RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
APOC1-204ENST00000589078 ABCC10Q5T3U5 1492 aa16.53■□□□□ 0.24
APOC1-204ENST00000589078 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
APOC1-204ENST00000589078 ADCY10Q96PN6 1610 aa16.49■□□□□ 0.23
APOC1-204ENST00000589078 KDM6BO15054 1643 aa16.48■□□□□ 0.23
APOC1-204ENST00000589078 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
APOC1-204ENST00000589078 JPH4Q96JJ6 628 aa16.46■□□□□ 0.23
APOC1-204ENST00000589078 TSPOAP1O95153 1857 aa16.45■□□□□ 0.22
APOC1-204ENST00000589078 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
APOC1-204ENST00000589078 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
APOC1-204ENST00000589078 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
APOC1-204ENST00000589078 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
APOC1-204ENST00000589078 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
APOC1-204ENST00000589078 CUL7Q14999 1698 aa16.29■□□□□ 0.2
APOC1-204ENST00000589078 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
APOC1-204ENST00000589078 IGF1RP08069 1367 aa16.27■□□□□ 0.2
APOC1-204ENST00000589078 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
APOC1-204ENST00000589078 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
APOC1-204ENST00000589078 GLI2P10070 1586 aa16.22■□□□□ 0.19
APOC1-204ENST00000589078 PTPRGP23470 1445 aa16.22■□□□□ 0.19
APOC1-204ENST00000589078 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
APOC1-204ENST00000589078 ASXL2Q76L83 1435 aa16.2■□□□□ 0.18
APOC1-204ENST00000589078 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
APOC1-204ENST00000589078 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
APOC1-204ENST00000589078 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
APOC1-204ENST00000589078 MAP3K4Q9Y6R4 1608 aa16.16■□□□□ 0.18
APOC1-204ENST00000589078 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
APOC1-204ENST00000589078 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
APOC1-204ENST00000589078 CARMIL2Q6F5E8 1435 aa16.16■□□□□ 0.18
APOC1-204ENST00000589078 IQGAP2Q13576 1575 aa16.15■□□□□ 0.18
APOC1-204ENST00000589078 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
APOC1-204ENST00000589078 COL17A1Q9UMD9 1497 aaPredicted RBP16.14■□□□□ 0.17
APOC1-204ENST00000589078 EEA1Q15075 1411 aa16.12■□□□□ 0.17
APOC1-204ENST00000589078 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
APOC1-204ENST00000589078 ZCCHC11Q5TAX3 1644 aaKnown RBP16.11■□□□□ 0.17
APOC1-204ENST00000589078 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
APOC1-204ENST00000589078 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
APOC1-204ENST00000589078 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
APOC1-204ENST00000589078 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
APOC1-204ENST00000589078 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
APOC1-204ENST00000589078 KDM5BQ9UGL1 1544 aa16.08■□□□□ 0.16
APOC1-204ENST00000589078 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
APOC1-204ENST00000589078 KIAA0556O60303 1618 aa16.02■□□□□ 0.16
APOC1-204ENST00000589078 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
APOC1-204ENST00000589078 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
APOC1-204ENST00000589078 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
APOC1-204ENST00000589078 KIF21BO75037 1637 aa15.97■□□□□ 0.15
APOC1-204ENST00000589078 CFAP43Q8NDM7 1665 aa15.97■□□□□ 0.15
APOC1-204ENST00000589078 MAGI3Q5TCQ9 1506 aa15.93■□□□□ 0.14
APOC1-204ENST00000589078 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
APOC1-204ENST00000589078 CD109Q6YHK3 1445 aa15.91■□□□□ 0.14
APOC1-204ENST00000589078 ABCA8O94911 1581 aa15.88■□□□□ 0.13
APOC1-204ENST00000589078 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
APOC1-204ENST00000589078 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
APOC1-204ENST00000589078 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
APOC1-204ENST00000589078 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
APOC1-204ENST00000589078 ADAMTSL3P82987 1691 aa15.83■□□□□ 0.12
APOC1-204ENST00000589078 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
APOC1-204ENST00000589078 PTPRMP28827 1452 aa15.8■□□□□ 0.12
APOC1-204ENST00000589078 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
APOC1-204ENST00000589078 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
APOC1-204ENST00000589078 ABCA9Q8IUA7 1624 aa15.76■□□□□ 0.11
APOC1-204ENST00000589078 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
APOC1-204ENST00000589078 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
APOC1-204ENST00000589078 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
APOC1-204ENST00000589078 FRMPD1Q5SYB0 1578 aa15.74■□□□□ 0.11
APOC1-204ENST00000589078 LMTK3Q96Q04 1460 aa15.72■□□□□ 0.11
APOC1-204ENST00000589078 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
APOC1-204ENST00000589078 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
APOC1-204ENST00000589078 ATP10BO94823 1461 aa15.71■□□□□ 0.1
APOC1-204ENST00000589078 RIMS1Q86UR5 1692 aaKnown RBP15.7■□□□□ 0.1
APOC1-204ENST00000589078 RAPGEF3O95398 923 aa15.69■□□□□ 0.1
APOC1-204ENST00000589078 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
APOC1-204ENST00000589078 EFCAB5A4FU69 1503 aa15.68■□□□□ 0.1
APOC1-204ENST00000589078 NEO1Q92859 1461 aa15.68■□□□□ 0.1
APOC1-204ENST00000589078 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
APOC1-204ENST00000589078 SAMD9Q5K651 1589 aa15.67■□□□□ 0.1
APOC1-204ENST00000589078 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
APOC1-204ENST00000589078 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
APOC1-204ENST00000589078 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
APOC1-204ENST00000589078 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
APOC1-204ENST00000589078 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
APOC1-204ENST00000589078 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.09
APOC1-204ENST00000589078 FMN1Q68DA7 1419 aa15.58■□□□□ 0.08
APOC1-204ENST00000589078 HSPA2P54652 639 aa15.57■□□□□ 0.08
APOC1-204ENST00000589078 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
APOC1-204ENST00000589078 NUP153P49790 1475 aaKnown RBP15.57■□□□□ 0.08
APOC1-204ENST00000589078 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
APOC1-204ENST00000589078 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
APOC1-204ENST00000589078 ZMYM4Q5VZL5 1548 aa15.55■□□□□ 0.08
APOC1-204ENST00000589078 FANCAO15360 1455 aa15.55■□□□□ 0.08
APOC1-204ENST00000589078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
APOC1-204ENST00000589078 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
APOC1-204ENST00000589078 ZFYVE16Q7Z3T8 1539 aa15.54■□□□□ 0.08
APOC1-204ENST00000589078 CLIP1P30622 1438 aa15.54■□□□□ 0.08
APOC1-204ENST00000589078 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
APOC1-204ENST00000589078 TTC37Q6PGP7 1564 aa15.53■□□□□ 0.08
APOC1-204ENST00000589078 POGZQ7Z3K3 1410 aa15.52■□□□□ 0.08
APOC1-204ENST00000589078 AKNAQ7Z591 1439 aa15.52■□□□□ 0.08
APOC1-204ENST00000589078 CERKQ8TCT0 537 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms