RNA–Protein interactions for RNA: ENST00000592145.1

TUBD1-213, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-213ENST00000592145 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
TUBD1-213ENST00000592145 SPOCK2Q92563 424 aa16.97■□□□□ 0.31
TUBD1-213ENST00000592145 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
TUBD1-213ENST00000592145 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
TUBD1-213ENST00000592145 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
TUBD1-213ENST00000592145 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
TUBD1-213ENST00000592145 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
TUBD1-213ENST00000592145 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
TUBD1-213ENST00000592145 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
TUBD1-213ENST00000592145 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
TUBD1-213ENST00000592145 MNX1P50219 401 aaPredicted RBP16.84■□□□□ 0.29
TUBD1-213ENST00000592145 POTEHQ6S545 545 aa16.84■□□□□ 0.29
TUBD1-213ENST00000592145 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
TUBD1-213ENST00000592145 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
TUBD1-213ENST00000592145 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
TUBD1-213ENST00000592145 WIZO95785 1651 aa16.76■□□□□ 0.27
TUBD1-213ENST00000592145 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
TUBD1-213ENST00000592145 NUBP1P53384 320 aa16.73■□□□□ 0.27
TUBD1-213ENST00000592145 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
TUBD1-213ENST00000592145 PKD2Q13563 968 aa16.67■□□□□ 0.26
TUBD1-213ENST00000592145 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
TUBD1-213ENST00000592145 GSE1Q14687 1217 aa16.63■□□□□ 0.25
TUBD1-213ENST00000592145 FAM212AQ96EL1 285 aa16.62■□□□□ 0.25
TUBD1-213ENST00000592145 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
TUBD1-213ENST00000592145 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
TUBD1-213ENST00000592145 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
TUBD1-213ENST00000592145 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
TUBD1-213ENST00000592145 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
TUBD1-213ENST00000592145 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
TUBD1-213ENST00000592145 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
TUBD1-213ENST00000592145 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
TUBD1-213ENST00000592145 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
TUBD1-213ENST00000592145 NESP48681 1621 aa16.41■□□□□ 0.22
TUBD1-213ENST00000592145 CFTRP13569 1480 aa16.41■□□□□ 0.22
TUBD1-213ENST00000592145 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
TUBD1-213ENST00000592145 RGL2O15211 777 aa16.38■□□□□ 0.21
TUBD1-213ENST00000592145 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
TUBD1-213ENST00000592145 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
TUBD1-213ENST00000592145 PYGBP11216 843 aa16.36■□□□□ 0.21
TUBD1-213ENST00000592145 CHRM1P11229 460 aaPredicted RBP16.35■□□□□ 0.21
TUBD1-213ENST00000592145 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
TUBD1-213ENST00000592145 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
TUBD1-213ENST00000592145 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
TUBD1-213ENST00000592145 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
TUBD1-213ENST00000592145 RNF25Q96BH1 459 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-213ENST00000592145 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
TUBD1-213ENST00000592145 FANCD2Q9BXW9 1451 aa16.23■□□□□ 0.19
TUBD1-213ENST00000592145 HAX1O00165 279 aa16.23■□□□□ 0.19
TUBD1-213ENST00000592145 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
TUBD1-213ENST00000592145 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
TUBD1-213ENST00000592145 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
TUBD1-213ENST00000592145 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
TUBD1-213ENST00000592145 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
TUBD1-213ENST00000592145 CUX2O14529 1486 aa16.17■□□□□ 0.18
TUBD1-213ENST00000592145 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
TUBD1-213ENST00000592145 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
TUBD1-213ENST00000592145 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
TUBD1-213ENST00000592145 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
TUBD1-213ENST00000592145 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
TUBD1-213ENST00000592145 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
TUBD1-213ENST00000592145 MAP3K13O43283 966 aa16.13■□□□□ 0.17
TUBD1-213ENST00000592145 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
TUBD1-213ENST00000592145 PCDHB13Q9Y5F0 798 aa16.13■□□□□ 0.17
TUBD1-213ENST00000592145 WDR62O43379 1518 aa16.12■□□□□ 0.17
TUBD1-213ENST00000592145 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
TUBD1-213ENST00000592145 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
TUBD1-213ENST00000592145 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
TUBD1-213ENST00000592145 EVX2Q03828 476 aa16.07■□□□□ 0.16
TUBD1-213ENST00000592145 IFNL1Q8IU54 200 aa16.06■□□□□ 0.16
TUBD1-213ENST00000592145 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
TUBD1-213ENST00000592145 HS6ST3Q8IZP7 471 aa16.04■□□□□ 0.16
TUBD1-213ENST00000592145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.03■□□□□ 0.16
TUBD1-213ENST00000592145 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
TUBD1-213ENST00000592145 PDAP1Q13442 181 aaKnown RBP16.02■□□□□ 0.16
TUBD1-213ENST00000592145 STK25O00506 426 aa16.01■□□□□ 0.15
TUBD1-213ENST00000592145 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
TUBD1-213ENST00000592145 TOPBP1Q92547 1522 aa15.99■□□□□ 0.15
TUBD1-213ENST00000592145 BBXQ8WY36 941 aaPredicted RBP15.99■□□□□ 0.15
TUBD1-213ENST00000592145 MS4A3Q96HJ5 214 aa15.99■□□□□ 0.15
TUBD1-213ENST00000592145 PSEN1P49768 467 aa15.97■□□□□ 0.15
TUBD1-213ENST00000592145 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
TUBD1-213ENST00000592145 CLCN6P51797 869 aa15.95■□□□□ 0.14
TUBD1-213ENST00000592145 STK24Q9Y6E0 443 aa15.95■□□□□ 0.14
TUBD1-213ENST00000592145 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
TUBD1-213ENST00000592145 CUX1P39880 1505 aa15.91■□□□□ 0.14
TUBD1-213ENST00000592145 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
TUBD1-213ENST00000592145 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
TUBD1-213ENST00000592145 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
TUBD1-213ENST00000592145 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.13
TUBD1-213ENST00000592145 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
TUBD1-213ENST00000592145 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
TUBD1-213ENST00000592145 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
TUBD1-213ENST00000592145 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
TUBD1-213ENST00000592145 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
TUBD1-213ENST00000592145 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
TUBD1-213ENST00000592145 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
TUBD1-213ENST00000592145 TMEM106CQ9BVX2 250 aa15.82■□□□□ 0.12
TUBD1-213ENST00000592145 TIE1P35590 1138 aa15.81■□□□□ 0.12
TUBD1-213ENST00000592145 SOGA1O94964 1423 aa15.8■□□□□ 0.12
TUBD1-213ENST00000592145 GABBR2O75899 941 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms