RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 ILDR1Q86SU0 546 aaPredicted RBP23.27■■□□□ 1.32
NEDD4L-227ENST00000590020 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
NEDD4L-227ENST00000590020 DIP2BQ9P265 1576 aa23.26■■□□□ 1.31
NEDD4L-227ENST00000590020 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
NEDD4L-227ENST00000590020 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
NEDD4L-227ENST00000590020 NPM1P06748 294 aaKnown RBP eCLIP23.24■■□□□ 1.31
NEDD4L-227ENST00000590020 KDM6BO15054 1643 aa23.22■■□□□ 1.31
NEDD4L-227ENST00000590020 MAPKBP1O60336 1514 aa23.22■■□□□ 1.31
NEDD4L-227ENST00000590020 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
NEDD4L-227ENST00000590020 TSPOAP1O95153 1857 aa23.21■■□□□ 1.31
NEDD4L-227ENST00000590020 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
NEDD4L-227ENST00000590020 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
NEDD4L-227ENST00000590020 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
NEDD4L-227ENST00000590020 ADGRL1O94910 1474 aa22.96■■□□□ 1.27
NEDD4L-227ENST00000590020 KIAA0586Q9BVV6 1533 aa22.96■■□□□ 1.27
NEDD4L-227ENST00000590020 PPRC1Q5VV67 1664 aaKnown RBP22.93■■□□□ 1.26
NEDD4L-227ENST00000590020 PTPRGP23470 1445 aa22.91■■□□□ 1.26
NEDD4L-227ENST00000590020 ASXL2Q76L83 1435 aa22.87■■□□□ 1.25
NEDD4L-227ENST00000590020 IGF1RP08069 1367 aa22.87■■□□□ 1.25
NEDD4L-227ENST00000590020 HECW2Q9P2P5 1572 aa22.85■■□□□ 1.25
NEDD4L-227ENST00000590020 ABCC2Q92887 1545 aa22.85■■□□□ 1.25
NEDD4L-227ENST00000590020 COL17A1Q9UMD9 1497 aaPredicted RBP22.84■■□□□ 1.25
NEDD4L-227ENST00000590020 CUL7Q14999 1698 aa22.83■■□□□ 1.24
NEDD4L-227ENST00000590020 GLI2P10070 1586 aa22.81■■□□□ 1.24
NEDD4L-227ENST00000590020 PLB1Q6P1J6 1458 aa22.8■■□□□ 1.24
NEDD4L-227ENST00000590020 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
NEDD4L-227ENST00000590020 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
NEDD4L-227ENST00000590020 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
NEDD4L-227ENST00000590020 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
NEDD4L-227ENST00000590020 MAP3K4Q9Y6R4 1608 aa22.71■■□□□ 1.23
NEDD4L-227ENST00000590020 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
NEDD4L-227ENST00000590020 UACAQ9BZF9 1416 aa22.7■■□□□ 1.22
NEDD4L-227ENST00000590020 UHRF1BP1LA0JNW5 1464 aa22.7■■□□□ 1.22
NEDD4L-227ENST00000590020 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
NEDD4L-227ENST00000590020 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
NEDD4L-227ENST00000590020 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
NEDD4L-227ENST00000590020 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.22
NEDD4L-227ENST00000590020 KDM5BQ9UGL1 1544 aa22.63■■□□□ 1.21
NEDD4L-227ENST00000590020 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
NEDD4L-227ENST00000590020 FBXO41Q8TF61 875 aa22.51■■□□□ 1.19
NEDD4L-227ENST00000590020 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
NEDD4L-227ENST00000590020 KIF21BO75037 1637 aa22.49■■□□□ 1.19
NEDD4L-227ENST00000590020 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
NEDD4L-227ENST00000590020 KCNH8Q96L42 1107 aa22.49■■□□□ 1.19
NEDD4L-227ENST00000590020 CD109Q6YHK3 1445 aa22.47■■□□□ 1.19
NEDD4L-227ENST00000590020 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
NEDD4L-227ENST00000590020 MAGI3Q5TCQ9 1506 aa22.42■■□□□ 1.18
NEDD4L-227ENST00000590020 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
NEDD4L-227ENST00000590020 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
NEDD4L-227ENST00000590020 PTPRMP28827 1452 aa22.32■■□□□ 1.16
NEDD4L-227ENST00000590020 ABCA8O94911 1581 aa22.32■■□□□ 1.16
NEDD4L-227ENST00000590020 ADAMTSL3P82987 1691 aa22.29■■□□□ 1.16
NEDD4L-227ENST00000590020 CTTNBP2Q8WZ74 1663 aa22.28■■□□□ 1.16
NEDD4L-227ENST00000590020 ARAP3Q8WWN8 1544 aa22.27■■□□□ 1.16
NEDD4L-227ENST00000590020 RAPGEF3O95398 923 aa22.24■■□□□ 1.15
NEDD4L-227ENST00000590020 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
NEDD4L-227ENST00000590020 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
NEDD4L-227ENST00000590020 MADDQ8WXG6 1647 aa22.2■■□□□ 1.15
NEDD4L-227ENST00000590020 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
NEDD4L-227ENST00000590020 BCORL1Q5H9F3 1711 aa22.18■■□□□ 1.14
NEDD4L-227ENST00000590020 LMTK3Q96Q04 1460 aa22.18■■□□□ 1.14
NEDD4L-227ENST00000590020 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
NEDD4L-227ENST00000590020 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
NEDD4L-227ENST00000590020 ATP10BO94823 1461 aa22.15■■□□□ 1.14
NEDD4L-227ENST00000590020 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
NEDD4L-227ENST00000590020 HSPA2P54652 639 aa22.14■■□□□ 1.13
NEDD4L-227ENST00000590020 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
NEDD4L-227ENST00000590020 RIMS1Q86UR5 1692 aaKnown RBP22.12■■□□□ 1.13
NEDD4L-227ENST00000590020 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
NEDD4L-227ENST00000590020 NEO1Q92859 1461 aa22.06■■□□□ 1.12
NEDD4L-227ENST00000590020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
NEDD4L-227ENST00000590020 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
NEDD4L-227ENST00000590020 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
NEDD4L-227ENST00000590020 CERKQ8TCT0 537 aa22.01■■□□□ 1.11
NEDD4L-227ENST00000590020 ARHGEF40Q8TER5 1519 aa22.01■■□□□ 1.11
NEDD4L-227ENST00000590020 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
NEDD4L-227ENST00000590020 PRXQ9BXM0 1461 aa22■■□□□ 1.11
NEDD4L-227ENST00000590020 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
NEDD4L-227ENST00000590020 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
NEDD4L-227ENST00000590020 SIGLEC1Q9BZZ2 1709 aa21.97■■□□□ 1.11
NEDD4L-227ENST00000590020 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
NEDD4L-227ENST00000590020 MLECQ14165 292 aa21.94■■□□□ 1.1
NEDD4L-227ENST00000590020 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
NEDD4L-227ENST00000590020 DISP3Q9P2K9 1392 aa21.93■■□□□ 1.1
NEDD4L-227ENST00000590020 SAMD9Q5K651 1589 aa21.91■■□□□ 1.1
NEDD4L-227ENST00000590020 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
NEDD4L-227ENST00000590020 AKNAQ7Z591 1439 aa21.9■■□□□ 1.1
NEDD4L-227ENST00000590020 YEATS2Q9ULM3 1422 aa21.9■■□□□ 1.1
NEDD4L-227ENST00000590020 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
NEDD4L-227ENST00000590020 FANCAO15360 1455 aa21.9■■□□□ 1.1
NEDD4L-227ENST00000590020 FHOD3Q2V2M9 1422 aa21.88■■□□□ 1.09
NEDD4L-227ENST00000590020 POGZQ7Z3K3 1410 aa21.88■■□□□ 1.09
NEDD4L-227ENST00000590020 ZFYVE16Q7Z3T8 1539 aa21.86■■□□□ 1.09
NEDD4L-227ENST00000590020 FER1L4A9Z1Z3 1794 aa21.86■■□□□ 1.09
NEDD4L-227ENST00000590020 SOCS7O14512 581 aa21.85■■□□□ 1.09
NEDD4L-227ENST00000590020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.83■■□□□ 1.09
NEDD4L-227ENST00000590020 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
NEDD4L-227ENST00000590020 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
NEDD4L-227ENST00000590020 TTC37Q6PGP7 1564 aa21.82■■□□□ 1.08
NEDD4L-227ENST00000590020 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms