RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 FAM69CQ0P6D2 419 aa11.69□□□□□ -0.54
VPS25-204ENST00000589577 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
VPS25-204ENST00000589577 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
VPS25-204ENST00000589577 PRG4Q92954 1404 aaPredicted RBP11.64□□□□□ -0.55
VPS25-204ENST00000589577 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
VPS25-204ENST00000589577 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
VPS25-204ENST00000589577 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
VPS25-204ENST00000589577 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
VPS25-204ENST00000589577 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
VPS25-204ENST00000589577 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
VPS25-204ENST00000589577 COL17A1Q9UMD9 1497 aaPredicted RBP11.52□□□□□ -0.56
VPS25-204ENST00000589577 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
VPS25-204ENST00000589577 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
VPS25-204ENST00000589577 WRNQ14191 1432 aaPredicted RBP eCLIP11.5□□□□□ -0.57
VPS25-204ENST00000589577 GLI2P10070 1586 aa11.5□□□□□ -0.57
VPS25-204ENST00000589577 TOP2BQ02880 1626 aa11.46□□□□□ -0.57
VPS25-204ENST00000589577 MAP3K4Q9Y6R4 1608 aa11.46□□□□□ -0.58
VPS25-204ENST00000589577 CUL7Q14999 1698 aa11.44□□□□□ -0.58
VPS25-204ENST00000589577 LMTK3Q96Q04 1460 aa11.43□□□□□ -0.58
VPS25-204ENST00000589577 ASXL2Q76L83 1435 aa11.43□□□□□ -0.58
VPS25-204ENST00000589577 ABCC2Q92887 1545 aa11.42□□□□□ -0.58
VPS25-204ENST00000589577 PLB1Q6P1J6 1458 aa11.39□□□□□ -0.59
VPS25-204ENST00000589577 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
VPS25-204ENST00000589577 EPRSP07814 1512 aaKnown RBP11.37□□□□□ -0.59
VPS25-204ENST00000589577 KIF21BO75037 1637 aa11.37□□□□□ -0.59
VPS25-204ENST00000589577 TEX14Q8IWB6 1497 aa11.35□□□□□ -0.59
VPS25-204ENST00000589577 PTPRGP23470 1445 aa11.35□□□□□ -0.59
VPS25-204ENST00000589577 ILDR2Q71H61 639 aa11.34□□□□□ -0.59
VPS25-204ENST00000589577 UHRF1BP1LA0JNW5 1464 aa11.33□□□□□ -0.6
VPS25-204ENST00000589577 ZCCHC11Q5TAX3 1644 aaKnown RBP11.32□□□□□ -0.6
VPS25-204ENST00000589577 SOCS7O14512 581 aa11.31□□□□□ -0.6
VPS25-204ENST00000589577 ADAMTSL3P82987 1691 aa11.3□□□□□ -0.6
VPS25-204ENST00000589577 KDM5BQ9UGL1 1544 aa11.3□□□□□ -0.6
VPS25-204ENST00000589577 TNIKQ9UKE5 1360 aa11.29□□□□□ -0.6
VPS25-204ENST00000589577 PCF11O94913 1555 aaKnown RBP11.28□□□□□ -0.6
VPS25-204ENST00000589577 PTPRMP28827 1452 aa11.28□□□□□ -0.6
VPS25-204ENST00000589577 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
VPS25-204ENST00000589577 UACAQ9BZF9 1416 aa11.27□□□□□ -0.6
VPS25-204ENST00000589577 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
VPS25-204ENST00000589577 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
VPS25-204ENST00000589577 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
VPS25-204ENST00000589577 MAGI3Q5TCQ9 1506 aa11.24□□□□□ -0.61
VPS25-204ENST00000589577 IQGAP2Q13576 1575 aa11.24□□□□□ -0.61
VPS25-204ENST00000589577 IGF1RP08069 1367 aa11.23□□□□□ -0.61
VPS25-204ENST00000589577 DISP3Q9P2K9 1392 aa11.23□□□□□ -0.61
VPS25-204ENST00000589577 WDR7Q9Y4E6 1490 aa11.23□□□□□ -0.61
VPS25-204ENST00000589577 MADDQ8WXG6 1647 aa11.22□□□□□ -0.61
VPS25-204ENST00000589577 BCORL1Q5H9F3 1711 aa11.21□□□□□ -0.61
VPS25-204ENST00000589577 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
VPS25-204ENST00000589577 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
VPS25-204ENST00000589577 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
VPS25-204ENST00000589577 KIAA0556O60303 1618 aa11.17□□□□□ -0.62
VPS25-204ENST00000589577 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
VPS25-204ENST00000589577 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
VPS25-204ENST00000589577 UGGT2Q9NYU1 1516 aa11.14□□□□□ -0.63
VPS25-204ENST00000589577 FRMPD1Q5SYB0 1578 aa11.14□□□□□ -0.63
VPS25-204ENST00000589577 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
VPS25-204ENST00000589577 HSPA2P54652 639 aa11.12□□□□□ -0.63
VPS25-204ENST00000589577 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
VPS25-204ENST00000589577 ABCA8O94911 1581 aa11.1□□□□□ -0.63
VPS25-204ENST00000589577 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
VPS25-204ENST00000589577 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
VPS25-204ENST00000589577 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
VPS25-204ENST00000589577 ARHGEF40Q8TER5 1519 aa11.07□□□□□ -0.64
VPS25-204ENST00000589577 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
VPS25-204ENST00000589577 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
VPS25-204ENST00000589577 RICTORQ6R327 1708 aa11.03□□□□□ -0.64
VPS25-204ENST00000589577 CTTNBP2Q8WZ74 1663 aa11.02□□□□□ -0.64
VPS25-204ENST00000589577 FER1L4A9Z1Z3 1794 aa11.02□□□□□ -0.65
VPS25-204ENST00000589577 TTC37Q6PGP7 1564 aa11.02□□□□□ -0.65
VPS25-204ENST00000589577 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
VPS25-204ENST00000589577 PHLDB1Q86UU1 1377 aa11.01□□□□□ -0.65
VPS25-204ENST00000589577 NEO1Q92859 1461 aa11□□□□□ -0.65
VPS25-204ENST00000589577 ARID4BQ4LE39 1312 aaPredicted RBP11□□□□□ -0.65
VPS25-204ENST00000589577 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
VPS25-204ENST00000589577 RAPGEF2Q9Y4G8 1499 aa10.97□□□□□ -0.65
VPS25-204ENST00000589577 LTBP4Q8N2S1 1624 aa10.96□□□□□ -0.65
VPS25-204ENST00000589577 ATP10BO94823 1461 aa10.96□□□□□ -0.65
VPS25-204ENST00000589577 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.65
VPS25-204ENST00000589577 ZMYM4Q5VZL5 1548 aa10.95□□□□□ -0.66
VPS25-204ENST00000589577 FANCAO15360 1455 aa10.95□□□□□ -0.66
VPS25-204ENST00000589577 YEATS2Q9ULM3 1422 aa10.95□□□□□ -0.66
VPS25-204ENST00000589577 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
VPS25-204ENST00000589577 ARHGEF12Q9NZN5 1544 aa10.92□□□□□ -0.66
VPS25-204ENST00000589577 FHOD3Q2V2M9 1422 aa10.92□□□□□ -0.66
VPS25-204ENST00000589577 ZFYVE16Q7Z3T8 1539 aa10.91□□□□□ -0.66
VPS25-204ENST00000589577 ARID3CA6NKF2 412 aa10.91□□□□□ -0.66
VPS25-204ENST00000589577 DENND4BO75064 1496 aaPredicted RBP10.91□□□□□ -0.66
VPS25-204ENST00000589577 IQSEC2Q5JU85 1478 aa10.91□□□□□ -0.66
VPS25-204ENST00000589577 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
VPS25-204ENST00000589577 EFCAB5A4FU69 1503 aa10.9□□□□□ -0.66
VPS25-204ENST00000589577 AKNAQ7Z591 1439 aa10.9□□□□□ -0.66
VPS25-204ENST00000589577 PTPRTO14522 1441 aa10.88□□□□□ -0.67
VPS25-204ENST00000589577 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
VPS25-204ENST00000589577 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
VPS25-204ENST00000589577 DMRT2Q9Y5R5 561 aa10.86□□□□□ -0.67
VPS25-204ENST00000589577 RAPGEF6Q8TEU7 1601 aa10.86□□□□□ -0.67
VPS25-204ENST00000589577 MED1Q15648 1581 aaPredicted RBP10.86□□□□□ -0.67
VPS25-204ENST00000589577 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
VPS25-204ENST00000589577 CEBPAP49715 358 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms