RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ABCC10Q5T3U5 1492 aa18.04■□□□□ 0.48
HIF3A-219ENST00000600879 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
HIF3A-219ENST00000600879 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
HIF3A-219ENST00000600879 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
HIF3A-219ENST00000600879 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
HIF3A-219ENST00000600879 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
HIF3A-219ENST00000600879 KDM6BO15054 1643 aa17.97■□□□□ 0.47
HIF3A-219ENST00000600879 ADCY10Q96PN6 1610 aa17.97■□□□□ 0.47
HIF3A-219ENST00000600879 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
HIF3A-219ENST00000600879 MAPKBP1O60336 1514 aa17.94■□□□□ 0.46
HIF3A-219ENST00000600879 TTBK1Q5TCY1 1321 aaPredicted RBP17.94■□□□□ 0.46
HIF3A-219ENST00000600879 TSPOAP1O95153 1857 aa17.93■□□□□ 0.46
HIF3A-219ENST00000600879 ADGRL1O94910 1474 aa17.8■□□□□ 0.44
HIF3A-219ENST00000600879 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.44
HIF3A-219ENST00000600879 PTPRGP23470 1445 aa17.76■□□□□ 0.43
HIF3A-219ENST00000600879 IGF1RP08069 1367 aa17.73■□□□□ 0.43
HIF3A-219ENST00000600879 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
HIF3A-219ENST00000600879 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
HIF3A-219ENST00000600879 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
HIF3A-219ENST00000600879 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
HIF3A-219ENST00000600879 ABCC2Q92887 1545 aa17.69■□□□□ 0.42
HIF3A-219ENST00000600879 TNIKQ9UKE5 1360 aa17.66■□□□□ 0.42
HIF3A-219ENST00000600879 CUL7Q14999 1698 aa17.64■□□□□ 0.42
HIF3A-219ENST00000600879 KIF27Q86VH2 1401 aa17.64■□□□□ 0.42
HIF3A-219ENST00000600879 PLB1Q6P1J6 1458 aa17.64■□□□□ 0.41
HIF3A-219ENST00000600879 GLI2P10070 1586 aa17.63■□□□□ 0.41
HIF3A-219ENST00000600879 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
HIF3A-219ENST00000600879 EPRSP07814 1512 aaKnown RBP17.59■□□□□ 0.41
HIF3A-219ENST00000600879 CARMIL1Q5VZK9 1371 aa17.59■□□□□ 0.41
HIF3A-219ENST00000600879 UACAQ9BZF9 1416 aa17.58■□□□□ 0.41
HIF3A-219ENST00000600879 MAP3K4Q9Y6R4 1608 aa17.56■□□□□ 0.4
HIF3A-219ENST00000600879 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
HIF3A-219ENST00000600879 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
HIF3A-219ENST00000600879 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
HIF3A-219ENST00000600879 TEX14Q8IWB6 1497 aa17.51■□□□□ 0.39
HIF3A-219ENST00000600879 ZCCHC11Q5TAX3 1644 aaKnown RBP17.51■□□□□ 0.39
HIF3A-219ENST00000600879 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
HIF3A-219ENST00000600879 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
HIF3A-219ENST00000600879 WDR7Q9Y4E6 1490 aa17.44■□□□□ 0.38
HIF3A-219ENST00000600879 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
HIF3A-219ENST00000600879 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
HIF3A-219ENST00000600879 KIF21BO75037 1637 aa17.41■□□□□ 0.38
HIF3A-219ENST00000600879 CD109Q6YHK3 1445 aa17.4■□□□□ 0.38
HIF3A-219ENST00000600879 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
HIF3A-219ENST00000600879 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
HIF3A-219ENST00000600879 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
HIF3A-219ENST00000600879 MAGI3Q5TCQ9 1506 aa17.35■□□□□ 0.37
HIF3A-219ENST00000600879 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
HIF3A-219ENST00000600879 PTPRMP28827 1452 aa17.29■□□□□ 0.36
HIF3A-219ENST00000600879 ABCA8O94911 1581 aa17.28■□□□□ 0.36
HIF3A-219ENST00000600879 RAPGEF3O95398 923 aa17.27■□□□□ 0.36
HIF3A-219ENST00000600879 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
HIF3A-219ENST00000600879 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
HIF3A-219ENST00000600879 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
HIF3A-219ENST00000600879 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
HIF3A-219ENST00000600879 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-219ENST00000600879 ARAP3Q8WWN8 1544 aa17.22■□□□□ 0.35
HIF3A-219ENST00000600879 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
HIF3A-219ENST00000600879 HSPA2P54652 639 aa17.2■□□□□ 0.34
HIF3A-219ENST00000600879 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
HIF3A-219ENST00000600879 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
HIF3A-219ENST00000600879 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
HIF3A-219ENST00000600879 ATP10BO94823 1461 aa17.18■□□□□ 0.34
HIF3A-219ENST00000600879 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
HIF3A-219ENST00000600879 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
HIF3A-219ENST00000600879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-219ENST00000600879 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
HIF3A-219ENST00000600879 ABCA9Q8IUA7 1624 aa17.11■□□□□ 0.33
HIF3A-219ENST00000600879 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
HIF3A-219ENST00000600879 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
HIF3A-219ENST00000600879 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-219ENST00000600879 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
HIF3A-219ENST00000600879 NEO1Q92859 1461 aa17.06■□□□□ 0.32
HIF3A-219ENST00000600879 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
HIF3A-219ENST00000600879 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-219ENST00000600879 CERKQ8TCT0 537 aa17.06■□□□□ 0.32
HIF3A-219ENST00000600879 MLECQ14165 292 aa17.05■□□□□ 0.32
HIF3A-219ENST00000600879 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
HIF3A-219ENST00000600879 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
HIF3A-219ENST00000600879 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
HIF3A-219ENST00000600879 RAPGEF6Q8TEU7 1601 aa17■□□□□ 0.31
HIF3A-219ENST00000600879 YEATS2Q9ULM3 1422 aa17■□□□□ 0.31
HIF3A-219ENST00000600879 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-219ENST00000600879 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
HIF3A-219ENST00000600879 AKNAQ7Z591 1439 aa16.97■□□□□ 0.31
HIF3A-219ENST00000600879 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
HIF3A-219ENST00000600879 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
HIF3A-219ENST00000600879 FANCAO15360 1455 aa16.95■□□□□ 0.3
HIF3A-219ENST00000600879 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-219ENST00000600879 FHOD3Q2V2M9 1422 aa16.94■□□□□ 0.3
HIF3A-219ENST00000600879 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
HIF3A-219ENST00000600879 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
HIF3A-219ENST00000600879 PLEKHD1A6NEE1 506 aa16.91■□□□□ 0.3
HIF3A-219ENST00000600879 SOCS7O14512 581 aa16.91■□□□□ 0.3
HIF3A-219ENST00000600879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
HIF3A-219ENST00000600879 TTC37Q6PGP7 1564 aa16.9■□□□□ 0.3
HIF3A-219ENST00000600879 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
HIF3A-219ENST00000600879 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
HIF3A-219ENST00000600879 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
HIF3A-219ENST00000600879 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms