RNA–Protein interactions for RNA: ENST00000590719.1

LINC01533-204, Transcript of long intergenic non-protein coding RNA 1533, humanhuman

TSL 5 BASIC

Gene LINC01533, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01533-204ENST00000590719 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
LINC01533-204ENST00000590719 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
LINC01533-204ENST00000590719 BAZ1AQ9NRL2 1556 aaPredicted RBP11.72□□□□□ -0.53
LINC01533-204ENST00000590719 SMARCA2P51531 1590 aa11.71□□□□□ -0.53
LINC01533-204ENST00000590719 MROH2BQ7Z745 1585 aa11.68□□□□□ -0.54
LINC01533-204ENST00000590719 BAZ1BQ9UIG0 1483 aaKnown RBP11.68□□□□□ -0.54
LINC01533-204ENST00000590719 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
LINC01533-204ENST00000590719 HMGXB3Q12766 1538 aa11.65□□□□□ -0.54
LINC01533-204ENST00000590719 NUBP1P53384 320 aa11.65□□□□□ -0.54
LINC01533-204ENST00000590719 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
LINC01533-204ENST00000590719 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
LINC01533-204ENST00000590719 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
LINC01533-204ENST00000590719 HAX1O00165 279 aa11.62□□□□□ -0.55
LINC01533-204ENST00000590719 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
LINC01533-204ENST00000590719 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
LINC01533-204ENST00000590719 EVX2Q03828 476 aa11.59□□□□□ -0.55
LINC01533-204ENST00000590719 NESP48681 1621 aa11.59□□□□□ -0.55
LINC01533-204ENST00000590719 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
LINC01533-204ENST00000590719 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
LINC01533-204ENST00000590719 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
LINC01533-204ENST00000590719 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
LINC01533-204ENST00000590719 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC01533-204ENST00000590719 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
LINC01533-204ENST00000590719 CUX2O14529 1486 aa11.51□□□□□ -0.57
LINC01533-204ENST00000590719 CD44P16070 742 aaKnown RBP11.5□□□□□ -0.57
LINC01533-204ENST00000590719 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
LINC01533-204ENST00000590719 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
LINC01533-204ENST00000590719 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
LINC01533-204ENST00000590719 WIZO95785 1651 aa11.49□□□□□ -0.57
LINC01533-204ENST00000590719 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
LINC01533-204ENST00000590719 PKD2Q13563 968 aa11.46□□□□□ -0.57
LINC01533-204ENST00000590719 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
LINC01533-204ENST00000590719 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
LINC01533-204ENST00000590719 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
LINC01533-204ENST00000590719 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
LINC01533-204ENST00000590719 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
LINC01533-204ENST00000590719 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
LINC01533-204ENST00000590719 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
LINC01533-204ENST00000590719 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
LINC01533-204ENST00000590719 PYGBP11216 843 aa11.36□□□□□ -0.59
LINC01533-204ENST00000590719 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
LINC01533-204ENST00000590719 CFTRP13569 1480 aa11.36□□□□□ -0.59
LINC01533-204ENST00000590719 GSE1Q14687 1217 aa11.34□□□□□ -0.59
LINC01533-204ENST00000590719 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
LINC01533-204ENST00000590719 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
LINC01533-204ENST00000590719 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
LINC01533-204ENST00000590719 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
LINC01533-204ENST00000590719 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
LINC01533-204ENST00000590719 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
LINC01533-204ENST00000590719 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
LINC01533-204ENST00000590719 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
LINC01533-204ENST00000590719 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
LINC01533-204ENST00000590719 MAP3K13O43283 966 aa11.3□□□□□ -0.6
LINC01533-204ENST00000590719 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
LINC01533-204ENST00000590719 RGL2O15211 777 aa11.28□□□□□ -0.6
LINC01533-204ENST00000590719 ECM2O94769 699 aaPredicted RBP11.28□□□□□ -0.6
LINC01533-204ENST00000590719 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
LINC01533-204ENST00000590719 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
LINC01533-204ENST00000590719 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
LINC01533-204ENST00000590719 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
LINC01533-204ENST00000590719 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
LINC01533-204ENST00000590719 WDR62O43379 1518 aa11.25□□□□□ -0.61
LINC01533-204ENST00000590719 GABBR2O75899 941 aa11.23□□□□□ -0.61
LINC01533-204ENST00000590719 IFNL1Q8IU54 200 aa11.23□□□□□ -0.61
LINC01533-204ENST00000590719 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
LINC01533-204ENST00000590719 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
LINC01533-204ENST00000590719 URB2Q14146 1524 aaKnown RBP11.21□□□□□ -0.61
LINC01533-204ENST00000590719 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
LINC01533-204ENST00000590719 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
LINC01533-204ENST00000590719 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
LINC01533-204ENST00000590719 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
LINC01533-204ENST00000590719 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
LINC01533-204ENST00000590719 TOPBP1Q92547 1522 aa11.1□□□□□ -0.63
LINC01533-204ENST00000590719 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
LINC01533-204ENST00000590719 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
LINC01533-204ENST00000590719 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
LINC01533-204ENST00000590719 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
LINC01533-204ENST00000590719 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
LINC01533-204ENST00000590719 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
LINC01533-204ENST00000590719 PSEN1P49768 467 aa11.05□□□□□ -0.64
LINC01533-204ENST00000590719 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
LINC01533-204ENST00000590719 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01533-204ENST00000590719 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
LINC01533-204ENST00000590719 SOGA1O94964 1423 aa11.03□□□□□ -0.64
LINC01533-204ENST00000590719 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
LINC01533-204ENST00000590719 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
LINC01533-204ENST00000590719 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
LINC01533-204ENST00000590719 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
LINC01533-204ENST00000590719 ATN1P54259 1190 aaPredicted RBP11.02□□□□□ -0.65
LINC01533-204ENST00000590719 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.65
LINC01533-204ENST00000590719 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
LINC01533-204ENST00000590719 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
LINC01533-204ENST00000590719 TIE1P35590 1138 aa11.01□□□□□ -0.65
LINC01533-204ENST00000590719 CLCN6P51797 869 aa11.01□□□□□ -0.65
LINC01533-204ENST00000590719 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
LINC01533-204ENST00000590719 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
LINC01533-204ENST00000590719 PRDM2Q13029 1718 aa10.98□□□□□ -0.65
LINC01533-204ENST00000590719 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
LINC01533-204ENST00000590719 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
LINC01533-204ENST00000590719 FGD5Q6ZNL6 1462 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms