RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
RANBP3-229ENST00000592771 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
RANBP3-229ENST00000592771 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
RANBP3-229ENST00000592771 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
RANBP3-229ENST00000592771 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.055e-8■■■■■ 30.4
RANBP3-229ENST00000592771 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
RANBP3-229ENST00000592771 KANK4Q5T7N3 995 aaPredicted RBP21.57■■□□□ 1.04
RANBP3-229ENST00000592771 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
RANBP3-229ENST00000592771 TIAM1Q13009 1591 aa21.57■■□□□ 1.04
RANBP3-229ENST00000592771 SAMD9Q5K651 1589 aa21.56■■□□□ 1.04
RANBP3-229ENST00000592771 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
RANBP3-229ENST00000592771 PCF11O94913 1555 aaKnown RBP21.54■■□□□ 1.04
RANBP3-229ENST00000592771 FHOD3Q2V2M9 1422 aa21.53■■□□□ 1.04
RANBP3-229ENST00000592771 CFAP43Q8NDM7 1665 aa21.52■■□□□ 1.04
RANBP3-229ENST00000592771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
RANBP3-229ENST00000592771 FYCO1Q9BQS8 1478 aa21.5■■□□□ 1.03
RANBP3-229ENST00000592771 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
RANBP3-229ENST00000592771 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
RANBP3-229ENST00000592771 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
RANBP3-229ENST00000592771 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
RANBP3-229ENST00000592771 LRRC9Q6ZRR7 1453 aa21.45■■□□□ 1.02
RANBP3-229ENST00000592771 P3H3Q8IVL6 736 aa21.45■■□□□ 1.02
RANBP3-229ENST00000592771 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
RANBP3-229ENST00000592771 IQGAP2Q13576 1575 aa21.43■■□□□ 1.02
RANBP3-229ENST00000592771 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.02
RANBP3-229ENST00000592771 MAGI1Q96QZ7 1491 aaPredicted RBP21.37■■□□□ 1.01
RANBP3-229ENST00000592771 CCNB3Q8WWL7 1395 aa21.35■■□□□ 1.01
RANBP3-229ENST00000592771 UGGT2Q9NYU1 1516 aa21.35■■□□□ 1.01
RANBP3-229ENST00000592771 GRIN2AQ12879 1464 aa21.34■■□□□ 1.01
RANBP3-229ENST00000592771 KIAA0586Q9BVV6 1533 aa21.32■■□□□ 1
RANBP3-229ENST00000592771 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
RANBP3-229ENST00000592771 SYNJ2O15056 1496 aa21.28■■□□□ 1
RANBP3-229ENST00000592771 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
RANBP3-229ENST00000592771 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
RANBP3-229ENST00000592771 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
RANBP3-229ENST00000592771 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
RANBP3-229ENST00000592771 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
RANBP3-229ENST00000592771 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
RANBP3-229ENST00000592771 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
RANBP3-229ENST00000592771 HECW1Q76N89 1606 aa21.21■□□□□ 0.99
RANBP3-229ENST00000592771 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
RANBP3-229ENST00000592771 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
RANBP3-229ENST00000592771 NUP160Q12769 1436 aa21.19■□□□□ 0.98
RANBP3-229ENST00000592771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.18■□□□□ 0.98
RANBP3-229ENST00000592771 EHBP1L1Q8N3D4 1523 aa21.17■□□□□ 0.98
RANBP3-229ENST00000592771 MTUS2Q5JR59 1369 aa21.15■□□□□ 0.98
RANBP3-229ENST00000592771 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
RANBP3-229ENST00000592771 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
RANBP3-229ENST00000592771 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
RANBP3-229ENST00000592771 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
RANBP3-229ENST00000592771 ARHGEF11O15085 1522 aa21.12■□□□□ 0.97
RANBP3-229ENST00000592771 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
RANBP3-229ENST00000592771 FBLN2P98095 1184 aa21.12■□□□□ 0.97
RANBP3-229ENST00000592771 MAGI3Q5TCQ9 1506 aa21.11■□□□□ 0.97
RANBP3-229ENST00000592771 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
RANBP3-229ENST00000592771 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
RANBP3-229ENST00000592771 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
RANBP3-229ENST00000592771 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
RANBP3-229ENST00000592771 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
RANBP3-229ENST00000592771 MYOM3Q5VTT5 1437 aa21.05■□□□□ 0.96
RANBP3-229ENST00000592771 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
RANBP3-229ENST00000592771 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
RANBP3-229ENST00000592771 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
RANBP3-229ENST00000592771 NUP153P49790 1475 aaKnown RBP21.02■□□□□ 0.96
RANBP3-229ENST00000592771 ITGAEP38570 1179 aa21.02■□□□□ 0.95
RANBP3-229ENST00000592771 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
RANBP3-229ENST00000592771 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
RANBP3-229ENST00000592771 CARMIL2Q6F5E8 1435 aa21■□□□□ 0.95
RANBP3-229ENST00000592771 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
RANBP3-229ENST00000592771 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
RANBP3-229ENST00000592771 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.95
RANBP3-229ENST00000592771 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
RANBP3-229ENST00000592771 CHD1O14646 1710 aa20.95■□□□□ 0.94
RANBP3-229ENST00000592771 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
RANBP3-229ENST00000592771 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
RANBP3-229ENST00000592771 PTPRKQ15262 1439 aa20.9■□□□□ 0.94
RANBP3-229ENST00000592771 ABCA8O94911 1581 aa20.89■□□□□ 0.93
RANBP3-229ENST00000592771 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
RANBP3-229ENST00000592771 HFM1A2PYH4 1435 aa20.87■□□□□ 0.93
RANBP3-229ENST00000592771 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
RANBP3-229ENST00000592771 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
RANBP3-229ENST00000592771 CDK11AQ9UQ88 783 aaPredicted RBP20.84■□□□□ 0.93
RANBP3-229ENST00000592771 ADCY10Q96PN6 1610 aa20.83■□□□□ 0.93
RANBP3-229ENST00000592771 PRG4Q92954 1404 aaPredicted RBP20.82■□□□□ 0.92
RANBP3-229ENST00000592771 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
RANBP3-229ENST00000592771 NAIPQ13075 1403 aa20.8■□□□□ 0.92
RANBP3-229ENST00000592771 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
RANBP3-229ENST00000592771 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
RANBP3-229ENST00000592771 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
RANBP3-229ENST00000592771 GCC2Q8IWJ2 1684 aa20.76■□□□□ 0.91
RANBP3-229ENST00000592771 ATP10BO94823 1461 aa20.74■□□□□ 0.91
RANBP3-229ENST00000592771 PTPRGP23470 1445 aa20.74■□□□□ 0.91
RANBP3-229ENST00000592771 ITSN2Q9NZM3 1697 aa20.74■□□□□ 0.91
RANBP3-229ENST00000592771 KIF14Q15058 1648 aa20.73■□□□□ 0.91
RANBP3-229ENST00000592771 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
RANBP3-229ENST00000592771 DNMT1P26358 1616 aaKnown RBP20.72■□□□□ 0.91
RANBP3-229ENST00000592771 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
RANBP3-229ENST00000592771 GPATCH8Q9UKJ3 1502 aaKnown RBP20.69■□□□□ 0.9
RANBP3-229ENST00000592771 MIER1Q8N108 512 aa20.68■□□□□ 0.9
RANBP3-229ENST00000592771 DAPK1P53355 1430 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms