RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 ILDR1Q86SU0 546 aaPredicted RBP35.53■■■■□ 3.28
PCSK4-211ENST00000591303 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
PCSK4-211ENST00000591303 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
PCSK4-211ENST00000591303 JPH4Q96JJ6 628 aa35.49■■■■□ 3.27
PCSK4-211ENST00000591303 KDM6BO15054 1643 aa35.47■■■■□ 3.27
PCSK4-211ENST00000591303 TOP2BQ02880 1626 aa35.46■■■■□ 3.27
PCSK4-211ENST00000591303 ADCY10Q96PN6 1610 aa35.46■■■■□ 3.27
PCSK4-211ENST00000591303 RUSC2Q8N2Y8 1516 aa35.42■■■■□ 3.26
PCSK4-211ENST00000591303 TSPOAP1O95153 1857 aa35.37■■■■□ 3.25
PCSK4-211ENST00000591303 NPM1P06748 294 aaKnown RBP eCLIP35.34■■■■□ 3.25
PCSK4-211ENST00000591303 PPRC1Q5VV67 1664 aaKnown RBP35.08■■■■□ 3.21
PCSK4-211ENST00000591303 ADGRL1O94910 1474 aa35.06■■■■□ 3.2
PCSK4-211ENST00000591303 KIAA0586Q9BVV6 1533 aa35.06■■■■□ 3.2
PCSK4-211ENST00000591303 SUPT5HO00267 1087 aaKnown RBP34.94■■■■□ 3.18
PCSK4-211ENST00000591303 HECW2Q9P2P5 1572 aa34.94■■■■□ 3.18
PCSK4-211ENST00000591303 GLI2P10070 1586 aa34.92■■■■□ 3.18
PCSK4-211ENST00000591303 COL17A1Q9UMD9 1497 aaPredicted RBP34.9■■■■□ 3.18
PCSK4-211ENST00000591303 PTPRGP23470 1445 aa34.89■■■■□ 3.18
PCSK4-211ENST00000591303 ABCC2Q92887 1545 aa34.89■■■■□ 3.18
PCSK4-211ENST00000591303 ASXL2Q76L83 1435 aa34.89■■■■□ 3.18
PCSK4-211ENST00000591303 IGF1RP08069 1367 aa34.85■■■■□ 3.17
PCSK4-211ENST00000591303 CUL7Q14999 1698 aa34.82■■■■□ 3.17
PCSK4-211ENST00000591303 PLB1Q6P1J6 1458 aa34.82■■■■□ 3.16
PCSK4-211ENST00000591303 TTBK1Q5TCY1 1321 aaPredicted RBP34.8■■■■□ 3.16
PCSK4-211ENST00000591303 TNIKQ9UKE5 1360 aa34.74■■■■□ 3.15
PCSK4-211ENST00000591303 MAP3K4Q9Y6R4 1608 aa34.74■■■■□ 3.15
PCSK4-211ENST00000591303 UHRF1BP1LA0JNW5 1464 aa34.71■■■■□ 3.15
PCSK4-211ENST00000591303 EPRSP07814 1512 aaKnown RBP34.68■■■■□ 3.14
PCSK4-211ENST00000591303 CARMIL2Q6F5E8 1435 aa34.65■■■■□ 3.14
PCSK4-211ENST00000591303 KIF27Q86VH2 1401 aa34.65■■■■□ 3.14
PCSK4-211ENST00000591303 UACAQ9BZF9 1416 aa34.62■■■■□ 3.13
PCSK4-211ENST00000591303 KDM5BQ9UGL1 1544 aa34.6■■■■□ 3.13
PCSK4-211ENST00000591303 IQGAP2Q13576 1575 aa34.59■■■■□ 3.13
PCSK4-211ENST00000591303 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
PCSK4-211ENST00000591303 DISP1Q96F81 1524 aa34.56■■■■□ 3.12
PCSK4-211ENST00000591303 ZCCHC11Q5TAX3 1644 aaKnown RBP34.55■■■■□ 3.12
PCSK4-211ENST00000591303 CARMIL1Q5VZK9 1371 aa34.54■■■■□ 3.12
PCSK4-211ENST00000591303 FBXO41Q8TF61 875 aa34.4■■■■□ 3.1
PCSK4-211ENST00000591303 WDR7Q9Y4E6 1490 aa34.36■■■■□ 3.09
PCSK4-211ENST00000591303 UGGT2Q9NYU1 1516 aa34.35■■■■□ 3.09
PCSK4-211ENST00000591303 KIAA0556O60303 1618 aa34.33■■■■□ 3.09
PCSK4-211ENST00000591303 KIF21BO75037 1637 aa34.33■■■■□ 3.09
PCSK4-211ENST00000591303 MAGI3Q5TCQ9 1506 aa34.3■■■■□ 3.08
PCSK4-211ENST00000591303 CFAP43Q8NDM7 1665 aa34.28■■■■□ 3.08
PCSK4-211ENST00000591303 CD109Q6YHK3 1445 aa34.24■■■■□ 3.07
PCSK4-211ENST00000591303 RAPGEF2Q9Y4G8 1499 aa34.12■■■■□ 3.05
PCSK4-211ENST00000591303 KCNH8Q96L42 1107 aa34.11■■■■□ 3.05
PCSK4-211ENST00000591303 ADAMTSL3P82987 1691 aa34.11■■■■□ 3.05
PCSK4-211ENST00000591303 PTPRMP28827 1452 aa34.09■■■■□ 3.05
PCSK4-211ENST00000591303 ABCA8O94911 1581 aa34.09■■■■□ 3.05
PCSK4-211ENST00000591303 ARAP3Q8WWN8 1544 aa34.06■■■■□ 3.04
PCSK4-211ENST00000591303 CTTNBP2Q8WZ74 1663 aa33.99■■■■□ 3.03
PCSK4-211ENST00000591303 PCF11O94913 1555 aaKnown RBP33.94■■■■□ 3.02
PCSK4-211ENST00000591303 LMTK3Q96Q04 1460 aa33.93■■■■□ 3.02
PCSK4-211ENST00000591303 BCORL1Q5H9F3 1711 aa33.91■■■■□ 3.02
PCSK4-211ENST00000591303 MADDQ8WXG6 1647 aa33.9■■■■□ 3.02
PCSK4-211ENST00000591303 GOLGA3Q08378 1498 aa33.88■■■■□ 3.01
PCSK4-211ENST00000591303 ABCA9Q8IUA7 1624 aa33.84■■■■□ 3.01
PCSK4-211ENST00000591303 FRMPD1Q5SYB0 1578 aa33.82■■■■□ 3
PCSK4-211ENST00000591303 RAPGEF3O95398 923 aa33.82■■■■□ 3
PCSK4-211ENST00000591303 ATP10BO94823 1461 aa33.78■■■■□ 3
PCSK4-211ENST00000591303 PHLDB1Q86UU1 1377 aa33.76■■■■□ 3
PCSK4-211ENST00000591303 ARID3CA6NKF2 412 aa33.76■■■□□ 2.99
PCSK4-211ENST00000591303 RIMS1Q86UR5 1692 aaKnown RBP33.74■■■□□ 2.99
PCSK4-211ENST00000591303 NEO1Q92859 1461 aa33.7■■■□□ 2.99
PCSK4-211ENST00000591303 HSPA2P54652 639 aa33.67■■■□□ 2.98
PCSK4-211ENST00000591303 ARID4BQ4LE39 1312 aaPredicted RBP33.66■■■□□ 2.98
PCSK4-211ENST00000591303 ARHGEF40Q8TER5 1519 aa33.63■■■□□ 2.97
PCSK4-211ENST00000591303 CERKQ8TCT0 537 aa33.59■■■□□ 2.97
PCSK4-211ENST00000591303 SIGLEC1Q9BZZ2 1709 aa33.58■■■□□ 2.97
PCSK4-211ENST00000591303 RICTORQ6R327 1708 aa33.57■■■□□ 2.96
PCSK4-211ENST00000591303 PRXQ9BXM0 1461 aa33.56■■■□□ 2.96
PCSK4-211ENST00000591303 ILDR2Q71H61 639 aa33.56■■■□□ 2.96
PCSK4-211ENST00000591303 P3H3Q8IVL6 736 aa33.55■■■□□ 2.96
PCSK4-211ENST00000591303 RAPGEF6Q8TEU7 1601 aa33.5■■■□□ 2.95
PCSK4-211ENST00000591303 PLPPR3Q6T4P5 718 aa33.46■■■□□ 2.95
PCSK4-211ENST00000591303 DENND4BO75064 1496 aaPredicted RBP33.45■■■□□ 2.95
PCSK4-211ENST00000591303 SAMD9Q5K651 1589 aa33.45■■■□□ 2.95
PCSK4-211ENST00000591303 FHOD3Q2V2M9 1422 aa33.43■■■□□ 2.94
PCSK4-211ENST00000591303 SOCS7O14512 581 aa33.41■■■□□ 2.94
PCSK4-211ENST00000591303 DISP3Q9P2K9 1392 aa33.41■■■□□ 2.94
PCSK4-211ENST00000591303 ZMYM4Q5VZL5 1548 aa33.39■■■□□ 2.94
PCSK4-211ENST00000591303 FANCAO15360 1455 aa33.39■■■□□ 2.94
PCSK4-211ENST00000591303 NUP153P49790 1475 aaKnown RBP33.39■■■□□ 2.94
PCSK4-211ENST00000591303 AKNAQ7Z591 1439 aa33.38■■■□□ 2.93
PCSK4-211ENST00000591303 YEATS2Q9ULM3 1422 aa33.38■■■□□ 2.93
PCSK4-211ENST00000591303 FER1L4A9Z1Z3 1794 aa33.37■■■□□ 2.93
PCSK4-211ENST00000591303 TTC37Q6PGP7 1564 aa33.36■■■□□ 2.93
PCSK4-211ENST00000591303 FAM9AQ8IZU1 332 aaPredicted RBP33.35■■■□□ 2.93
PCSK4-211ENST00000591303 POGZQ7Z3K3 1410 aa33.35■■■□□ 2.93
PCSK4-211ENST00000591303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.34■■■□□ 2.93
PCSK4-211ENST00000591303 HNRNPUL2Q1KMD3 747 aaKnown RBP33.34■■■□□ 2.93
PCSK4-211ENST00000591303 ZFYVE16Q7Z3T8 1539 aa33.33■■■□□ 2.93
PCSK4-211ENST00000591303 CFAP74Q9C0B2 1584 aa33.31■■■□□ 2.92
PCSK4-211ENST00000591303 EFCAB5A4FU69 1503 aa33.3■■■□□ 2.92
PCSK4-211ENST00000591303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.29■■■□□ 2.92
PCSK4-211ENST00000591303 STRCQ7RTU9 1775 aa33.27■■■□□ 2.92
PCSK4-211ENST00000591303 PREX1Q8TCU6 1659 aa33.26■■■□□ 2.92
PCSK4-211ENST00000591303 MLECQ14165 292 aa33.26■■■□□ 2.91
PCSK4-211ENST00000591303 HECW1Q76N89 1606 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms