RNA–Protein interactions for RNA: ENST00000591487.1

LINC01478-202, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 4

Gene LINC01478, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-202ENST00000591487 SMARCA2P51531 1590 aa8.26□□□□□ -1.09
LINC01478-202ENST00000591487 MROH2BQ7Z745 1585 aa8.25□□□□□ -1.09
LINC01478-202ENST00000591487 FXR2P51116 673 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC01478-202ENST00000591487 PKD2Q13563 968 aa8.23□□□□□ -1.09
LINC01478-202ENST00000591487 CHRDL2Q6WN34 429 aa8.23□□□□□ -1.09
LINC01478-202ENST00000591487 ATAD2BQ9ULI0 1458 aa8.23□□□□□ -1.09
LINC01478-202ENST00000591487 PEG3Q9GZU2 1588 aa8.22□□□□□ -1.09
LINC01478-202ENST00000591487 NCAPD3P42695 1498 aa8.21□□□□□ -1.09
LINC01478-202ENST00000591487 NUBP1P53384 320 aa8.21□□□□□ -1.1
LINC01478-202ENST00000591487 WIZO95785 1651 aa8.2□□□□□ -1.1
LINC01478-202ENST00000591487 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
LINC01478-202ENST00000591487 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
LINC01478-202ENST00000591487 HMGXB3Q12766 1538 aa8.19□□□□□ -1.1
LINC01478-202ENST00000591487 CHADLQ6NUI6 762 aa8.17□□□□□ -1.1
LINC01478-202ENST00000591487 NPM1P06748 294 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC01478-202ENST00000591487 PIP4P2Q8N4L2 257 aa8.16□□□□□ -1.1
LINC01478-202ENST00000591487 PRKAR2AP13861 404 aaKnown RBP8.15□□□□□ -1.1
LINC01478-202ENST00000591487 FARP1Q9Y4F1 1045 aaPredicted RBP8.15□□□□□ -1.1
LINC01478-202ENST00000591487 GSE1Q14687 1217 aa8.13□□□□□ -1.11
LINC01478-202ENST00000591487 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
LINC01478-202ENST00000591487 ECM2O94769 699 aaPredicted RBP8.11□□□□□ -1.11
LINC01478-202ENST00000591487 RASEFQ8IZ41 740 aa8.11□□□□□ -1.11
LINC01478-202ENST00000591487 CIZ1Q9ULV3 898 aaPredicted RBP8.11□□□□□ -1.11
LINC01478-202ENST00000591487 TOP2AP11388 1531 aaKnown RBP8.1□□□□□ -1.11
LINC01478-202ENST00000591487 FAM212AQ96EL1 285 aa8.09□□□□□ -1.11
LINC01478-202ENST00000591487 SUPT5HO00267 1087 aaKnown RBP8.08□□□□□ -1.12
LINC01478-202ENST00000591487 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
LINC01478-202ENST00000591487 CHRM1P11229 460 aaPredicted RBP8.05□□□□□ -1.12
LINC01478-202ENST00000591487 RGL2O15211 777 aa8.04□□□□□ -1.12
LINC01478-202ENST00000591487 LAMC3Q9Y6N6 1575 aa8.01□□□□□ -1.13
LINC01478-202ENST00000591487 CCDC88BA6NC98 1476 aa8□□□□□ -1.13
LINC01478-202ENST00000591487 RNF25Q96BH1 459 aaPredicted RBP8□□□□□ -1.13
LINC01478-202ENST00000591487 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
LINC01478-202ENST00000591487 CADPSQ9ULU8 1353 aa7.98□□□□□ -1.13
LINC01478-202ENST00000591487 PRDM2Q13029 1718 aa7.98□□□□□ -1.13
LINC01478-202ENST00000591487 TSPYL2Q9H2G4 693 aaPredicted RBP7.98□□□□□ -1.13
LINC01478-202ENST00000591487 NESP48681 1621 aa7.98□□□□□ -1.13
LINC01478-202ENST00000591487 PDS5BQ9NTI5 1447 aa7.96□□□□□ -1.13
LINC01478-202ENST00000591487 ERCC6Q03468 1493 aa7.96□□□□□ -1.13
LINC01478-202ENST00000591487 PAK3O75914 559 aaPredicted RBP7.96□□□□□ -1.14
LINC01478-202ENST00000591487 PYGBP11216 843 aa7.96□□□□□ -1.14
LINC01478-202ENST00000591487 CFTRP13569 1480 aa7.95□□□□□ -1.14
LINC01478-202ENST00000591487 C19orf67A6NJJ6 358 aa7.95□□□□□ -1.14
LINC01478-202ENST00000591487 RIOK3O14730 519 aaKnown RBP7.95□□□□□ -1.14
LINC01478-202ENST00000591487 KIF21AQ7Z4S6 1674 aa7.94□□□□□ -1.14
LINC01478-202ENST00000591487 CD44P16070 742 aaKnown RBP7.93□□□□□ -1.14
LINC01478-202ENST00000591487 SGIP1Q9BQI5 828 aa7.93□□□□□ -1.14
LINC01478-202ENST00000591487 TAOK2Q9UL54 1235 aa7.93□□□□□ -1.14
LINC01478-202ENST00000591487 VGFO15240 615 aaPredicted RBP7.91□□□□□ -1.14
LINC01478-202ENST00000591487 DNAJC5Q9H3Z4 198 aa7.91□□□□□ -1.14
LINC01478-202ENST00000591487 FANCD2Q9BXW9 1451 aa7.9□□□□□ -1.14
LINC01478-202ENST00000591487 ZNF467Q7Z7K2 595 aaPredicted RBP7.9□□□□□ -1.14
LINC01478-202ENST00000591487 HS6ST3Q8IZP7 471 aa7.9□□□□□ -1.14
LINC01478-202ENST00000591487 BBXQ8WY36 941 aaPredicted RBP7.89□□□□□ -1.15
LINC01478-202ENST00000591487 KIF12Q96FN5 646 aa7.89□□□□□ -1.15
LINC01478-202ENST00000591487 ZRANB1Q9UGI0 708 aa7.89□□□□□ -1.15
LINC01478-202ENST00000591487 CEP164Q9UPV0 1460 aa7.88□□□□□ -1.15
LINC01478-202ENST00000591487 ZNF579Q8NAF0 562 aaKnown RBP7.88□□□□□ -1.15
LINC01478-202ENST00000591487 CHGAP10645 457 aaKnown RBP7.87□□□□□ -1.15
LINC01478-202ENST00000591487 MAP3K13O43283 966 aa7.86□□□□□ -1.15
LINC01478-202ENST00000591487 THOC2Q8NI27 1593 aaKnown RBP7.85□□□□□ -1.15
LINC01478-202ENST00000591487 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
LINC01478-202ENST00000591487 PLCB2Q00722 1185 aa7.85□□□□□ -1.15
LINC01478-202ENST00000591487 MRC2Q9UBG0 1479 aa7.85□□□□□ -1.15
LINC01478-202ENST00000591487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.84□□□□□ -1.15
LINC01478-202ENST00000591487 ZFP91Q96JP5 570 aaPredicted RBP7.84□□□□□ -1.15
LINC01478-202ENST00000591487 PCDHB13Q9Y5F0 798 aa7.84□□□□□ -1.15
LINC01478-202ENST00000591487 CUX2O14529 1486 aa7.83□□□□□ -1.16
LINC01478-202ENST00000591487 IFNL1Q8IU54 200 aa7.83□□□□□ -1.16
LINC01478-202ENST00000591487 PHF12Q96QT6 1004 aa7.83□□□□□ -1.16
LINC01478-202ENST00000591487 PCDHB8Q9UN66 801 aa7.83□□□□□ -1.16
LINC01478-202ENST00000591487 ABCC8Q09428 1581 aa7.83□□□□□ -1.16
LINC01478-202ENST00000591487 PDAP1Q13442 181 aaKnown RBP7.82□□□□□ -1.16
LINC01478-202ENST00000591487 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.82□□□□□ -1.16
LINC01478-202ENST00000591487 WDR62O43379 1518 aa7.82□□□□□ -1.16
LINC01478-202ENST00000591487 HAX1O00165 279 aa7.81□□□□□ -1.16
LINC01478-202ENST00000591487 STK25O00506 426 aa7.81□□□□□ -1.16
LINC01478-202ENST00000591487 POTEHQ6S545 545 aa7.81□□□□□ -1.16
LINC01478-202ENST00000591487 CLCN6P51797 869 aa7.8□□□□□ -1.16
LINC01478-202ENST00000591487 EVX2Q03828 476 aa7.8□□□□□ -1.16
LINC01478-202ENST00000591487 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
LINC01478-202ENST00000591487 URB2Q14146 1524 aaKnown RBP7.79□□□□□ -1.16
LINC01478-202ENST00000591487 PSEN1P49768 467 aa7.79□□□□□ -1.16
LINC01478-202ENST00000591487 DNMBPQ6XZF7 1577 aa7.79□□□□□ -1.16
LINC01478-202ENST00000591487 NKX1-1Q15270 411 aaPredicted RBP7.78□□□□□ -1.16
LINC01478-202ENST00000591487 TOPBP1Q92547 1522 aa7.78□□□□□ -1.16
LINC01478-202ENST00000591487 MS4A3Q96HJ5 214 aa7.77□□□□□ -1.17
LINC01478-202ENST00000591487 STK24Q9Y6E0 443 aa7.77□□□□□ -1.17
LINC01478-202ENST00000591487 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
LINC01478-202ENST00000591487 PAXIP1Q6ZW49 1069 aaPredicted RBP7.75□□□□□ -1.17
LINC01478-202ENST00000591487 CUX1P39880 1505 aa7.73□□□□□ -1.17
LINC01478-202ENST00000591487 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
LINC01478-202ENST00000591487 BIVM-ERCC5R4GMW8 1640 aa7.73□□□□□ -1.17
LINC01478-202ENST00000591487 TOP2BQ02880 1626 aa7.72□□□□□ -1.17
LINC01478-202ENST00000591487 GTPBP6O43824 516 aaPredicted RBP7.72□□□□□ -1.17
LINC01478-202ENST00000591487 TIE1P35590 1138 aa7.72□□□□□ -1.17
LINC01478-202ENST00000591487 TRPC6Q9Y210 931 aa7.72□□□□□ -1.17
LINC01478-202ENST00000591487 IFT140Q96RY7 1462 aa7.72□□□□□ -1.17
LINC01478-202ENST00000591487 GALR2O43603 387 aaPredicted RBP7.71□□□□□ -1.18
LINC01478-202ENST00000591487 CFAP44Q96MT7 982 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms