RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
GCDH-213ENST00000590627 IGF1RP08069 1367 aa27.87■■■□□ 2.05
GCDH-213ENST00000590627 CUL7Q14999 1698 aa27.87■■■□□ 2.05
GCDH-213ENST00000590627 KIAA0586Q9BVV6 1533 aa27.84■■■□□ 2.05
GCDH-213ENST00000590627 KIF13AQ9H1H9 1805 aa27.81■■■□□ 2.04
GCDH-213ENST00000590627 NPM1P06748 294 aaKnown RBP eCLIP27.73■■■□□ 2.03
GCDH-213ENST00000590627 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
GCDH-213ENST00000590627 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
GCDH-213ENST00000590627 ADCY10Q96PN6 1610 aa27.7■■■□□ 2.02
GCDH-213ENST00000590627 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
GCDH-213ENST00000590627 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
GCDH-213ENST00000590627 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
GCDH-213ENST00000590627 DIP2BQ9P265 1576 aa27.61■■■□□ 2.01
GCDH-213ENST00000590627 PTPRGP23470 1445 aa27.57■■■□□ 2
GCDH-213ENST00000590627 CARMIL2Q6F5E8 1435 aa27.57■■■□□ 2
GCDH-213ENST00000590627 IQGAP2Q13576 1575 aa27.55■■■□□ 2
GCDH-213ENST00000590627 TNIKQ9UKE5 1360 aa27.52■■■□□ 2
GCDH-213ENST00000590627 EEA1Q15075 1411 aa27.49■■□□□ 1.99
GCDH-213ENST00000590627 ABCC2Q92887 1545 aa27.46■■□□□ 1.99
GCDH-213ENST00000590627 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
GCDH-213ENST00000590627 DISP1Q96F81 1524 aa27.41■■□□□ 1.98
GCDH-213ENST00000590627 UHRF1BP1LA0JNW5 1464 aa27.41■■□□□ 1.98
GCDH-213ENST00000590627 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
GCDH-213ENST00000590627 KDM6BO15054 1643 aa27.39■■□□□ 1.98
GCDH-213ENST00000590627 UGGT2Q9NYU1 1516 aa27.38■■□□□ 1.97
GCDH-213ENST00000590627 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
GCDH-213ENST00000590627 UACAQ9BZF9 1416 aa27.36■■□□□ 1.97
GCDH-213ENST00000590627 PLB1Q6P1J6 1458 aa27.36■■□□□ 1.97
GCDH-213ENST00000590627 ASXL2Q76L83 1435 aa27.34■■□□□ 1.97
GCDH-213ENST00000590627 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
GCDH-213ENST00000590627 GLI2P10070 1586 aa27.32■■□□□ 1.96
GCDH-213ENST00000590627 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
GCDH-213ENST00000590627 KIAA0556O60303 1618 aa27.29■■□□□ 1.96
GCDH-213ENST00000590627 KDM5BQ9UGL1 1544 aa27.28■■□□□ 1.96
GCDH-213ENST00000590627 CTTNBP2Q8WZ74 1663 aa27.24■■□□□ 1.95
GCDH-213ENST00000590627 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
GCDH-213ENST00000590627 ZCCHC11Q5TAX3 1644 aaKnown RBP27.19■■□□□ 1.94
GCDH-213ENST00000590627 PRXQ9BXM0 1461 aa27.19■■□□□ 1.94
GCDH-213ENST00000590627 EPRSP07814 1512 aaKnown RBP27.18■■□□□ 1.94
GCDH-213ENST00000590627 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
GCDH-213ENST00000590627 MAP3K4Q9Y6R4 1608 aa27.15■■□□□ 1.94
GCDH-213ENST00000590627 KDM4FA0A1W2PPD8 638 aa27.11■■□□□ 1.93
GCDH-213ENST00000590627 KIF21BO75037 1637 aa27.1■■□□□ 1.93
GCDH-213ENST00000590627 TEX14Q8IWB6 1497 aa27.09■■□□□ 1.93
GCDH-213ENST00000590627 WDR7Q9Y4E6 1490 aa27.08■■□□□ 1.93
GCDH-213ENST00000590627 ABCA8O94911 1581 aa27.05■■□□□ 1.92
GCDH-213ENST00000590627 COL17A1Q9UMD9 1497 aaPredicted RBP27.02■■□□□ 1.92
GCDH-213ENST00000590627 CFAP43Q8NDM7 1665 aa26.95■■□□□ 1.91
GCDH-213ENST00000590627 MAGI3Q5TCQ9 1506 aa26.93■■□□□ 1.9
GCDH-213ENST00000590627 CD109Q6YHK3 1445 aa26.91■■□□□ 1.9
GCDH-213ENST00000590627 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
GCDH-213ENST00000590627 ADGRL1O94910 1474 aa26.89■■□□□ 1.9
GCDH-213ENST00000590627 KCNH8Q96L42 1107 aa26.88■■□□□ 1.89
GCDH-213ENST00000590627 UBTFP17480 764 aaKnown RBP26.85■■□□□ 1.89
GCDH-213ENST00000590627 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
GCDH-213ENST00000590627 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
GCDH-213ENST00000590627 ATP10BO94823 1461 aa26.81■■□□□ 1.88
GCDH-213ENST00000590627 P3H3Q8IVL6 736 aa26.81■■□□□ 1.88
GCDH-213ENST00000590627 RAPGEF6Q8TEU7 1601 aa26.75■■□□□ 1.87
GCDH-213ENST00000590627 ARID3CA6NKF2 412 aa26.73■■□□□ 1.87
GCDH-213ENST00000590627 ARAP3Q8WWN8 1544 aa26.73■■□□□ 1.87
GCDH-213ENST00000590627 ABCA9Q8IUA7 1624 aa26.72■■□□□ 1.87
GCDH-213ENST00000590627 PHLDB1Q86UU1 1377 aa26.69■■□□□ 1.86
GCDH-213ENST00000590627 NUP153P49790 1475 aaKnown RBP26.64■■□□□ 1.86
GCDH-213ENST00000590627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
GCDH-213ENST00000590627 HNRNPUL2Q1KMD3 747 aaKnown RBP26.61■■□□□ 1.85
GCDH-213ENST00000590627 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
GCDH-213ENST00000590627 NEO1Q92859 1461 aa26.61■■□□□ 1.85
GCDH-213ENST00000590627 CEP162Q5TB80 1403 aa26.58■■□□□ 1.85
GCDH-213ENST00000590627 EFCAB5A4FU69 1503 aa26.58■■□□□ 1.85
GCDH-213ENST00000590627 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
GCDH-213ENST00000590627 HECW2Q9P2P5 1572 aa26.55■■□□□ 1.84
GCDH-213ENST00000590627 CLIP1P30622 1438 aa26.53■■□□□ 1.84
GCDH-213ENST00000590627 PLEKHD1A6NEE1 506 aa26.51■■□□□ 1.83
GCDH-213ENST00000590627 RAPGEF3O95398 923 aa26.49■■□□□ 1.83
GCDH-213ENST00000590627 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
GCDH-213ENST00000590627 FRMPD1Q5SYB0 1578 aa26.46■■□□□ 1.83
GCDH-213ENST00000590627 ADAMTSL3P82987 1691 aa26.42■■□□□ 1.82
GCDH-213ENST00000590627 CFAP74Q9C0B2 1584 aa26.41■■□□□ 1.82
GCDH-213ENST00000590627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.41■■□□□ 1.82
GCDH-213ENST00000590627 DENND4BO75064 1496 aaPredicted RBP26.39■■□□□ 1.82
GCDH-213ENST00000590627 AKNAQ7Z591 1439 aa26.39■■□□□ 1.81
GCDH-213ENST00000590627 FANCAO15360 1455 aa26.38■■□□□ 1.81
GCDH-213ENST00000590627 RICTORQ6R327 1708 aa26.37■■□□□ 1.81
GCDH-213ENST00000590627 TTC37Q6PGP7 1564 aa26.36■■□□□ 1.81
GCDH-213ENST00000590627 BCORL1Q5H9F3 1711 aa26.36■■□□□ 1.81
GCDH-213ENST00000590627 PTPRMP28827 1452 aa26.36■■□□□ 1.81
GCDH-213ENST00000590627 CDK13Q14004 1512 aaKnown RBP26.34■■□□□ 1.81
GCDH-213ENST00000590627 ARHGEF40Q8TER5 1519 aa26.34■■□□□ 1.81
GCDH-213ENST00000590627 FMN1Q68DA7 1419 aa26.34■■□□□ 1.81
GCDH-213ENST00000590627 ILDR1Q86SU0 546 aaPredicted RBP26.34■■□□□ 1.81
GCDH-213ENST00000590627 HECW1Q76N89 1606 aa26.3■■□□□ 1.8
GCDH-213ENST00000590627 ARID4BQ4LE39 1312 aaPredicted RBP26.3■■□□□ 1.8
GCDH-213ENST00000590627 ZMYM4Q5VZL5 1548 aa26.29■■□□□ 1.8
GCDH-213ENST00000590627 PLCH2O75038 1416 aa26.27■■□□□ 1.8
GCDH-213ENST00000590627 MADDQ8WXG6 1647 aa26.27■■□□□ 1.8
GCDH-213ENST00000590627 MAGI2Q86UL8 1455 aa26.25■■□□□ 1.79
GCDH-213ENST00000590627 CDK11AQ9UQ88 783 aaPredicted RBP26.23■■□□□ 1.79
GCDH-213ENST00000590627 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
GCDH-213ENST00000590627 ZFYVE16Q7Z3T8 1539 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms