RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
HOMER3-211ENST00000599808 ABCC10Q5T3U5 1492 aa22.08■■□□□ 1.12
HOMER3-211ENST00000599808 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
HOMER3-211ENST00000599808 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
HOMER3-211ENST00000599808 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
HOMER3-211ENST00000599808 DIP2BQ9P265 1576 aa22.04■■□□□ 1.12
HOMER3-211ENST00000599808 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.12
HOMER3-211ENST00000599808 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
HOMER3-211ENST00000599808 TSPOAP1O95153 1857 aa21.95■■□□□ 1.1
HOMER3-211ENST00000599808 KDM6BO15054 1643 aa21.92■■□□□ 1.1
HOMER3-211ENST00000599808 IGF1RP08069 1367 aa21.92■■□□□ 1.1
HOMER3-211ENST00000599808 CUL7Q14999 1698 aa21.91■■□□□ 1.1
HOMER3-211ENST00000599808 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
HOMER3-211ENST00000599808 KDM4FA0A1W2PPD8 638 aa21.85■■□□□ 1.09
HOMER3-211ENST00000599808 PTPRGP23470 1445 aa21.81■■□□□ 1.08
HOMER3-211ENST00000599808 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
HOMER3-211ENST00000599808 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
HOMER3-211ENST00000599808 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
HOMER3-211ENST00000599808 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
HOMER3-211ENST00000599808 TNIKQ9UKE5 1360 aa21.74■■□□□ 1.07
HOMER3-211ENST00000599808 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
HOMER3-211ENST00000599808 IQGAP2Q13576 1575 aa21.72■■□□□ 1.07
HOMER3-211ENST00000599808 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
HOMER3-211ENST00000599808 GLI2P10070 1586 aa21.71■■□□□ 1.07
HOMER3-211ENST00000599808 PLB1Q6P1J6 1458 aa21.7■■□□□ 1.06
HOMER3-211ENST00000599808 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
HOMER3-211ENST00000599808 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
HOMER3-211ENST00000599808 UACAQ9BZF9 1416 aa21.64■■□□□ 1.06
HOMER3-211ENST00000599808 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
HOMER3-211ENST00000599808 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
HOMER3-211ENST00000599808 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
HOMER3-211ENST00000599808 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
HOMER3-211ENST00000599808 EPRSP07814 1512 aaKnown RBP21.59■■□□□ 1.05
HOMER3-211ENST00000599808 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.04
HOMER3-211ENST00000599808 UGGT2Q9NYU1 1516 aa21.56■■□□□ 1.04
HOMER3-211ENST00000599808 KIAA0556O60303 1618 aa21.54■■□□□ 1.04
HOMER3-211ENST00000599808 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.04
HOMER3-211ENST00000599808 ILDR1Q86SU0 546 aaPredicted RBP21.52■■□□□ 1.04
HOMER3-211ENST00000599808 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.03
HOMER3-211ENST00000599808 WDR7Q9Y4E6 1490 aa21.45■■□□□ 1.02
HOMER3-211ENST00000599808 CTTNBP2Q8WZ74 1663 aa21.43■■□□□ 1.02
HOMER3-211ENST00000599808 HECW2Q9P2P5 1572 aa21.42■■□□□ 1.02
HOMER3-211ENST00000599808 CFAP43Q8NDM7 1665 aa21.38■■□□□ 1.01
HOMER3-211ENST00000599808 ABCA8O94911 1581 aa21.36■■□□□ 1.01
HOMER3-211ENST00000599808 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
HOMER3-211ENST00000599808 CD109Q6YHK3 1445 aa21.35■■□□□ 1.01
HOMER3-211ENST00000599808 GOLGA3Q08378 1498 aa21.32■■□□□ 1
HOMER3-211ENST00000599808 KCNH8Q96L42 1107 aa21.32■■□□□ 1
HOMER3-211ENST00000599808 KIF21BO75037 1637 aa21.27■■□□□ 1
HOMER3-211ENST00000599808 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
HOMER3-211ENST00000599808 ARAP3Q8WWN8 1544 aa21.2■□□□□ 0.98
HOMER3-211ENST00000599808 ARID3CA6NKF2 412 aa21.17■□□□□ 0.98
HOMER3-211ENST00000599808 ATP10BO94823 1461 aa21.17■□□□□ 0.98
HOMER3-211ENST00000599808 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
HOMER3-211ENST00000599808 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
HOMER3-211ENST00000599808 ADAMTSL3P82987 1691 aa21.12■□□□□ 0.97
HOMER3-211ENST00000599808 PHLDB1Q86UU1 1377 aa21.09■□□□□ 0.97
HOMER3-211ENST00000599808 SAMD9Q5K651 1589 aa21.08■□□□□ 0.97
HOMER3-211ENST00000599808 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.97
HOMER3-211ENST00000599808 PTPRMP28827 1452 aa21.07■□□□□ 0.96
HOMER3-211ENST00000599808 RAPGEF6Q8TEU7 1601 aa21.07■□□□□ 0.96
HOMER3-211ENST00000599808 RAPGEF3O95398 923 aa21.06■□□□□ 0.96
HOMER3-211ENST00000599808 NEO1Q92859 1461 aa21.05■□□□□ 0.96
HOMER3-211ENST00000599808 FRMPD1Q5SYB0 1578 aa21.04■□□□□ 0.96
HOMER3-211ENST00000599808 BCORL1Q5H9F3 1711 aa21.04■□□□□ 0.96
HOMER3-211ENST00000599808 FBXO41Q8TF61 875 aa21.01■□□□□ 0.95
HOMER3-211ENST00000599808 MADDQ8WXG6 1647 aa21■□□□□ 0.95
HOMER3-211ENST00000599808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
HOMER3-211ENST00000599808 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
HOMER3-211ENST00000599808 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
HOMER3-211ENST00000599808 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
HOMER3-211ENST00000599808 ARID4BQ4LE39 1312 aaPredicted RBP20.95■□□□□ 0.94
HOMER3-211ENST00000599808 PCF11O94913 1555 aaKnown RBP20.94■□□□□ 0.94
HOMER3-211ENST00000599808 RICTORQ6R327 1708 aa20.94■□□□□ 0.94
HOMER3-211ENST00000599808 ARHGEF40Q8TER5 1519 aa20.93■□□□□ 0.94
HOMER3-211ENST00000599808 RIMS1Q86UR5 1692 aaKnown RBP20.93■□□□□ 0.94
HOMER3-211ENST00000599808 LMTK3Q96Q04 1460 aa20.92■□□□□ 0.94
HOMER3-211ENST00000599808 FHOD3Q2V2M9 1422 aa20.9■□□□□ 0.94
HOMER3-211ENST00000599808 DENND4BO75064 1496 aaPredicted RBP20.89■□□□□ 0.94
HOMER3-211ENST00000599808 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-211ENST00000599808 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
HOMER3-211ENST00000599808 CFAP74Q9C0B2 1584 aa20.86■□□□□ 0.93
HOMER3-211ENST00000599808 PLEKHD1A6NEE1 506 aa20.86■□□□□ 0.93
HOMER3-211ENST00000599808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.86■□□□□ 0.93
HOMER3-211ENST00000599808 FANCAO15360 1455 aa20.86■□□□□ 0.93
HOMER3-211ENST00000599808 SIGLEC1Q9BZZ2 1709 aa20.85■□□□□ 0.93
HOMER3-211ENST00000599808 TTC37Q6PGP7 1564 aa20.85■□□□□ 0.93
HOMER3-211ENST00000599808 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.92
HOMER3-211ENST00000599808 YEATS2Q9ULM3 1422 aa20.79■□□□□ 0.92
HOMER3-211ENST00000599808 ZFYVE16Q7Z3T8 1539 aa20.79■□□□□ 0.92
HOMER3-211ENST00000599808 EEA1Q15075 1411 aa20.78■□□□□ 0.92
HOMER3-211ENST00000599808 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
HOMER3-211ENST00000599808 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
HOMER3-211ENST00000599808 HSPA2P54652 639 aa20.78■□□□□ 0.92
HOMER3-211ENST00000599808 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
HOMER3-211ENST00000599808 HECW1Q76N89 1606 aa20.76■□□□□ 0.91
HOMER3-211ENST00000599808 FER1L4A9Z1Z3 1794 aa20.76■□□□□ 0.91
HOMER3-211ENST00000599808 CDK13Q14004 1512 aaKnown RBP20.75■□□□□ 0.91
HOMER3-211ENST00000599808 MAGI2Q86UL8 1455 aa20.75■□□□□ 0.91
HOMER3-211ENST00000599808 MLECQ14165 292 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms