RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 ZNF608Q9ULD9 1512 aaPredicted RBP22.44■■□□□ 1.18
PAF1-204ENST00000595564 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
PAF1-204ENST00000595564 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
PAF1-204ENST00000595564 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
PAF1-204ENST00000595564 EFCAB5A4FU69 1503 aa22.35■■□□□ 1.17
PAF1-204ENST00000595564 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
PAF1-204ENST00000595564 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
PAF1-204ENST00000595564 FHOD3Q2V2M9 1422 aa22.3■■□□□ 1.16
PAF1-204ENST00000595564 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
PAF1-204ENST00000595564 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.15
PAF1-204ENST00000595564 SAMD9Q5K651 1589 aa22.23■■□□□ 1.15
PAF1-204ENST00000595564 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
PAF1-204ENST00000595564 MAP3K1Q13233 1512 aa22.19■■□□□ 1.14
PAF1-204ENST00000595564 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
PAF1-204ENST00000595564 TIAM1Q13009 1591 aa22.19■■□□□ 1.14
PAF1-204ENST00000595564 IQGAP2Q13576 1575 aa22.19■■□□□ 1.14
PAF1-204ENST00000595564 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
PAF1-204ENST00000595564 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
PAF1-204ENST00000595564 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
PAF1-204ENST00000595564 CASKIN1Q8WXD9 1431 aa22.15■■□□□ 1.14
PAF1-204ENST00000595564 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
PAF1-204ENST00000595564 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
PAF1-204ENST00000595564 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
PAF1-204ENST00000595564 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
PAF1-204ENST00000595564 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
PAF1-204ENST00000595564 LRRC9Q6ZRR7 1453 aa22.09■■□□□ 1.13
PAF1-204ENST00000595564 KIAA0586Q9BVV6 1533 aa22.09■■□□□ 1.13
PAF1-204ENST00000595564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.12
PAF1-204ENST00000595564 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
PAF1-204ENST00000595564 UGGT2Q9NYU1 1516 aa22.07■■□□□ 1.12
PAF1-204ENST00000595564 FBLN2P98095 1184 aa22.06■■□□□ 1.12
PAF1-204ENST00000595564 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
PAF1-204ENST00000595564 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
PAF1-204ENST00000595564 CEP170Q5SW79 1584 aa22.02■■□□□ 1.12
PAF1-204ENST00000595564 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
PAF1-204ENST00000595564 NUP160Q12769 1436 aa21.97■■□□□ 1.11
PAF1-204ENST00000595564 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
PAF1-204ENST00000595564 KIAA0556O60303 1618 aa21.96■■□□□ 1.11
PAF1-204ENST00000595564 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
PAF1-204ENST00000595564 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
PAF1-204ENST00000595564 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
PAF1-204ENST00000595564 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
PAF1-204ENST00000595564 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.09
PAF1-204ENST00000595564 CCDC18Q5T9S5 1454 aa21.89■■□□□ 1.09
PAF1-204ENST00000595564 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
PAF1-204ENST00000595564 EPRSP07814 1512 aaKnown RBP21.83■■□□□ 1.09
PAF1-204ENST00000595564 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
PAF1-204ENST00000595564 CARMIL2Q6F5E8 1435 aa21.82■■□□□ 1.08
PAF1-204ENST00000595564 CHD1O14646 1710 aa21.81■■□□□ 1.08
PAF1-204ENST00000595564 ITGAEP38570 1179 aa21.8■■□□□ 1.08
PAF1-204ENST00000595564 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
PAF1-204ENST00000595564 FAM50AQ14320 339 aaKnown RBP21.78■■□□□ 1.08
PAF1-204ENST00000595564 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
PAF1-204ENST00000595564 RAPGEF6Q8TEU7 1601 aa21.78■■□□□ 1.08
PAF1-204ENST00000595564 SUPT6HQ7KZ85 1726 aaKnown RBP21.78■■□□□ 1.08
PAF1-204ENST00000595564 NCOA2Q15596 1464 aa21.77■■□□□ 1.08
PAF1-204ENST00000595564 ARID3CA6NKF2 412 aa21.77■■□□□ 1.08
PAF1-204ENST00000595564 NUP153P49790 1475 aaKnown RBP21.74■■□□□ 1.07
PAF1-204ENST00000595564 FGD6Q6ZV73 1430 aa21.73■■□□□ 1.07
PAF1-204ENST00000595564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
PAF1-204ENST00000595564 MYOM3Q5VTT5 1437 aa21.7■■□□□ 1.06
PAF1-204ENST00000595564 PLB1Q6P1J6 1458 aa21.7■■□□□ 1.06
PAF1-204ENST00000595564 ARHGEF11O15085 1522 aa21.69■■□□□ 1.06
PAF1-204ENST00000595564 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
PAF1-204ENST00000595564 CDK11AQ9UQ88 783 aaPredicted RBP21.64■■□□□ 1.05
PAF1-204ENST00000595564 ABCA8O94911 1581 aa21.62■■□□□ 1.05
PAF1-204ENST00000595564 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
PAF1-204ENST00000595564 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
PAF1-204ENST00000595564 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
PAF1-204ENST00000595564 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
PAF1-204ENST00000595564 PTPN23Q9H3S7 1636 aa21.59■■□□□ 1.05
PAF1-204ENST00000595564 PTPRGP23470 1445 aa21.59■■□□□ 1.05
PAF1-204ENST00000595564 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
PAF1-204ENST00000595564 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
PAF1-204ENST00000595564 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
PAF1-204ENST00000595564 TCOF1Q13428 1488 aaKnown RBP21.54■■□□□ 1.04
PAF1-204ENST00000595564 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
PAF1-204ENST00000595564 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
PAF1-204ENST00000595564 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
PAF1-204ENST00000595564 ATP10BO94823 1461 aa21.5■■□□□ 1.03
PAF1-204ENST00000595564 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
PAF1-204ENST00000595564 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
PAF1-204ENST00000595564 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
PAF1-204ENST00000595564 UACAQ9BZF9 1416 aa21.46■■□□□ 1.03
PAF1-204ENST00000595564 KIF14Q15058 1648 aa21.45■■□□□ 1.02
PAF1-204ENST00000595564 HFM1A2PYH4 1435 aa21.43■■□□□ 1.02
PAF1-204ENST00000595564 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.02
PAF1-204ENST00000595564 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.01
PAF1-204ENST00000595564 RIMBP3CA6NJZ7 1639 aa21.39■■□□□ 1.01
PAF1-204ENST00000595564 RIMBP3BA6NNM3 1639 aa21.39■■□□□ 1.01
PAF1-204ENST00000595564 RIMBP3Q9UFD9 1639 aa21.39■■□□□ 1.01
PAF1-204ENST00000595564 NAIPQ13075 1403 aa21.38■■□□□ 1.01
PAF1-204ENST00000595564 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
PAF1-204ENST00000595564 ABCC2Q92887 1545 aa21.37■■□□□ 1.01
PAF1-204ENST00000595564 ZNF644Q9H582 1327 aaPredicted RBP21.37■■□□□ 1.01
PAF1-204ENST00000595564 CFDP1Q9UEE9 299 aaPredicted RBP21.37■■□□□ 1.01
PAF1-204ENST00000595564 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
PAF1-204ENST00000595564 ABCC10Q5T3U5 1492 aa21.34■■□□□ 1.01
PAF1-204ENST00000595564 DAPK1P53355 1430 aa21.34■■□□□ 1.01
PAF1-204ENST00000595564 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms