RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 KIF27Q86VH2 1401 aa30.21■■■□□ 2.43
SMG9-210ENST00000600097 IGF1RP08069 1367 aa30.19■■■□□ 2.42
SMG9-210ENST00000600097 NPM1P06748 294 aaKnown RBP eCLIP30.17■■■□□ 2.42
SMG9-210ENST00000600097 KIAA0586Q9BVV6 1533 aa30.17■■■□□ 2.42
SMG9-210ENST00000600097 KIF13AQ9H1H9 1805 aa30.12■■■□□ 2.41
SMG9-210ENST00000600097 CUL7Q14999 1698 aa30.11■■■□□ 2.41
SMG9-210ENST00000600097 MAPKBP1O60336 1514 aa30.07■■■□□ 2.4
SMG9-210ENST00000600097 ABCC10Q5T3U5 1492 aa30.07■■■□□ 2.4
SMG9-210ENST00000600097 FAM69CQ0P6D2 419 aa30.07■■■□□ 2.4
SMG9-210ENST00000600097 ADCY10Q96PN6 1610 aa30.02■■■□□ 2.4
SMG9-210ENST00000600097 CARMIL1Q5VZK9 1371 aa30■■■□□ 2.39
SMG9-210ENST00000600097 DIP2BQ9P265 1576 aa29.94■■■□□ 2.38
SMG9-210ENST00000600097 PTPRGP23470 1445 aa29.93■■■□□ 2.38
SMG9-210ENST00000600097 CARMIL2Q6F5E8 1435 aa29.89■■■□□ 2.38
SMG9-210ENST00000600097 TNIKQ9UKE5 1360 aa29.86■■■□□ 2.37
SMG9-210ENST00000600097 IQGAP2Q13576 1575 aa29.81■■■□□ 2.36
SMG9-210ENST00000600097 TTBK1Q5TCY1 1321 aaPredicted RBP29.8■■■□□ 2.36
SMG9-210ENST00000600097 ABCC2Q92887 1545 aa29.77■■■□□ 2.36
SMG9-210ENST00000600097 KDM6BO15054 1643 aa29.74■■■□□ 2.35
SMG9-210ENST00000600097 UHRF1BP1LA0JNW5 1464 aa29.71■■■□□ 2.35
SMG9-210ENST00000600097 PLB1Q6P1J6 1458 aa29.7■■■□□ 2.35
SMG9-210ENST00000600097 RAPGEF2Q9Y4G8 1499 aa29.7■■■□□ 2.35
SMG9-210ENST00000600097 DISP1Q96F81 1524 aa29.68■■■□□ 2.34
SMG9-210ENST00000600097 ASXL2Q76L83 1435 aa29.68■■■□□ 2.34
SMG9-210ENST00000600097 UACAQ9BZF9 1416 aa29.68■■■□□ 2.34
SMG9-210ENST00000600097 TSPOAP1O95153 1857 aa29.67■■■□□ 2.34
SMG9-210ENST00000600097 UGGT2Q9NYU1 1516 aa29.63■■■□□ 2.33
SMG9-210ENST00000600097 GLI2P10070 1586 aa29.61■■■□□ 2.33
SMG9-210ENST00000600097 KDM5BQ9UGL1 1544 aa29.56■■■□□ 2.32
SMG9-210ENST00000600097 KDM4FA0A1W2PPD8 638 aa29.54■■■□□ 2.32
SMG9-210ENST00000600097 KIAA0556O60303 1618 aa29.53■■■□□ 2.32
SMG9-210ENST00000600097 EPRSP07814 1512 aaKnown RBP29.49■■■□□ 2.31
SMG9-210ENST00000600097 PPRC1Q5VV67 1664 aaKnown RBP29.48■■■□□ 2.31
SMG9-210ENST00000600097 ZCCHC11Q5TAX3 1644 aaKnown RBP29.43■■■□□ 2.3
SMG9-210ENST00000600097 GOLGA3Q08378 1498 aa29.42■■■□□ 2.3
SMG9-210ENST00000600097 TEX14Q8IWB6 1497 aa29.42■■■□□ 2.3
SMG9-210ENST00000600097 MAP3K4Q9Y6R4 1608 aa29.41■■■□□ 2.3
SMG9-210ENST00000600097 CTTNBP2Q8WZ74 1663 aa29.37■■■□□ 2.29
SMG9-210ENST00000600097 WDR7Q9Y4E6 1490 aa29.37■■■□□ 2.29
SMG9-210ENST00000600097 COL17A1Q9UMD9 1497 aaPredicted RBP29.36■■■□□ 2.29
SMG9-210ENST00000600097 PRXQ9BXM0 1461 aa29.34■■■□□ 2.29
SMG9-210ENST00000600097 ABCA8O94911 1581 aa29.27■■■□□ 2.28
SMG9-210ENST00000600097 ADGRL1O94910 1474 aa29.26■■■□□ 2.27
SMG9-210ENST00000600097 FAM9AQ8IZU1 332 aaPredicted RBP29.24■■■□□ 2.27
SMG9-210ENST00000600097 CD109Q6YHK3 1445 aa29.22■■■□□ 2.27
SMG9-210ENST00000600097 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
SMG9-210ENST00000600097 MAGI3Q5TCQ9 1506 aa29.2■■■□□ 2.27
SMG9-210ENST00000600097 CFAP43Q8NDM7 1665 aa29.16■■■□□ 2.26
SMG9-210ENST00000600097 CSRNP3Q8WYN3 585 aa29.1■■■□□ 2.25
SMG9-210ENST00000600097 P3H3Q8IVL6 736 aa29.09■■■□□ 2.25
SMG9-210ENST00000600097 ATP10BO94823 1461 aa29.05■■■□□ 2.24
SMG9-210ENST00000600097 ARID3CA6NKF2 412 aa29.03■■■□□ 2.24
SMG9-210ENST00000600097 SAMD9Q5K651 1589 aa28.99■■■□□ 2.23
SMG9-210ENST00000600097 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
SMG9-210ENST00000600097 PHLDB1Q86UU1 1377 aa28.97■■■□□ 2.23
SMG9-210ENST00000600097 EEA1Q15075 1411 aa28.96■■■□□ 2.23
SMG9-210ENST00000600097 ABCA9Q8IUA7 1624 aa28.92■■■□□ 2.22
SMG9-210ENST00000600097 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
SMG9-210ENST00000600097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.9■■■□□ 2.22
SMG9-210ENST00000600097 HNRNPUL2Q1KMD3 747 aaKnown RBP28.9■■■□□ 2.22
SMG9-210ENST00000600097 HECW2Q9P2P5 1572 aa28.88■■■□□ 2.21
SMG9-210ENST00000600097 NEO1Q92859 1461 aa28.85■■■□□ 2.21
SMG9-210ENST00000600097 NUP153P49790 1475 aaKnown RBP28.84■■■□□ 2.21
SMG9-210ENST00000600097 KIF21BO75037 1637 aa28.83■■■□□ 2.21
SMG9-210ENST00000600097 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
SMG9-210ENST00000600097 ILDR1Q86SU0 546 aaPredicted RBP28.82■■■□□ 2.2
SMG9-210ENST00000600097 FHOD3Q2V2M9 1422 aa28.8■■■□□ 2.2
SMG9-210ENST00000600097 RAPGEF3O95398 923 aa28.79■■■□□ 2.2
SMG9-210ENST00000600097 PLEKHD1A6NEE1 506 aa28.77■■■□□ 2.2
SMG9-210ENST00000600097 EFCAB5A4FU69 1503 aa28.7■■■□□ 2.19
SMG9-210ENST00000600097 FRMPD1Q5SYB0 1578 aa28.66■■■□□ 2.18
SMG9-210ENST00000600097 ADAMTSL3P82987 1691 aa28.65■■■□□ 2.18
SMG9-210ENST00000600097 PTPRMP28827 1452 aa28.65■■■□□ 2.18
SMG9-210ENST00000600097 DENND4BO75064 1496 aaPredicted RBP28.64■■■□□ 2.17
SMG9-210ENST00000600097 ARID4BQ4LE39 1312 aaPredicted RBP28.64■■■□□ 2.17
SMG9-210ENST00000600097 AKNAQ7Z591 1439 aa28.62■■■□□ 2.17
SMG9-210ENST00000600097 FANCAO15360 1455 aa28.61■■■□□ 2.17
SMG9-210ENST00000600097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.59■■■□□ 2.17
SMG9-210ENST00000600097 CFAP74Q9C0B2 1584 aa28.58■■■□□ 2.17
SMG9-210ENST00000600097 BCORL1Q5H9F3 1711 aa28.56■■■□□ 2.16
SMG9-210ENST00000600097 ARHGEF40Q8TER5 1519 aa28.55■■■□□ 2.16
SMG9-210ENST00000600097 RICTORQ6R327 1708 aa28.52■■■□□ 2.16
SMG9-210ENST00000600097 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
SMG9-210ENST00000600097 TTC37Q6PGP7 1564 aa28.52■■■□□ 2.16
SMG9-210ENST00000600097 CDK13Q14004 1512 aaKnown RBP28.51■■■□□ 2.15
SMG9-210ENST00000600097 MADDQ8WXG6 1647 aa28.5■■■□□ 2.15
SMG9-210ENST00000600097 FMN1Q68DA7 1419 aa28.49■■■□□ 2.15
SMG9-210ENST00000600097 ZMYM4Q5VZL5 1548 aa28.48■■■□□ 2.15
SMG9-210ENST00000600097 POGZQ7Z3K3 1410 aa28.47■■■□□ 2.15
SMG9-210ENST00000600097 MAGI2Q86UL8 1455 aa28.46■■■□□ 2.15
SMG9-210ENST00000600097 PLCH2O75038 1416 aa28.46■■■□□ 2.15
SMG9-210ENST00000600097 ATP1B4Q9UN42 357 aaPredicted RBP28.44■■■□□ 2.14
SMG9-210ENST00000600097 CDK11AQ9UQ88 783 aaPredicted RBP28.44■■■□□ 2.14
SMG9-210ENST00000600097 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
SMG9-210ENST00000600097 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
SMG9-210ENST00000600097 SCAPERQ9BY12 1400 aa28.42■■■□□ 2.14
SMG9-210ENST00000600097 PCF11O94913 1555 aaKnown RBP28.41■■■□□ 2.14
SMG9-210ENST00000600097 HECW1Q76N89 1606 aa28.41■■■□□ 2.14
SMG9-210ENST00000600097 YEATS2Q9ULM3 1422 aa28.41■■■□□ 2.14
SMG9-210ENST00000600097 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms