RNA–Protein interactions for RNA: ENST00000590570.1

HKR1-217, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4

Gene HKR1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-217ENST00000590570 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
HKR1-217ENST00000590570 CLCN6P51797 869 aa13.27□□□□□ -0.29
HKR1-217ENST00000590570 THOC2Q8NI27 1593 aaKnown RBP13.21□□□□□ -0.29
HKR1-217ENST00000590570 NESP48681 1621 aa13.21□□□□□ -0.3
HKR1-217ENST00000590570 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
HKR1-217ENST00000590570 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
HKR1-217ENST00000590570 HRCP23327 699 aa13.15□□□□□ -0.3
HKR1-217ENST00000590570 ZCCHC6Q5VYS8 1495 aaKnown RBP13.13□□□□□ -0.31
HKR1-217ENST00000590570 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
HKR1-217ENST00000590570 PLSCR2Q9NRY7 297 aa13.09□□□□□ -0.31
HKR1-217ENST00000590570 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
HKR1-217ENST00000590570 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
HKR1-217ENST00000590570 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
HKR1-217ENST00000590570 BAZ1AQ9NRL2 1556 aaPredicted RBP13.02□□□□□ -0.33
HKR1-217ENST00000590570 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
HKR1-217ENST00000590570 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
HKR1-217ENST00000590570 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
HKR1-217ENST00000590570 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
HKR1-217ENST00000590570 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
HKR1-217ENST00000590570 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
HKR1-217ENST00000590570 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
HKR1-217ENST00000590570 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
HKR1-217ENST00000590570 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
HKR1-217ENST00000590570 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
HKR1-217ENST00000590570 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
HKR1-217ENST00000590570 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
HKR1-217ENST00000590570 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
HKR1-217ENST00000590570 PDS5BQ9NTI5 1447 aa12.83□□□□□ -0.36
HKR1-217ENST00000590570 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
HKR1-217ENST00000590570 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
HKR1-217ENST00000590570 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
HKR1-217ENST00000590570 WDR62O43379 1518 aa12.81□□□□□ -0.36
HKR1-217ENST00000590570 POTEMA6NI47 508 aa12.78□□□□□ -0.36
HKR1-217ENST00000590570 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
HKR1-217ENST00000590570 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
HKR1-217ENST00000590570 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
HKR1-217ENST00000590570 ILDR1Q86SU0 546 aaPredicted RBP12.74□□□□□ -0.37
HKR1-217ENST00000590570 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
HKR1-217ENST00000590570 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
HKR1-217ENST00000590570 SMARCA4P51532 1647 aa12.71□□□□□ -0.37
HKR1-217ENST00000590570 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
HKR1-217ENST00000590570 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
HKR1-217ENST00000590570 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
HKR1-217ENST00000590570 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
HKR1-217ENST00000590570 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
HKR1-217ENST00000590570 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
HKR1-217ENST00000590570 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
HKR1-217ENST00000590570 C7P10643 843 aa12.64□□□□□ -0.39
HKR1-217ENST00000590570 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
HKR1-217ENST00000590570 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
HKR1-217ENST00000590570 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
HKR1-217ENST00000590570 MAMSTRQ6ZN01 415 aa12.6□□□□□ -0.39
HKR1-217ENST00000590570 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
HKR1-217ENST00000590570 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
HKR1-217ENST00000590570 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
HKR1-217ENST00000590570 ERICH6Q7L0X2 663 aa12.54□□□□□ -0.4
HKR1-217ENST00000590570 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
HKR1-217ENST00000590570 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
HKR1-217ENST00000590570 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
HKR1-217ENST00000590570 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
HKR1-217ENST00000590570 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
HKR1-217ENST00000590570 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
HKR1-217ENST00000590570 LCE2DQ5TA82 110 aaPredicted RBP12.48□□□□□ -0.41
HKR1-217ENST00000590570 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
HKR1-217ENST00000590570 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
HKR1-217ENST00000590570 CHD1O14646 1710 aa12.42□□□□□ -0.42
HKR1-217ENST00000590570 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
HKR1-217ENST00000590570 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
HKR1-217ENST00000590570 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
HKR1-217ENST00000590570 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
HKR1-217ENST00000590570 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
HKR1-217ENST00000590570 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
HKR1-217ENST00000590570 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
HKR1-217ENST00000590570 EIF4G3O43432 1585 aaKnown RBP12.35□□□□□ -0.43
HKR1-217ENST00000590570 PROM2Q8N271 834 aa12.35□□□□□ -0.43
HKR1-217ENST00000590570 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
HKR1-217ENST00000590570 TIE1P35590 1138 aa12.34□□□□□ -0.43
HKR1-217ENST00000590570 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
HKR1-217ENST00000590570 MAP3K13O43283 966 aa12.31□□□□□ -0.44
HKR1-217ENST00000590570 CFTRP13569 1480 aa12.31□□□□□ -0.44
HKR1-217ENST00000590570 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
HKR1-217ENST00000590570 PPARGC1BQ86YN6 1023 aaKnown RBP12.28□□□□□ -0.44
HKR1-217ENST00000590570 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
HKR1-217ENST00000590570 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
HKR1-217ENST00000590570 SEC24BO95487 1268 aa12.27□□□□□ -0.45
HKR1-217ENST00000590570 FKBP8Q14318 412 aa12.26□□□□□ -0.45
HKR1-217ENST00000590570 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
HKR1-217ENST00000590570 COLQQ9Y215 455 aaPredicted RBP12.25□□□□□ -0.45
HKR1-217ENST00000590570 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
HKR1-217ENST00000590570 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
HKR1-217ENST00000590570 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
HKR1-217ENST00000590570 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
HKR1-217ENST00000590570 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
HKR1-217ENST00000590570 WIZO95785 1651 aa12.2□□□□□ -0.46
HKR1-217ENST00000590570 IER5LQ5T953 404 aa12.2□□□□□ -0.46
HKR1-217ENST00000590570 MIER1Q8N108 512 aa12.2□□□□□ -0.46
HKR1-217ENST00000590570 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
HKR1-217ENST00000590570 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
HKR1-217ENST00000590570 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
HKR1-217ENST00000590570 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms