RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 IGF1RP08069 1367 aa24.61■■□□□ 1.53
SF3A2-205ENST00000590034 CUL7Q14999 1698 aa24.6■■□□□ 1.53
SF3A2-205ENST00000590034 ADCY10Q96PN6 1610 aa24.59■■□□□ 1.53
SF3A2-205ENST00000590034 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
SF3A2-205ENST00000590034 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
SF3A2-205ENST00000590034 KIAA0586Q9BVV6 1533 aa24.57■■□□□ 1.52
SF3A2-205ENST00000590034 MAPKBP1O60336 1514 aa24.55■■□□□ 1.52
SF3A2-205ENST00000590034 ABCC10Q5T3U5 1492 aa24.53■■□□□ 1.52
SF3A2-205ENST00000590034 DIP2BQ9P265 1576 aa24.5■■□□□ 1.51
SF3A2-205ENST00000590034 FAM69CQ0P6D2 419 aa24.47■■□□□ 1.51
SF3A2-205ENST00000590034 NPM1P06748 294 aaKnown RBP eCLIP24.44■■□□□ 1.5
SF3A2-205ENST00000590034 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
SF3A2-205ENST00000590034 PTPRGP23470 1445 aa24.35■■□□□ 1.49
SF3A2-205ENST00000590034 TSPOAP1O95153 1857 aa24.35■■□□□ 1.49
SF3A2-205ENST00000590034 IQGAP2Q13576 1575 aa24.35■■□□□ 1.49
SF3A2-205ENST00000590034 KDM6BO15054 1643 aa24.3■■□□□ 1.48
SF3A2-205ENST00000590034 TNIKQ9UKE5 1360 aa24.29■■□□□ 1.48
SF3A2-205ENST00000590034 CARMIL2Q6F5E8 1435 aa24.29■■□□□ 1.48
SF3A2-205ENST00000590034 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
SF3A2-205ENST00000590034 ABCC2Q92887 1545 aa24.28■■□□□ 1.48
SF3A2-205ENST00000590034 DISP1Q96F81 1524 aa24.26■■□□□ 1.47
SF3A2-205ENST00000590034 UHRF1BP1LA0JNW5 1464 aa24.22■■□□□ 1.47
SF3A2-205ENST00000590034 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
SF3A2-205ENST00000590034 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
SF3A2-205ENST00000590034 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
SF3A2-205ENST00000590034 UGGT2Q9NYU1 1516 aa24.19■■□□□ 1.46
SF3A2-205ENST00000590034 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
SF3A2-205ENST00000590034 GLI2P10070 1586 aa24.17■■□□□ 1.46
SF3A2-205ENST00000590034 PLB1Q6P1J6 1458 aa24.17■■□□□ 1.46
SF3A2-205ENST00000590034 KIAA0556O60303 1618 aa24.15■■□□□ 1.46
SF3A2-205ENST00000590034 KDM5BQ9UGL1 1544 aa24.12■■□□□ 1.45
SF3A2-205ENST00000590034 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
SF3A2-205ENST00000590034 ZCCHC11Q5TAX3 1644 aaKnown RBP24.1■■□□□ 1.45
SF3A2-205ENST00000590034 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
SF3A2-205ENST00000590034 CTTNBP2Q8WZ74 1663 aa24.08■■□□□ 1.44
SF3A2-205ENST00000590034 MAP3K4Q9Y6R4 1608 aa24.07■■□□□ 1.44
SF3A2-205ENST00000590034 COL17A1Q9UMD9 1497 aaPredicted RBP24.02■■□□□ 1.44
SF3A2-205ENST00000590034 WDR7Q9Y4E6 1490 aa23.95■■□□□ 1.42
SF3A2-205ENST00000590034 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
SF3A2-205ENST00000590034 ABCA8O94911 1581 aa23.94■■□□□ 1.42
SF3A2-205ENST00000590034 TEX14Q8IWB6 1497 aa23.93■■□□□ 1.42
SF3A2-205ENST00000590034 GOLGA3Q08378 1498 aa23.92■■□□□ 1.42
SF3A2-205ENST00000590034 ADGRL1O94910 1474 aa23.91■■□□□ 1.42
SF3A2-205ENST00000590034 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
SF3A2-205ENST00000590034 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
SF3A2-205ENST00000590034 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
SF3A2-205ENST00000590034 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
SF3A2-205ENST00000590034 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
SF3A2-205ENST00000590034 ATP10BO94823 1461 aa23.71■■□□□ 1.39
SF3A2-205ENST00000590034 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
SF3A2-205ENST00000590034 ARID3CA6NKF2 412 aa23.7■■□□□ 1.38
SF3A2-205ENST00000590034 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
SF3A2-205ENST00000590034 KIF21BO75037 1637 aa23.65■■□□□ 1.38
SF3A2-205ENST00000590034 ABCA9Q8IUA7 1624 aa23.65■■□□□ 1.38
SF3A2-205ENST00000590034 HECW2Q9P2P5 1572 aa23.65■■□□□ 1.38
SF3A2-205ENST00000590034 RAPGEF6Q8TEU7 1601 aa23.64■■□□□ 1.38
SF3A2-205ENST00000590034 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
SF3A2-205ENST00000590034 NUP153P49790 1475 aaKnown RBP23.56■■□□□ 1.36
SF3A2-205ENST00000590034 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
SF3A2-205ENST00000590034 EEA1Q15075 1411 aa23.53■■□□□ 1.36
SF3A2-205ENST00000590034 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
SF3A2-205ENST00000590034 ILDR1Q86SU0 546 aaPredicted RBP23.51■■□□□ 1.35
SF3A2-205ENST00000590034 FRMPD1Q5SYB0 1578 aa23.5■■□□□ 1.35
SF3A2-205ENST00000590034 NEO1Q92859 1461 aa23.49■■□□□ 1.35
SF3A2-205ENST00000590034 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
SF3A2-205ENST00000590034 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
SF3A2-205ENST00000590034 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
SF3A2-205ENST00000590034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
SF3A2-205ENST00000590034 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
SF3A2-205ENST00000590034 ADAMTSL3P82987 1691 aa23.45■■□□□ 1.34
SF3A2-205ENST00000590034 EFCAB5A4FU69 1503 aa23.41■■□□□ 1.34
SF3A2-205ENST00000590034 RICTORQ6R327 1708 aa23.39■■□□□ 1.33
SF3A2-205ENST00000590034 PTPRMP28827 1452 aa23.38■■□□□ 1.33
SF3A2-205ENST00000590034 BCORL1Q5H9F3 1711 aa23.38■■□□□ 1.33
SF3A2-205ENST00000590034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.33
SF3A2-205ENST00000590034 TTC37Q6PGP7 1564 aa23.37■■□□□ 1.33
SF3A2-205ENST00000590034 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
SF3A2-205ENST00000590034 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
SF3A2-205ENST00000590034 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
SF3A2-205ENST00000590034 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.32
SF3A2-205ENST00000590034 FANCAO15360 1455 aa23.32■■□□□ 1.32
SF3A2-205ENST00000590034 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
SF3A2-205ENST00000590034 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
SF3A2-205ENST00000590034 DENND4BO75064 1496 aaPredicted RBP23.31■■□□□ 1.32
SF3A2-205ENST00000590034 SIGLEC1Q9BZZ2 1709 aa23.28■■□□□ 1.32
SF3A2-205ENST00000590034 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
SF3A2-205ENST00000590034 RIMS1Q86UR5 1692 aaKnown RBP23.25■■□□□ 1.31
SF3A2-205ENST00000590034 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
SF3A2-205ENST00000590034 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
SF3A2-205ENST00000590034 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
SF3A2-205ENST00000590034 PCF11O94913 1555 aaKnown RBP23.22■■□□□ 1.31
SF3A2-205ENST00000590034 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
SF3A2-205ENST00000590034 ZFYVE16Q7Z3T8 1539 aa23.21■■□□□ 1.31
SF3A2-205ENST00000590034 HECW1Q76N89 1606 aa23.2■■□□□ 1.3
SF3A2-205ENST00000590034 LMTK3Q96Q04 1460 aa23.2■■□□□ 1.3
SF3A2-205ENST00000590034 PLCH2O75038 1416 aa23.18■■□□□ 1.3
SF3A2-205ENST00000590034 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
SF3A2-205ENST00000590034 POGZQ7Z3K3 1410 aa23.16■■□□□ 1.3
SF3A2-205ENST00000590034 KIF14Q15058 1648 aa23.16■■□□□ 1.3
SF3A2-205ENST00000590034 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms