RNA–Protein interactions for RNA: ENST00000597476.5

RAB4B-204, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB4B, Length 1,982 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-204ENST00000597476 ADAMTS12P58397 1594 aa22.45■■□□□ 1.18
RAB4B-204ENST00000597476 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
RAB4B-204ENST00000597476 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
RAB4B-204ENST00000597476 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
RAB4B-204ENST00000597476 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
RAB4B-204ENST00000597476 FHOD3Q2V2M9 1422 aa22.3■■□□□ 1.16
RAB4B-204ENST00000597476 EFCAB5A4FU69 1503 aa22.26■■□□□ 1.15
RAB4B-204ENST00000597476 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
RAB4B-204ENST00000597476 KANK4Q5T7N3 995 aaPredicted RBP22.23■■□□□ 1.15
RAB4B-204ENST00000597476 PCF11O94913 1555 aaKnown RBP22.22■■□□□ 1.15
RAB4B-204ENST00000597476 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
RAB4B-204ENST00000597476 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
RAB4B-204ENST00000597476 APLP2Q06481 763 aa22.21■■□□□ 1.15
RAB4B-204ENST00000597476 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
RAB4B-204ENST00000597476 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
RAB4B-204ENST00000597476 HRCP23327 699 aa22.14■■□□□ 1.14
RAB4B-204ENST00000597476 CEP170Q5SW79 1584 aa22.14■■□□□ 1.14
RAB4B-204ENST00000597476 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
RAB4B-204ENST00000597476 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
RAB4B-204ENST00000597476 KIAA0586Q9BVV6 1533 aa22.09■■□□□ 1.13
RAB4B-204ENST00000597476 FBLN2P98095 1184 aa22.09■■□□□ 1.13
RAB4B-204ENST00000597476 UGGT2Q9NYU1 1516 aa22.08■■□□□ 1.13
RAB4B-204ENST00000597476 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
RAB4B-204ENST00000597476 LRRIQ1Q96JM4 1722 aa22.08■■□□□ 1.12
RAB4B-204ENST00000597476 CASKIN1Q8WXD9 1431 aa22.08■■□□□ 1.12
RAB4B-204ENST00000597476 FYCO1Q9BQS8 1478 aa22.07■■□□□ 1.12
RAB4B-204ENST00000597476 MAP3K1Q13233 1512 aa22.05■■□□□ 1.12
RAB4B-204ENST00000597476 FMN1Q68DA7 1419 aa22.05■■□□□ 1.12
RAB4B-204ENST00000597476 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
RAB4B-204ENST00000597476 NUP160Q12769 1436 aa22.04■■□□□ 1.12
RAB4B-204ENST00000597476 DISP1Q96F81 1524 aa22.03■■□□□ 1.12
RAB4B-204ENST00000597476 LRRC9Q6ZRR7 1453 aa22.01■■□□□ 1.11
RAB4B-204ENST00000597476 KIAA0556O60303 1618 aa22■■□□□ 1.11
RAB4B-204ENST00000597476 CHD1O14646 1710 aa21.99■■□□□ 1.11
RAB4B-204ENST00000597476 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
RAB4B-204ENST00000597476 RRBP1Q9P2E9 1410 aaKnown RBP21.9■■□□□ 1.1
RAB4B-204ENST00000597476 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.09
RAB4B-204ENST00000597476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.88■■□□□ 1.09
RAB4B-204ENST00000597476 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
RAB4B-204ENST00000597476 MAGI3Q5TCQ9 1506 aa21.86■■□□□ 1.09
RAB4B-204ENST00000597476 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
RAB4B-204ENST00000597476 CDK13Q14004 1512 aaKnown RBP21.84■■□□□ 1.09
RAB4B-204ENST00000597476 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
RAB4B-204ENST00000597476 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
RAB4B-204ENST00000597476 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
RAB4B-204ENST00000597476 RAPGEF6Q8TEU7 1601 aa21.79■■□□□ 1.08
RAB4B-204ENST00000597476 NUP153P49790 1475 aaKnown RBP21.78■■□□□ 1.08
RAB4B-204ENST00000597476 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
RAB4B-204ENST00000597476 MTUS2Q5JR59 1369 aa21.77■■□□□ 1.08
RAB4B-204ENST00000597476 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
RAB4B-204ENST00000597476 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
RAB4B-204ENST00000597476 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
RAB4B-204ENST00000597476 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
RAB4B-204ENST00000597476 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
RAB4B-204ENST00000597476 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
RAB4B-204ENST00000597476 ERCC6L2Q5T890 1561 aa21.71■■□□□ 1.07
RAB4B-204ENST00000597476 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
RAB4B-204ENST00000597476 SUPT6HQ7KZ85 1726 aaKnown RBP21.71■■□□□ 1.07
RAB4B-204ENST00000597476 ARHGEF11O15085 1522 aa21.69■■□□□ 1.06
RAB4B-204ENST00000597476 ITGAEP38570 1179 aa21.68■■□□□ 1.06
RAB4B-204ENST00000597476 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
RAB4B-204ENST00000597476 ABCA8O94911 1581 aa21.67■■□□□ 1.06
RAB4B-204ENST00000597476 FGD6Q6ZV73 1430 aa21.65■■□□□ 1.06
RAB4B-204ENST00000597476 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
RAB4B-204ENST00000597476 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
RAB4B-204ENST00000597476 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
RAB4B-204ENST00000597476 PTPRGP23470 1445 aa21.58■■□□□ 1.05
RAB4B-204ENST00000597476 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
RAB4B-204ENST00000597476 ATP10BO94823 1461 aa21.55■■□□□ 1.04
RAB4B-204ENST00000597476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.54■■□□□ 1.04
RAB4B-204ENST00000597476 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
RAB4B-204ENST00000597476 KIF14Q15058 1648 aa21.53■■□□□ 1.04
RAB4B-204ENST00000597476 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
RAB4B-204ENST00000597476 TCOF1Q13428 1488 aaKnown RBP21.47■■□□□ 1.03
RAB4B-204ENST00000597476 RAB3GAP2Q9H2M9 1393 aa21.47■■□□□ 1.03
RAB4B-204ENST00000597476 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
RAB4B-204ENST00000597476 UACAQ9BZF9 1416 aa21.47■■□□□ 1.03
RAB4B-204ENST00000597476 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
RAB4B-204ENST00000597476 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
RAB4B-204ENST00000597476 SETD5Q9C0A6 1442 aa21.43■■□□□ 1.02
RAB4B-204ENST00000597476 MIA2Q96PC5 1412 aa21.42■■□□□ 1.02
RAB4B-204ENST00000597476 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
RAB4B-204ENST00000597476 ZNF644Q9H582 1327 aaPredicted RBP21.39■■□□□ 1.02
RAB4B-204ENST00000597476 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
RAB4B-204ENST00000597476 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
RAB4B-204ENST00000597476 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
RAB4B-204ENST00000597476 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
RAB4B-204ENST00000597476 ITSN2Q9NZM3 1697 aa21.34■■□□□ 1.01
RAB4B-204ENST00000597476 ZCCHC11Q5TAX3 1644 aaKnown RBP21.32■■□□□ 1
RAB4B-204ENST00000597476 OSCARQ8IYS5 282 aa21.32■■□□□ 1
RAB4B-204ENST00000597476 HFM1A2PYH4 1435 aa21.31■■□□□ 1
RAB4B-204ENST00000597476 CHIC2Q9UKJ5 165 aa21.31■■□□□ 1
RAB4B-204ENST00000597476 NAIPQ13075 1403 aa21.31■■□□□ 1
RAB4B-204ENST00000597476 UHRF1BP1LA0JNW5 1464 aa21.3■■□□□ 1
RAB4B-204ENST00000597476 CAMSAP2Q08AD1 1489 aa21.3■■□□□ 1
RAB4B-204ENST00000597476 MAPKBP1O60336 1514 aa21.3■■□□□ 1
RAB4B-204ENST00000597476 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
RAB4B-204ENST00000597476 ABCC5O15440 1437 aa21.28■■□□□ 1
RAB4B-204ENST00000597476 DAPK1P53355 1430 aa21.28■■□□□ 1
RAB4B-204ENST00000597476 CFDP1Q9UEE9 299 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms