RNA–Protein interactions for RNA: ENST00000590308.1

LDLRAD4-214, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

Gene LDLRAD4, Length 3,720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-214ENST00000590308 DAXXQ9UER7 740 aaPredicted RBP18.26■□□□□ 0.51
LDLRAD4-214ENST00000590308 ABCC9O60706 1549 aa18.25■□□□□ 0.51
LDLRAD4-214ENST00000590308 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
LDLRAD4-214ENST00000590308 RSPH6AQ9H0K4 717 aa18.24■□□□□ 0.51
LDLRAD4-214ENST00000590308 ZMYND15Q9H091 742 aa18.24■□□□□ 0.51
LDLRAD4-214ENST00000590308 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
LDLRAD4-214ENST00000590308 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
LDLRAD4-214ENST00000590308 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
LDLRAD4-214ENST00000590308 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
LDLRAD4-214ENST00000590308 CLIP1P30622 1438 aa18.19■□□□□ 0.5
LDLRAD4-214ENST00000590308 GSE1Q14687 1217 aa18.19■□□□□ 0.5
LDLRAD4-214ENST00000590308 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
LDLRAD4-214ENST00000590308 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
LDLRAD4-214ENST00000590308 ABCC8Q09428 1581 aa18.14■□□□□ 0.5
LDLRAD4-214ENST00000590308 WASHC2AQ641Q2 1341 aa18.14■□□□□ 0.49
LDLRAD4-214ENST00000590308 ARXQ96QS3 562 aa18.13■□□□□ 0.49
LDLRAD4-214ENST00000590308 NAP1L5Q96NT1 182 aaPredicted RBP18.12■□□□□ 0.49
LDLRAD4-214ENST00000590308 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
LDLRAD4-214ENST00000590308 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
LDLRAD4-214ENST00000590308 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
LDLRAD4-214ENST00000590308 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
LDLRAD4-214ENST00000590308 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
LDLRAD4-214ENST00000590308 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
LDLRAD4-214ENST00000590308 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
LDLRAD4-214ENST00000590308 KANK4Q5T7N3 995 aaPredicted RBP18.06■□□□□ 0.48
LDLRAD4-214ENST00000590308 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
LDLRAD4-214ENST00000590308 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
LDLRAD4-214ENST00000590308 HSP90AA2PQ14568 343 aaPredicted RBP18.05■□□□□ 0.48
LDLRAD4-214ENST00000590308 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
LDLRAD4-214ENST00000590308 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
LDLRAD4-214ENST00000590308 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
LDLRAD4-214ENST00000590308 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
LDLRAD4-214ENST00000590308 NFKBIBQ15653 356 aa18■□□□□ 0.47
LDLRAD4-214ENST00000590308 EEA1Q15075 1411 aa17.98■□□□□ 0.47
LDLRAD4-214ENST00000590308 NACADO15069 1562 aa17.98■□□□□ 0.47
LDLRAD4-214ENST00000590308 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
LDLRAD4-214ENST00000590308 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
LDLRAD4-214ENST00000590308 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
LDLRAD4-214ENST00000590308 RAB3GAP2Q9H2M9 1393 aa17.96■□□□□ 0.47
LDLRAD4-214ENST00000590308 PDE4AP27815 886 aa17.96■□□□□ 0.47
LDLRAD4-214ENST00000590308 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
LDLRAD4-214ENST00000590308 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
LDLRAD4-214ENST00000590308 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
LDLRAD4-214ENST00000590308 DDRGK1Q96HY6 314 aa17.92■□□□□ 0.46
LDLRAD4-214ENST00000590308 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
LDLRAD4-214ENST00000590308 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
LDLRAD4-214ENST00000590308 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
LDLRAD4-214ENST00000590308 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
LDLRAD4-214ENST00000590308 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
LDLRAD4-214ENST00000590308 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
LDLRAD4-214ENST00000590308 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
LDLRAD4-214ENST00000590308 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
LDLRAD4-214ENST00000590308 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
LDLRAD4-214ENST00000590308 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
LDLRAD4-214ENST00000590308 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
LDLRAD4-214ENST00000590308 RRAGDQ9NQL2 400 aaPredicted RBP17.79■□□□□ 0.44
LDLRAD4-214ENST00000590308 BACH2Q9BYV9 841 aa17.78■□□□□ 0.44
LDLRAD4-214ENST00000590308 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
LDLRAD4-214ENST00000590308 RRP9O43818 475 aaKnown RBP17.77■□□□□ 0.44
LDLRAD4-214ENST00000590308 EXOC6Q8TAG9 804 aa17.77■□□□□ 0.43
LDLRAD4-214ENST00000590308 SKAP1Q86WV1 359 aa17.76■□□□□ 0.43
LDLRAD4-214ENST00000590308 RBM10P98175 930 aaKnown RBP17.75■□□□□ 0.43
LDLRAD4-214ENST00000590308 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
LDLRAD4-214ENST00000590308 HSPA5P11021 654 aaKnown RBP17.74■□□□□ 0.43
LDLRAD4-214ENST00000590308 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
LDLRAD4-214ENST00000590308 WIZO95785 1651 aa17.71■□□□□ 0.43
LDLRAD4-214ENST00000590308 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
LDLRAD4-214ENST00000590308 POGKQ9P215 609 aa17.68■□□□□ 0.42
LDLRAD4-214ENST00000590308 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
LDLRAD4-214ENST00000590308 GZF1Q9H116 711 aaPredicted RBP17.67■□□□□ 0.42
LDLRAD4-214ENST00000590308 MAPKBP1O60336 1514 aa17.67■□□□□ 0.42
LDLRAD4-214ENST00000590308 ARID3AQ99856 593 aa17.67■□□□□ 0.42
LDLRAD4-214ENST00000590308 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
LDLRAD4-214ENST00000590308 SLKQ9H2G2 1235 aaPredicted RBP17.64■□□□□ 0.41
LDLRAD4-214ENST00000590308 MS4A1P11836 297 aa17.63■□□□□ 0.41
LDLRAD4-214ENST00000590308 KIF21BO75037 1637 aa17.63■□□□□ 0.41
LDLRAD4-214ENST00000590308 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
LDLRAD4-214ENST00000590308 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
LDLRAD4-214ENST00000590308 PDE4CQ08493 712 aa17.61■□□□□ 0.41
LDLRAD4-214ENST00000590308 RGS3P49796 1198 aa17.6■□□□□ 0.41
LDLRAD4-214ENST00000590308 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
LDLRAD4-214ENST00000590308 RRP1P56182 461 aaKnown RBP17.58■□□□□ 0.4
LDLRAD4-214ENST00000590308 PLIN1O60240 522 aa17.56■□□□□ 0.4
LDLRAD4-214ENST00000590308 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
LDLRAD4-214ENST00000590308 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
LDLRAD4-214ENST00000590308 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
LDLRAD4-214ENST00000590308 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
LDLRAD4-214ENST00000590308 AAMPQ13685 434 aa17.54■□□□□ 0.4
LDLRAD4-214ENST00000590308 FGD1P98174 961 aa17.5■□□□□ 0.39
LDLRAD4-214ENST00000590308 SPRYD3Q8NCJ5 442 aa17.5■□□□□ 0.39
LDLRAD4-214ENST00000590308 PANK2Q9BZ23 570 aa17.5■□□□□ 0.39
LDLRAD4-214ENST00000590308 CLCN1P35523 988 aa17.49■□□□□ 0.39
LDLRAD4-214ENST00000590308 CNTLNQ9NXG0 1405 aa17.48■□□□□ 0.39
LDLRAD4-214ENST00000590308 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
LDLRAD4-214ENST00000590308 CUX2O14529 1486 aa17.47■□□□□ 0.39
LDLRAD4-214ENST00000590308 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
LDLRAD4-214ENST00000590308 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.38
LDLRAD4-214ENST00000590308 FAM13BQ9NYF5 915 aa17.45■□□□□ 0.38
LDLRAD4-214ENST00000590308 BECN1Q14457 450 aa17.44■□□□□ 0.38
LDLRAD4-214ENST00000590308 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms