RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
SMG9-202ENST00000594081 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
SMG9-202ENST00000594081 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.07
SMG9-202ENST00000594081 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
SMG9-202ENST00000594081 KDM6BO15054 1643 aa15.49■□□□□ 0.07
SMG9-202ENST00000594081 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
SMG9-202ENST00000594081 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
SMG9-202ENST00000594081 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
SMG9-202ENST00000594081 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMG9-202ENST00000594081 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
SMG9-202ENST00000594081 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
SMG9-202ENST00000594081 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
SMG9-202ENST00000594081 CUL7Q14999 1698 aa15.33■□□□□ 0.04
SMG9-202ENST00000594081 PPRC1Q5VV67 1664 aaKnown RBP15.31■□□□□ 0.04
SMG9-202ENST00000594081 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.04
SMG9-202ENST00000594081 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
SMG9-202ENST00000594081 GLI2P10070 1586 aa15.25■□□□□ 0.03
SMG9-202ENST00000594081 ABCC2Q92887 1545 aa15.25■□□□□ 0.03
SMG9-202ENST00000594081 PTPRGP23470 1445 aa15.23■□□□□ 0.03
SMG9-202ENST00000594081 ASXL2Q76L83 1435 aa15.22■□□□□ 0.03
SMG9-202ENST00000594081 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
SMG9-202ENST00000594081 IGF1RP08069 1367 aa15.21■□□□□ 0.02
SMG9-202ENST00000594081 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
SMG9-202ENST00000594081 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
SMG9-202ENST00000594081 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
SMG9-202ENST00000594081 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
SMG9-202ENST00000594081 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
SMG9-202ENST00000594081 UHRF1BP1LA0JNW5 1464 aa15.18■□□□□ 0.02
SMG9-202ENST00000594081 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
SMG9-202ENST00000594081 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
SMG9-202ENST00000594081 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
SMG9-202ENST00000594081 ZCCHC11Q5TAX3 1644 aaKnown RBP15.14■□□□□ 0.01
SMG9-202ENST00000594081 EPRSP07814 1512 aaKnown RBP15.13■□□□□ 0.01
SMG9-202ENST00000594081 UACAQ9BZF9 1416 aa15.13■□□□□ 0.01
SMG9-202ENST00000594081 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
SMG9-202ENST00000594081 DISP1Q96F81 1524 aa15.12■□□□□ 0.01
SMG9-202ENST00000594081 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
SMG9-202ENST00000594081 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
SMG9-202ENST00000594081 KIAA0556O60303 1618 aa15.07■□□□□ 0
SMG9-202ENST00000594081 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
SMG9-202ENST00000594081 WDR7Q9Y4E6 1490 aa15.03■□□□□ -0
SMG9-202ENST00000594081 CFAP43Q8NDM7 1665 aa15.02□□□□□ -0.01
SMG9-202ENST00000594081 KIF21BO75037 1637 aa15□□□□□ -0.01
SMG9-202ENST00000594081 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
SMG9-202ENST00000594081 MAGI3Q5TCQ9 1506 aa14.97□□□□□ -0.01
SMG9-202ENST00000594081 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
SMG9-202ENST00000594081 ABCA8O94911 1581 aa14.94□□□□□ -0.02
SMG9-202ENST00000594081 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
SMG9-202ENST00000594081 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
SMG9-202ENST00000594081 ADAMTSL3P82987 1691 aa14.87□□□□□ -0.03
SMG9-202ENST00000594081 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
SMG9-202ENST00000594081 FBXO41Q8TF61 875 aa14.86□□□□□ -0.03
SMG9-202ENST00000594081 KCNH8Q96L42 1107 aa14.84□□□□□ -0.03
SMG9-202ENST00000594081 PTPRMP28827 1452 aa14.83□□□□□ -0.03
SMG9-202ENST00000594081 ABCA9Q8IUA7 1624 aa14.82□□□□□ -0.04
SMG9-202ENST00000594081 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
SMG9-202ENST00000594081 BCORL1Q5H9F3 1711 aa14.8□□□□□ -0.04
SMG9-202ENST00000594081 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
SMG9-202ENST00000594081 MADDQ8WXG6 1647 aa14.8□□□□□ -0.04
SMG9-202ENST00000594081 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
SMG9-202ENST00000594081 ARHGEF40Q8TER5 1519 aa14.75□□□□□ -0.05
SMG9-202ENST00000594081 ATP10BO94823 1461 aa14.75□□□□□ -0.05
SMG9-202ENST00000594081 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
SMG9-202ENST00000594081 NEO1Q92859 1461 aa14.74□□□□□ -0.05
SMG9-202ENST00000594081 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
SMG9-202ENST00000594081 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
SMG9-202ENST00000594081 PRXQ9BXM0 1461 aa14.73□□□□□ -0.05
SMG9-202ENST00000594081 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
SMG9-202ENST00000594081 SAMD9Q5K651 1589 aa14.71□□□□□ -0.05
SMG9-202ENST00000594081 RAPGEF3O95398 923 aa14.7□□□□□ -0.06
SMG9-202ENST00000594081 RICTORQ6R327 1708 aa14.69□□□□□ -0.06
SMG9-202ENST00000594081 CFAP74Q9C0B2 1584 aa14.66□□□□□ -0.06
SMG9-202ENST00000594081 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
SMG9-202ENST00000594081 SIGLEC1Q9BZZ2 1709 aa14.65□□□□□ -0.06
SMG9-202ENST00000594081 P3H3Q8IVL6 736 aa14.64□□□□□ -0.07
SMG9-202ENST00000594081 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
SMG9-202ENST00000594081 FANCAO15360 1455 aa14.63□□□□□ -0.07
SMG9-202ENST00000594081 ZMYM4Q5VZL5 1548 aa14.62□□□□□ -0.07
SMG9-202ENST00000594081 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
SMG9-202ENST00000594081 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
SMG9-202ENST00000594081 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
SMG9-202ENST00000594081 EFCAB5A4FU69 1503 aa14.61□□□□□ -0.07
SMG9-202ENST00000594081 ZFYVE16Q7Z3T8 1539 aa14.61□□□□□ -0.07
SMG9-202ENST00000594081 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
SMG9-202ENST00000594081 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
SMG9-202ENST00000594081 HSPA2P54652 639 aa14.59□□□□□ -0.07
SMG9-202ENST00000594081 AKNAQ7Z591 1439 aa14.58□□□□□ -0.07
SMG9-202ENST00000594081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMG9-202ENST00000594081 POGZQ7Z3K3 1410 aa14.58□□□□□ -0.08
SMG9-202ENST00000594081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
SMG9-202ENST00000594081 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
SMG9-202ENST00000594081 YEATS2Q9ULM3 1422 aa14.56□□□□□ -0.08
SMG9-202ENST00000594081 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
SMG9-202ENST00000594081 HECW1Q76N89 1606 aa14.55□□□□□ -0.08
SMG9-202ENST00000594081 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
SMG9-202ENST00000594081 MAGI2Q86UL8 1455 aa14.53□□□□□ -0.08
SMG9-202ENST00000594081 CERKQ8TCT0 537 aa14.53□□□□□ -0.08
SMG9-202ENST00000594081 ARHGEF12Q9NZN5 1544 aa14.51□□□□□ -0.09
SMG9-202ENST00000594081 CDK13Q14004 1512 aaKnown RBP14.47□□□□□ -0.09
SMG9-202ENST00000594081 PLEKHD1A6NEE1 506 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms