RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 NUP160Q12769 1436 aa15.51■□□□□ 0.07
FARP1-217ENST00000596467 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
FARP1-217ENST00000596467 ABCC10Q5T3U5 1492 aa15.42■□□□□ 0.06
FARP1-217ENST00000596467 ILDR1Q86SU0 546 aaPredicted RBP15.41■□□□□ 0.06
FARP1-217ENST00000596467 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
FARP1-217ENST00000596467 KCNA4P22459 653 aa15.4■□□□□ 0.06
FARP1-217ENST00000596467 DIP2BQ9P265 1576 aa15.4■□□□□ 0.06
FARP1-217ENST00000596467 KDM6BO15054 1643 aa15.39■□□□□ 0.05
FARP1-217ENST00000596467 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
FARP1-217ENST00000596467 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
FARP1-217ENST00000596467 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
FARP1-217ENST00000596467 FAM69CQ0P6D2 419 aa15.35■□□□□ 0.05
FARP1-217ENST00000596467 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
FARP1-217ENST00000596467 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
FARP1-217ENST00000596467 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
FARP1-217ENST00000596467 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
FARP1-217ENST00000596467 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
FARP1-217ENST00000596467 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
FARP1-217ENST00000596467 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
FARP1-217ENST00000596467 JPH4Q96JJ6 628 aa15.29■□□□□ 0.04
FARP1-217ENST00000596467 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
FARP1-217ENST00000596467 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
FARP1-217ENST00000596467 ADGRL1O94910 1474 aa15.16■□□□□ 0.02
FARP1-217ENST00000596467 GLI2P10070 1586 aa15.15■□□□□ 0.02
FARP1-217ENST00000596467 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
FARP1-217ENST00000596467 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
FARP1-217ENST00000596467 KIAA0586Q9BVV6 1533 aa15.12■□□□□ 0.01
FARP1-217ENST00000596467 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
FARP1-217ENST00000596467 ABCC2Q92887 1545 aa15.07■□□□□ 0
FARP1-217ENST00000596467 CUL7Q14999 1698 aa15.06■□□□□ 0
FARP1-217ENST00000596467 MAP3K4Q9Y6R4 1608 aa15.06■□□□□ 0
FARP1-217ENST00000596467 ASXL2Q76L83 1435 aa15.04■□□□□ -0
FARP1-217ENST00000596467 PTPRGP23470 1445 aa15.03■□□□□ -0
FARP1-217ENST00000596467 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
FARP1-217ENST00000596467 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
FARP1-217ENST00000596467 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
FARP1-217ENST00000596467 UHRF1BP1LA0JNW5 1464 aa15.01□□□□□ -0.01
FARP1-217ENST00000596467 TEX14Q8IWB6 1497 aa15□□□□□ -0.01
FARP1-217ENST00000596467 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
FARP1-217ENST00000596467 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
FARP1-217ENST00000596467 CARMIL2Q6F5E8 1435 aa14.97□□□□□ -0.01
FARP1-217ENST00000596467 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
FARP1-217ENST00000596467 IGF1RP08069 1367 aa14.96□□□□□ -0.02
FARP1-217ENST00000596467 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
FARP1-217ENST00000596467 IQGAP2Q13576 1575 aa14.93□□□□□ -0.02
FARP1-217ENST00000596467 UACAQ9BZF9 1416 aa14.92□□□□□ -0.02
FARP1-217ENST00000596467 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
FARP1-217ENST00000596467 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
FARP1-217ENST00000596467 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
FARP1-217ENST00000596467 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
FARP1-217ENST00000596467 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
FARP1-217ENST00000596467 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
FARP1-217ENST00000596467 KIF21BO75037 1637 aa14.84□□□□□ -0.03
FARP1-217ENST00000596467 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
FARP1-217ENST00000596467 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
FARP1-217ENST00000596467 WDR7Q9Y4E6 1490 aa14.83□□□□□ -0.03
FARP1-217ENST00000596467 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
FARP1-217ENST00000596467 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
FARP1-217ENST00000596467 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
FARP1-217ENST00000596467 ADAMTSL3P82987 1691 aa14.8□□□□□ -0.04
FARP1-217ENST00000596467 KIAA0556O60303 1618 aa14.79□□□□□ -0.04
FARP1-217ENST00000596467 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
FARP1-217ENST00000596467 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
FARP1-217ENST00000596467 CD109Q6YHK3 1445 aa14.77□□□□□ -0.04
FARP1-217ENST00000596467 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
FARP1-217ENST00000596467 PTPRMP28827 1452 aa14.75□□□□□ -0.05
FARP1-217ENST00000596467 PCF11O94913 1555 aaKnown RBP14.72□□□□□ -0.05
FARP1-217ENST00000596467 BCORL1Q5H9F3 1711 aa14.71□□□□□ -0.05
FARP1-217ENST00000596467 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.06
FARP1-217ENST00000596467 LMTK3Q96Q04 1460 aa14.7□□□□□ -0.06
FARP1-217ENST00000596467 ABCA8O94911 1581 aa14.69□□□□□ -0.06
FARP1-217ENST00000596467 PHLDB1Q86UU1 1377 aa14.67□□□□□ -0.06
FARP1-217ENST00000596467 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
FARP1-217ENST00000596467 MADDQ8WXG6 1647 aa14.66□□□□□ -0.06
FARP1-217ENST00000596467 ABCA9Q8IUA7 1624 aa14.64□□□□□ -0.07
FARP1-217ENST00000596467 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
FARP1-217ENST00000596467 KCNH8Q96L42 1107 aa14.63□□□□□ -0.07
FARP1-217ENST00000596467 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
FARP1-217ENST00000596467 RIMS1Q86UR5 1692 aaKnown RBP14.6□□□□□ -0.07
FARP1-217ENST00000596467 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
FARP1-217ENST00000596467 FRMPD1Q5SYB0 1578 aa14.59□□□□□ -0.07
FARP1-217ENST00000596467 NEO1Q92859 1461 aa14.58□□□□□ -0.08
FARP1-217ENST00000596467 SOCS7O14512 581 aa14.56□□□□□ -0.08
FARP1-217ENST00000596467 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
FARP1-217ENST00000596467 RICTORQ6R327 1708 aa14.55□□□□□ -0.08
FARP1-217ENST00000596467 ARHGEF40Q8TER5 1519 aa14.54□□□□□ -0.08
FARP1-217ENST00000596467 ATP10BO94823 1461 aa14.52□□□□□ -0.08
FARP1-217ENST00000596467 RAPGEF3O95398 923 aa14.52□□□□□ -0.09
FARP1-217ENST00000596467 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
FARP1-217ENST00000596467 ILDR2Q71H61 639 aa14.5□□□□□ -0.09
FARP1-217ENST00000596467 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
FARP1-217ENST00000596467 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
FARP1-217ENST00000596467 PREX1Q8TCU6 1659 aa14.47□□□□□ -0.09
FARP1-217ENST00000596467 HSPA2P54652 639 aa14.47□□□□□ -0.09
FARP1-217ENST00000596467 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
FARP1-217ENST00000596467 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
FARP1-217ENST00000596467 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
FARP1-217ENST00000596467 SIGLEC1Q9BZZ2 1709 aa14.46□□□□□ -0.09
FARP1-217ENST00000596467 FANCAO15360 1455 aa14.46□□□□□ -0.09
FARP1-217ENST00000596467 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms