RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 CTTNBP2Q8WZ74 1663 aa25.59■■□□□ 1.69
LSM12-204ENST00000591247 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
LSM12-204ENST00000591247 RRBP1Q9P2E9 1410 aaKnown RBP25.56■■□□□ 1.68
LSM12-204ENST00000591247 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
LSM12-204ENST00000591247 FHOD3Q2V2M9 1422 aa25.54■■□□□ 1.68
LSM12-204ENST00000591247 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
LSM12-204ENST00000591247 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
LSM12-204ENST00000591247 EFCAB5A4FU69 1503 aa25.52■■□□□ 1.68
LSM12-204ENST00000591247 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
LSM12-204ENST00000591247 LRRC9Q6ZRR7 1453 aa25.46■■□□□ 1.67
LSM12-204ENST00000591247 CCNB3Q8WWL7 1395 aa25.45■■□□□ 1.66
LSM12-204ENST00000591247 CFAP43Q8NDM7 1665 aa25.43■■□□□ 1.66
LSM12-204ENST00000591247 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.663e-7■■■■□ 24
LSM12-204ENST00000591247 PBRM1Q86U86 1689 aa25.41■■□□□ 1.66
LSM12-204ENST00000591247 FYCO1Q9BQS8 1478 aa25.4■■□□□ 1.66
LSM12-204ENST00000591247 CASKIN1Q8WXD9 1431 aa25.4■■□□□ 1.66
LSM12-204ENST00000591247 ATP1B4Q9UN42 357 aaPredicted RBP25.39■■□□□ 1.66
LSM12-204ENST00000591247 SAMD9Q5K651 1589 aa25.38■■□□□ 1.65
LSM12-204ENST00000591247 WDR62O43379 1518 aa25.36■■□□□ 1.65
LSM12-204ENST00000591247 PHLDB1Q86UU1 1377 aa25.35■■□□□ 1.65
LSM12-204ENST00000591247 FMN1Q68DA7 1419 aa25.34■■□□□ 1.65
LSM12-204ENST00000591247 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
LSM12-204ENST00000591247 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
LSM12-204ENST00000591247 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
LSM12-204ENST00000591247 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
LSM12-204ENST00000591247 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
LSM12-204ENST00000591247 ITGAEP38570 1179 aa25.29■■□□□ 1.64
LSM12-204ENST00000591247 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
LSM12-204ENST00000591247 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
LSM12-204ENST00000591247 LRRIQ1Q96JM4 1722 aa25.21■■□□□ 1.63
LSM12-204ENST00000591247 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
LSM12-204ENST00000591247 CLSPNQ9HAW4 1339 aa25.19■■□□□ 1.62
LSM12-204ENST00000591247 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
LSM12-204ENST00000591247 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
LSM12-204ENST00000591247 FAM50AQ14320 339 aaKnown RBP25.15■■□□□ 1.62
LSM12-204ENST00000591247 ZNF316A6NFI3 1004 aaPredicted RBP25.14■■□□□ 1.62
LSM12-204ENST00000591247 DIEXFQ68CQ4 756 aaKnown RBP25.14■■□□□ 1.62
LSM12-204ENST00000591247 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
LSM12-204ENST00000591247 RAB3GAP2Q9H2M9 1393 aa25.12■■□□□ 1.61
LSM12-204ENST00000591247 MTUS2Q5JR59 1369 aa25.1■■□□□ 1.61
LSM12-204ENST00000591247 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
LSM12-204ENST00000591247 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
LSM12-204ENST00000591247 UGGT2Q9NYU1 1516 aa25.05■■□□□ 1.6
LSM12-204ENST00000591247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
LSM12-204ENST00000591247 FGD6Q6ZV73 1430 aa25.04■■□□□ 1.6
LSM12-204ENST00000591247 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
LSM12-204ENST00000591247 KIAA0586Q9BVV6 1533 aa25.02■■□□□ 1.6
LSM12-204ENST00000591247 NCOA2Q15596 1464 aa25.01■■□□□ 1.59
LSM12-204ENST00000591247 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
LSM12-204ENST00000591247 EHBP1L1Q8N3D4 1523 aa25■■□□□ 1.59
LSM12-204ENST00000591247 HECW1Q76N89 1606 aa24.99■■□□□ 1.59
LSM12-204ENST00000591247 CCDC18Q5T9S5 1454 aa24.99■■□□□ 1.59
LSM12-204ENST00000591247 SUPT6HQ7KZ85 1726 aaKnown RBP24.97■■□□□ 1.59
LSM12-204ENST00000591247 MAPKBP1O60336 1514 aa24.97■■□□□ 1.59
LSM12-204ENST00000591247 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
LSM12-204ENST00000591247 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
LSM12-204ENST00000591247 MYT1Q01538 1121 aa24.96■■□□□ 1.59
LSM12-204ENST00000591247 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.59
LSM12-204ENST00000591247 EPRSP07814 1512 aaKnown RBP24.95■■□□□ 1.58
LSM12-204ENST00000591247 MYOM3Q5VTT5 1437 aa24.95■■□□□ 1.58
LSM12-204ENST00000591247 KIAA0556O60303 1618 aa24.93■■□□□ 1.58
LSM12-204ENST00000591247 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
LSM12-204ENST00000591247 GTF3C3Q9Y5Q9 886 aa24.93■■□□□ 1.58
LSM12-204ENST00000591247 CDK13Q14004 1512 aaKnown RBP24.91■■□□□ 1.58
LSM12-204ENST00000591247 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
LSM12-204ENST00000591247 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
LSM12-204ENST00000591247 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
LSM12-204ENST00000591247 CEP170Q5SW79 1584 aa24.89■■□□□ 1.57
LSM12-204ENST00000591247 ARID3CA6NKF2 412 aa24.87■■□□□ 1.57
LSM12-204ENST00000591247 PTPN23Q9H3S7 1636 aa24.84■■□□□ 1.57
LSM12-204ENST00000591247 FBLN2P98095 1184 aa24.84■■□□□ 1.57
LSM12-204ENST00000591247 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
LSM12-204ENST00000591247 HFM1A2PYH4 1435 aa24.78■■□□□ 1.56
LSM12-204ENST00000591247 NUP160Q12769 1436 aa24.78■■□□□ 1.56
LSM12-204ENST00000591247 RAPGEF6Q8TEU7 1601 aa24.77■■□□□ 1.56
LSM12-204ENST00000591247 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
LSM12-204ENST00000591247 SIN3AQ96ST3 1273 aa24.75■■□□□ 1.55
LSM12-204ENST00000591247 NAIPQ13075 1403 aa24.73■■□□□ 1.55
LSM12-204ENST00000591247 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
LSM12-204ENST00000591247 MIA2Q96PC5 1412 aa24.7■■□□□ 1.54
LSM12-204ENST00000591247 MIER1Q8N108 512 aa24.69■■□□□ 1.54
LSM12-204ENST00000591247 PLB1Q6P1J6 1458 aa24.68■■□□□ 1.54
LSM12-204ENST00000591247 CARMIL2Q6F5E8 1435 aa24.65■■□□□ 1.54
LSM12-204ENST00000591247 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
LSM12-204ENST00000591247 CHIC2Q9UKJ5 165 aa24.63■■□□□ 1.53
LSM12-204ENST00000591247 RRP7BPQ9NSQ0 103 aa24.62■■□□□ 1.53
LSM12-204ENST00000591247 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
LSM12-204ENST00000591247 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
LSM12-204ENST00000591247 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
LSM12-204ENST00000591247 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
LSM12-204ENST00000591247 TROQ12816 1431 aaPredicted RBP24.57■■□□□ 1.52
LSM12-204ENST00000591247 AKNAQ7Z591 1439 aa24.56■■□□□ 1.52
LSM12-204ENST00000591247 KDM6BO15054 1643 aa24.54■■□□□ 1.52
LSM12-204ENST00000591247 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
LSM12-204ENST00000591247 ABCA8O94911 1581 aa24.52■■□□□ 1.52
LSM12-204ENST00000591247 DAPK1P53355 1430 aa24.51■■□□□ 1.51
LSM12-204ENST00000591247 KIF14Q15058 1648 aa24.5■■□□□ 1.51
LSM12-204ENST00000591247 ABCC5O15440 1437 aa24.49■■□□□ 1.51
LSM12-204ENST00000591247 PPP1R15AO75807 674 aaPredicted RBP24.49■■□□□ 1.51
LSM12-204ENST00000591247 DNMT1P26358 1616 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms