RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
TPM4-211ENST00000589897 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
TPM4-211ENST00000589897 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
TPM4-211ENST00000589897 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.12
TPM4-211ENST00000589897 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
TPM4-211ENST00000589897 KDM6BO15054 1643 aa14.31□□□□□ -0.12
TPM4-211ENST00000589897 FBXO41Q8TF61 875 aa14.31□□□□□ -0.12
TPM4-211ENST00000589897 SHROOM2Q13796 1616 aa14.3□□□□□ -0.12
TPM4-211ENST00000589897 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
TPM4-211ENST00000589897 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
TPM4-211ENST00000589897 ADGRL1O94910 1474 aa14.22□□□□□ -0.13
TPM4-211ENST00000589897 IGF1RP08069 1367 aa14.21□□□□□ -0.14
TPM4-211ENST00000589897 CUL7Q14999 1698 aa14.2□□□□□ -0.14
TPM4-211ENST00000589897 PTPRGP23470 1445 aa14.16□□□□□ -0.14
TPM4-211ENST00000589897 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
TPM4-211ENST00000589897 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
TPM4-211ENST00000589897 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.14
TPM4-211ENST00000589897 ADCY10Q96PN6 1610 aa14.14□□□□□ -0.15
TPM4-211ENST00000589897 PLB1Q6P1J6 1458 aa14.13□□□□□ -0.15
TPM4-211ENST00000589897 KIAA0586Q9BVV6 1533 aa14.12□□□□□ -0.15
TPM4-211ENST00000589897 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
TPM4-211ENST00000589897 ASXL2Q76L83 1435 aa14.09□□□□□ -0.15
TPM4-211ENST00000589897 TSPOAP1O95153 1857 aa14.09□□□□□ -0.15
TPM4-211ENST00000589897 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
TPM4-211ENST00000589897 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
TPM4-211ENST00000589897 CARMIL2Q6F5E8 1435 aa14.06□□□□□ -0.16
TPM4-211ENST00000589897 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
TPM4-211ENST00000589897 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
TPM4-211ENST00000589897 GLI2P10070 1586 aa14.05□□□□□ -0.16
TPM4-211ENST00000589897 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
TPM4-211ENST00000589897 IQGAP2Q13576 1575 aa14.02□□□□□ -0.16
TPM4-211ENST00000589897 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
TPM4-211ENST00000589897 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
TPM4-211ENST00000589897 UACAQ9BZF9 1416 aa13.98□□□□□ -0.17
TPM4-211ENST00000589897 EPRSP07814 1512 aaKnown RBP13.97□□□□□ -0.17
TPM4-211ENST00000589897 SOCS7O14512 581 aa13.96□□□□□ -0.17
TPM4-211ENST00000589897 CTTNBP2Q8WZ74 1663 aa13.93□□□□□ -0.18
TPM4-211ENST00000589897 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
TPM4-211ENST00000589897 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.18
TPM4-211ENST00000589897 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
TPM4-211ENST00000589897 FAM9AQ8IZU1 332 aaPredicted RBP13.9□□□□□ -0.18
TPM4-211ENST00000589897 DISP1Q96F81 1524 aa13.9□□□□□ -0.19
TPM4-211ENST00000589897 CD109Q6YHK3 1445 aa13.9□□□□□ -0.19
TPM4-211ENST00000589897 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
TPM4-211ENST00000589897 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
TPM4-211ENST00000589897 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
TPM4-211ENST00000589897 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
TPM4-211ENST00000589897 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
TPM4-211ENST00000589897 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
TPM4-211ENST00000589897 MAP3K4Q9Y6R4 1608 aa13.86□□□□□ -0.19
TPM4-211ENST00000589897 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
TPM4-211ENST00000589897 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
TPM4-211ENST00000589897 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
TPM4-211ENST00000589897 EEA1Q15075 1411 aa13.84□□□□□ -0.19
TPM4-211ENST00000589897 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
TPM4-211ENST00000589897 PTPRMP28827 1452 aa13.83□□□□□ -0.2
TPM4-211ENST00000589897 ARID4BQ4LE39 1312 aaPredicted RBP13.83□□□□□ -0.2
TPM4-211ENST00000589897 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
TPM4-211ENST00000589897 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
TPM4-211ENST00000589897 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
TPM4-211ENST00000589897 ZCCHC11Q5TAX3 1644 aaKnown RBP13.78□□□□□ -0.2
TPM4-211ENST00000589897 ARAP3Q8WWN8 1544 aa13.76□□□□□ -0.21
TPM4-211ENST00000589897 HSPA2P54652 639 aa13.75□□□□□ -0.21
TPM4-211ENST00000589897 RAPGEF3O95398 923 aa13.74□□□□□ -0.21
TPM4-211ENST00000589897 CHIC1Q5VXU3 224 aa13.74□□□□□ -0.21
TPM4-211ENST00000589897 PCF11O94913 1555 aaKnown RBP13.74□□□□□ -0.21
TPM4-211ENST00000589897 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
TPM4-211ENST00000589897 ABCA8O94911 1581 aa13.72□□□□□ -0.21
TPM4-211ENST00000589897 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
TPM4-211ENST00000589897 ARID3CA6NKF2 412 aa13.71□□□□□ -0.21
TPM4-211ENST00000589897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
TPM4-211ENST00000589897 UBTFP17480 764 aaKnown RBP13.7□□□□□ -0.22
TPM4-211ENST00000589897 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
TPM4-211ENST00000589897 KIF21BO75037 1637 aa13.69□□□□□ -0.22
TPM4-211ENST00000589897 SAMD9Q5K651 1589 aa13.68□□□□□ -0.22
TPM4-211ENST00000589897 ADAMTSL3P82987 1691 aa13.68□□□□□ -0.22
TPM4-211ENST00000589897 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
TPM4-211ENST00000589897 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
TPM4-211ENST00000589897 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
TPM4-211ENST00000589897 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
TPM4-211ENST00000589897 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
TPM4-211ENST00000589897 ATP10BO94823 1461 aa13.62□□□□□ -0.23
TPM4-211ENST00000589897 NEO1Q92859 1461 aa13.61□□□□□ -0.23
TPM4-211ENST00000589897 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
TPM4-211ENST00000589897 YEATS2Q9ULM3 1422 aa13.58□□□□□ -0.24
TPM4-211ENST00000589897 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
TPM4-211ENST00000589897 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
TPM4-211ENST00000589897 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
TPM4-211ENST00000589897 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
TPM4-211ENST00000589897 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
TPM4-211ENST00000589897 MLECQ14165 292 aa13.55□□□□□ -0.24
TPM4-211ENST00000589897 AKNAQ7Z591 1439 aa13.55□□□□□ -0.24
TPM4-211ENST00000589897 DENND4BO75064 1496 aaPredicted RBP13.54□□□□□ -0.24
TPM4-211ENST00000589897 FANCAO15360 1455 aa13.53□□□□□ -0.24
TPM4-211ENST00000589897 FMN1Q68DA7 1419 aa13.52□□□□□ -0.25
TPM4-211ENST00000589897 ABCA9Q8IUA7 1624 aa13.52□□□□□ -0.25
TPM4-211ENST00000589897 CDK11AQ9UQ88 783 aaPredicted RBP13.49□□□□□ -0.25
TPM4-211ENST00000589897 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
TPM4-211ENST00000589897 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
TPM4-211ENST00000589897 CEBPAP49715 358 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms