RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
LSM12-203ENST00000590563 ADCY10Q96PN6 1610 aa24.87■■□□□ 1.57
LSM12-203ENST00000590563 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
LSM12-203ENST00000590563 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
LSM12-203ENST00000590563 JPH4Q96JJ6 628 aa24.8■■□□□ 1.56
LSM12-203ENST00000590563 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
LSM12-203ENST00000590563 ADGRL1O94910 1474 aa24.77■■□□□ 1.56
LSM12-203ENST00000590563 TSPOAP1O95153 1857 aa24.77■■□□□ 1.56
LSM12-203ENST00000590563 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
LSM12-203ENST00000590563 HECW2Q9P2P5 1572 aa24.76■■□□□ 1.55
LSM12-203ENST00000590563 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
LSM12-203ENST00000590563 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
LSM12-203ENST00000590563 PPRC1Q5VV67 1664 aaKnown RBP24.66■■□□□ 1.54
LSM12-203ENST00000590563 COL17A1Q9UMD9 1497 aaPredicted RBP24.55■■□□□ 1.52
LSM12-203ENST00000590563 GLI2P10070 1586 aa24.54■■□□□ 1.52
LSM12-203ENST00000590563 KIAA0586Q9BVV6 1533 aa24.49■■□□□ 1.51
LSM12-203ENST00000590563 ABCC2Q92887 1545 aa24.46■■□□□ 1.51
LSM12-203ENST00000590563 ASXL2Q76L83 1435 aa24.46■■□□□ 1.51
LSM12-203ENST00000590563 FBXO41Q8TF61 875 aa24.44■■□□□ 1.5
LSM12-203ENST00000590563 PLB1Q6P1J6 1458 aa24.43■■□□□ 1.5
LSM12-203ENST00000590563 PTPRGP23470 1445 aa24.4■■□□□ 1.5
LSM12-203ENST00000590563 MAP3K4Q9Y6R4 1608 aa24.39■■□□□ 1.49
LSM12-203ENST00000590563 CUL7Q14999 1698 aa24.35■■□□□ 1.49
LSM12-203ENST00000590563 EPRSP07814 1512 aaKnown RBP24.33■■□□□ 1.49
LSM12-203ENST00000590563 UHRF1BP1LA0JNW5 1464 aa24.32■■□□□ 1.48
LSM12-203ENST00000590563 TNIKQ9UKE5 1360 aa24.29■■□□□ 1.48
LSM12-203ENST00000590563 TEX14Q8IWB6 1497 aa24.29■■□□□ 1.48
LSM12-203ENST00000590563 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
LSM12-203ENST00000590563 IGF1RP08069 1367 aa24.25■■□□□ 1.47
LSM12-203ENST00000590563 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
LSM12-203ENST00000590563 UACAQ9BZF9 1416 aa24.22■■□□□ 1.47
LSM12-203ENST00000590563 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
LSM12-203ENST00000590563 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
LSM12-203ENST00000590563 DISP1Q96F81 1524 aa24.15■■□□□ 1.46
LSM12-203ENST00000590563 KIF21BO75037 1637 aa24.13■■□□□ 1.45
LSM12-203ENST00000590563 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
LSM12-203ENST00000590563 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
LSM12-203ENST00000590563 LMTK3Q96Q04 1460 aa24.08■■□□□ 1.45
LSM12-203ENST00000590563 WDR7Q9Y4E6 1490 aa24.07■■□□□ 1.44
LSM12-203ENST00000590563 MAGI3Q5TCQ9 1506 aa24.06■■□□□ 1.44
LSM12-203ENST00000590563 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
LSM12-203ENST00000590563 PTPRMP28827 1452 aa24.02■■□□□ 1.44
LSM12-203ENST00000590563 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
LSM12-203ENST00000590563 ADAMTSL3P82987 1691 aa24■■□□□ 1.43
LSM12-203ENST00000590563 CFAP43Q8NDM7 1665 aa24■■□□□ 1.43
LSM12-203ENST00000590563 CD109Q6YHK3 1445 aa23.98■■□□□ 1.43
LSM12-203ENST00000590563 UGGT2Q9NYU1 1516 aa23.97■■□□□ 1.43
LSM12-203ENST00000590563 KIAA0556O60303 1618 aa23.96■■□□□ 1.43
LSM12-203ENST00000590563 PCF11O94913 1555 aaKnown RBP23.96■■□□□ 1.43
LSM12-203ENST00000590563 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
LSM12-203ENST00000590563 ILDR2Q71H61 639 aa23.89■■□□□ 1.41
LSM12-203ENST00000590563 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
LSM12-203ENST00000590563 SOCS7O14512 581 aa23.83■■□□□ 1.41
LSM12-203ENST00000590563 BCORL1Q5H9F3 1711 aa23.83■■□□□ 1.41
LSM12-203ENST00000590563 ABCA8O94911 1581 aa23.82■■□□□ 1.4
LSM12-203ENST00000590563 KCNH8Q96L42 1107 aa23.8■■□□□ 1.4
LSM12-203ENST00000590563 DISP3Q9P2K9 1392 aa23.75■■□□□ 1.39
LSM12-203ENST00000590563 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
LSM12-203ENST00000590563 CERKQ8TCT0 537 aa23.73■■□□□ 1.39
LSM12-203ENST00000590563 RAPGEF2Q9Y4G8 1499 aa23.72■■□□□ 1.39
LSM12-203ENST00000590563 HSPA2P54652 639 aa23.7■■□□□ 1.38
LSM12-203ENST00000590563 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.38
LSM12-203ENST00000590563 RAPGEF3O95398 923 aa23.68■■□□□ 1.38
LSM12-203ENST00000590563 ABCA9Q8IUA7 1624 aa23.67■■□□□ 1.38
LSM12-203ENST00000590563 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
LSM12-203ENST00000590563 ARHGEF40Q8TER5 1519 aa23.63■■□□□ 1.37
LSM12-203ENST00000590563 NEO1Q92859 1461 aa23.62■■□□□ 1.37
LSM12-203ENST00000590563 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
LSM12-203ENST00000590563 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
LSM12-203ENST00000590563 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
LSM12-203ENST00000590563 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
LSM12-203ENST00000590563 ATP10BO94823 1461 aa23.57■■□□□ 1.36
LSM12-203ENST00000590563 SIGLEC1Q9BZZ2 1709 aa23.54■■□□□ 1.36
LSM12-203ENST00000590563 ARID3CA6NKF2 412 aa23.51■■□□□ 1.35
LSM12-203ENST00000590563 RICTORQ6R327 1708 aa23.49■■□□□ 1.35
LSM12-203ENST00000590563 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
LSM12-203ENST00000590563 TTC37Q6PGP7 1564 aa23.45■■□□□ 1.34
LSM12-203ENST00000590563 FANCAO15360 1455 aa23.44■■□□□ 1.34
LSM12-203ENST00000590563 FHOD3Q2V2M9 1422 aa23.43■■□□□ 1.34
LSM12-203ENST00000590563 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
LSM12-203ENST00000590563 DENND4BO75064 1496 aaPredicted RBP23.42■■□□□ 1.34
LSM12-203ENST00000590563 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
LSM12-203ENST00000590563 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
LSM12-203ENST00000590563 YEATS2Q9ULM3 1422 aa23.4■■□□□ 1.34
LSM12-203ENST00000590563 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
LSM12-203ENST00000590563 STRCQ7RTU9 1775 aa23.39■■□□□ 1.33
LSM12-203ENST00000590563 PREX1Q8TCU6 1659 aa23.38■■□□□ 1.33
LSM12-203ENST00000590563 ZFYVE16Q7Z3T8 1539 aa23.37■■□□□ 1.33
LSM12-203ENST00000590563 EFCAB5A4FU69 1503 aa23.34■■□□□ 1.33
LSM12-203ENST00000590563 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.32
LSM12-203ENST00000590563 ARHGEF12Q9NZN5 1544 aa23.33■■□□□ 1.32
LSM12-203ENST00000590563 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
LSM12-203ENST00000590563 CFAP74Q9C0B2 1584 aa23.29■■□□□ 1.32
LSM12-203ENST00000590563 MLECQ14165 292 aa23.28■■□□□ 1.32
LSM12-203ENST00000590563 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
LSM12-203ENST00000590563 NUP153P49790 1475 aaKnown RBP23.28■■□□□ 1.32
LSM12-203ENST00000590563 MAGI2Q86UL8 1455 aa23.28■■□□□ 1.32
LSM12-203ENST00000590563 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
LSM12-203ENST00000590563 LTBP4Q8N2S1 1624 aa23.27■■□□□ 1.32
LSM12-203ENST00000590563 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms