FAM9BQ8IZU0 186 aa4.29□□□□□ -1.72
NEB-218ENST00000603639 ISY1Q9ULR0 285 aaKnown RBP4.29□□□□□ -1.72
NEB-218ENST00000603639 NPM2Q86SE8 214 aaKnown RBP4.29□□□□□ -1.72
NEB-218ENST00000603639 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.29□□□□□ -1.72
NEB-218ENST00000603639 TUBB4AP04350 444 aa4.29□□□□□ -1.72
NEB-218ENST00000603639 CAVIN1Q6NZI2 390 aaKnown RBP4.29□□□□□ -1.72
NEB-218ENST00000603639 PODNQ7Z5L7 613 aa4.28□□□□□ -1.72
NEB-218ENST00000603639 CSRNP3Q8WYN3 585 aa4.28□□□□□ -1.72
NEB-218ENST00000603639 DEF6Q9H4E7 631 aa4.28□□□□□ -1.72
NEB-218ENST00000603639 MRE11P49959 708 aa4.28□□□□□ -1.72
NEB-218ENST00000603639 NUDCQ9Y266 331 aa4.28□□□□□ -1.73
NEB-218ENST00000603639 TSPYL1Q9H0U9 437 aa4.27□□□□□ -1.73
NEB-218ENST00000603639 CCDC34Q96HJ3 373 aa4.27□□□□□ -1.73
NEB-218ENST00000603639 TPM4P67936 248 aa4.27□□□□□ -1.73
NEB-218ENST00000603639 EIF4G2P78344 907 aaKnown RBP eCLIP4.27□□□□□ -1.73
NEB-218ENST00000603639 ABCC8Q09428 1581 aa4.27□□□□□ -1.73
NEB-218ENST00000603639 RBM28Q9NW13 759 aaKnown RBP4.27□□□□□ -1.73
NEB-218ENST00000603639 UBE2Q2Q8WVN8 375 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms