RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 JPH4Q96JJ6 628 aa40.42■■■■■ 4.06
LSM7-206ENST00000591515 ABCC10Q5T3U5 1492 aa40.42■■■■■ 4.06
LSM7-206ENST00000591515 DIP2BQ9P265 1576 aa40.38■■■■■ 4.05
LSM7-206ENST00000591515 MAPKBP1O60336 1514 aa40.37■■■■■ 4.05
LSM7-206ENST00000591515 FAM69CQ0P6D2 419 aa40.34■■■■■ 4.05
LSM7-206ENST00000591515 ADCY10Q96PN6 1610 aa40.33■■■■■ 4.05
LSM7-206ENST00000591515 NPM1P06748 294 aaKnown RBP eCLIP40.21■■■■■ 4.03
LSM7-206ENST00000591515 KDM6BO15054 1643 aa40.2■■■■■ 4.03
LSM7-206ENST00000591515 TSPOAP1O95153 1857 aa40.19■■■■■ 4.03
LSM7-206ENST00000591515 KDM4FA0A1W2PPD8 638 aa40.08■■■■■ 4.01
LSM7-206ENST00000591515 KIAA0586Q9BVV6 1533 aa40.06■■■■■ 4
LSM7-206ENST00000591515 CUL7Q14999 1698 aa39.96■■■■□ 3.99
LSM7-206ENST00000591515 IGF1RP08069 1367 aa39.89■■■■□ 3.98
LSM7-206ENST00000591515 PPRC1Q5VV67 1664 aaKnown RBP39.83■■■■□ 3.97
LSM7-206ENST00000591515 PTPRGP23470 1445 aa39.8■■■■□ 3.96
LSM7-206ENST00000591515 KIF27Q86VH2 1401 aa39.8■■■■□ 3.96
LSM7-206ENST00000591515 ABCC2Q92887 1545 aa39.76■■■■□ 3.96
LSM7-206ENST00000591515 GLI2P10070 1586 aa39.72■■■■□ 3.95
LSM7-206ENST00000591515 ASXL2Q76L83 1435 aa39.69■■■■□ 3.94
LSM7-206ENST00000591515 TTBK1Q5TCY1 1321 aaPredicted RBP39.68■■■■□ 3.94
LSM7-206ENST00000591515 TNIKQ9UKE5 1360 aa39.68■■■■□ 3.94
LSM7-206ENST00000591515 PLB1Q6P1J6 1458 aa39.65■■■■□ 3.94
LSM7-206ENST00000591515 ILDR1Q86SU0 546 aaPredicted RBP39.65■■■■□ 3.94
LSM7-206ENST00000591515 CARMIL2Q6F5E8 1435 aa39.64■■■■□ 3.94
LSM7-206ENST00000591515 ADGRL1O94910 1474 aa39.62■■■■□ 3.93
LSM7-206ENST00000591515 IQGAP2Q13576 1575 aa39.62■■■■□ 3.93
LSM7-206ENST00000591515 CARMIL1Q5VZK9 1371 aa39.59■■■■□ 3.93
LSM7-206ENST00000591515 UHRF1BP1LA0JNW5 1464 aa39.59■■■■□ 3.93
LSM7-206ENST00000591515 MAP3K4Q9Y6R4 1608 aa39.53■■■■□ 3.92
LSM7-206ENST00000591515 COL17A1Q9UMD9 1497 aaPredicted RBP39.52■■■■□ 3.92
LSM7-206ENST00000591515 UACAQ9BZF9 1416 aa39.5■■■■□ 3.91
LSM7-206ENST00000591515 DISP1Q96F81 1524 aa39.49■■■■□ 3.91
LSM7-206ENST00000591515 EPRSP07814 1512 aaKnown RBP39.46■■■■□ 3.91
LSM7-206ENST00000591515 KDM5BQ9UGL1 1544 aa39.44■■■■□ 3.9
LSM7-206ENST00000591515 ZCCHC11Q5TAX3 1644 aaKnown RBP39.43■■■■□ 3.9
LSM7-206ENST00000591515 HECW2Q9P2P5 1572 aa39.38■■■■□ 3.89
LSM7-206ENST00000591515 TEX14Q8IWB6 1497 aa39.36■■■■□ 3.89
LSM7-206ENST00000591515 UGGT2Q9NYU1 1516 aa39.32■■■■□ 3.89
LSM7-206ENST00000591515 KIAA0556O60303 1618 aa39.29■■■■□ 3.88
LSM7-206ENST00000591515 WDR7Q9Y4E6 1490 aa39.18■■■■□ 3.86
LSM7-206ENST00000591515 RAPGEF2Q9Y4G8 1499 aa39.17■■■■□ 3.86
LSM7-206ENST00000591515 CFAP43Q8NDM7 1665 aa39.1■■■■□ 3.85
LSM7-206ENST00000591515 CTTNBP2Q8WZ74 1663 aa39.06■■■■□ 3.84
LSM7-206ENST00000591515 MAGI3Q5TCQ9 1506 aa39.04■■■■□ 3.84
LSM7-206ENST00000591515 CD109Q6YHK3 1445 aa38.99■■■■□ 3.83
LSM7-206ENST00000591515 ABCA8O94911 1581 aa38.98■■■■□ 3.83
LSM7-206ENST00000591515 KIF21BO75037 1637 aa38.97■■■■□ 3.83
LSM7-206ENST00000591515 KCNH8Q96L42 1107 aa38.87■■■■□ 3.81
LSM7-206ENST00000591515 GOLGA3Q08378 1498 aa38.86■■■■□ 3.81
LSM7-206ENST00000591515 ARAP3Q8WWN8 1544 aa38.76■■■■□ 3.8
LSM7-206ENST00000591515 ADAMTSL3P82987 1691 aa38.68■■■■□ 3.78
LSM7-206ENST00000591515 CHIC1Q5VXU3 224 aa38.68■■■■□ 3.78
LSM7-206ENST00000591515 ABCA9Q8IUA7 1624 aa38.63■■■■□ 3.78
LSM7-206ENST00000591515 FBXO41Q8TF61 875 aa38.62■■■■□ 3.77
LSM7-206ENST00000591515 PTPRMP28827 1452 aa38.6■■■■□ 3.77
LSM7-206ENST00000591515 PRXQ9BXM0 1461 aa38.6■■■■□ 3.77
LSM7-206ENST00000591515 ATP10BO94823 1461 aa38.59■■■■□ 3.77
LSM7-206ENST00000591515 ARID3CA6NKF2 412 aa38.56■■■■□ 3.76
LSM7-206ENST00000591515 BCORL1Q5H9F3 1711 aa38.53■■■■□ 3.76
LSM7-206ENST00000591515 FRMPD1Q5SYB0 1578 aa38.5■■■■□ 3.75
LSM7-206ENST00000591515 PHLDB1Q86UU1 1377 aa38.5■■■■□ 3.75
LSM7-206ENST00000591515 MADDQ8WXG6 1647 aa38.48■■■■□ 3.75
LSM7-206ENST00000591515 RAPGEF3O95398 923 aa38.45■■■■□ 3.75
LSM7-206ENST00000591515 NEO1Q92859 1461 aa38.44■■■■□ 3.74
LSM7-206ENST00000591515 EEA1Q15075 1411 aa38.44■■■■□ 3.74
LSM7-206ENST00000591515 PCF11O94913 1555 aaKnown RBP38.42■■■■□ 3.74
LSM7-206ENST00000591515 P3H3Q8IVL6 736 aa38.42■■■■□ 3.74
LSM7-206ENST00000591515 RAPGEF6Q8TEU7 1601 aa38.41■■■■□ 3.74
LSM7-206ENST00000591515 SAMD9Q5K651 1589 aa38.4■■■■□ 3.74
LSM7-206ENST00000591515 LMTK3Q96Q04 1460 aa38.36■■■■□ 3.73
LSM7-206ENST00000591515 RIMS1Q86UR5 1692 aaKnown RBP38.33■■■■□ 3.73
LSM7-206ENST00000591515 FAM9AQ8IZU1 332 aaPredicted RBP38.33■■■■□ 3.73
LSM7-206ENST00000591515 ARHGEF40Q8TER5 1519 aa38.32■■■■□ 3.72
LSM7-206ENST00000591515 RICTORQ6R327 1708 aa38.29■■■■□ 3.72
LSM7-206ENST00000591515 ARID4BQ4LE39 1312 aaPredicted RBP38.27■■■■□ 3.72
LSM7-206ENST00000591515 CSRNP3Q8WYN3 585 aa38.24■■■■□ 3.71
LSM7-206ENST00000591515 NUP153P49790 1475 aaKnown RBP38.23■■■■□ 3.71
LSM7-206ENST00000591515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.18■■■■□ 3.7
LSM7-206ENST00000591515 HNRNPUL2Q1KMD3 747 aaKnown RBP38.18■■■■□ 3.7
LSM7-206ENST00000591515 SIGLEC1Q9BZZ2 1709 aa38.15■■■■□ 3.7
LSM7-206ENST00000591515 DENND4BO75064 1496 aaPredicted RBP38.15■■■■□ 3.7
LSM7-206ENST00000591515 CFAP74Q9C0B2 1584 aa38.12■■■■□ 3.69
LSM7-206ENST00000591515 FHOD3Q2V2M9 1422 aa38.1■■■■□ 3.69
LSM7-206ENST00000591515 AKNAQ7Z591 1439 aa38.09■■■■□ 3.69
LSM7-206ENST00000591515 ZMYM4Q5VZL5 1548 aa38.07■■■■□ 3.69
LSM7-206ENST00000591515 HSPA2P54652 639 aa38.06■■■■□ 3.68
LSM7-206ENST00000591515 FANCAO15360 1455 aa38.06■■■■□ 3.68
LSM7-206ENST00000591515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.05■■■■□ 3.687e-7■■□□□ 14.3
LSM7-206ENST00000591515 TTC37Q6PGP7 1564 aa38.05■■■■□ 3.68
LSM7-206ENST00000591515 ZFYVE16Q7Z3T8 1539 aa38.02■■■■□ 3.68
LSM7-206ENST00000591515 FER1L4A9Z1Z3 1794 aa38.01■■■■□ 3.67
LSM7-206ENST00000591515 EFCAB5A4FU69 1503 aa38■■■■□ 3.67
LSM7-206ENST00000591515 POGZQ7Z3K3 1410 aa37.99■■■■□ 3.67
LSM7-206ENST00000591515 YEATS2Q9ULM3 1422 aa37.99■■■■□ 3.67
LSM7-206ENST00000591515 PLPPR3Q6T4P5 718 aa37.97■■■■□ 3.67
LSM7-206ENST00000591515 PLEKHD1A6NEE1 506 aa37.96■■■■□ 3.67
LSM7-206ENST00000591515 HECW1Q76N89 1606 aa37.93■■■■□ 3.66
LSM7-206ENST00000591515 RANGAP1P46060 587 aaPredicted RBP37.92■■■■□ 3.66
LSM7-206ENST00000591515 MAGI2Q86UL8 1455 aa37.9■■■■□ 3.66
LSM7-206ENST00000591515 CERKQ8TCT0 537 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms