RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
RETREG3-207ENST00000589007 PPRC1Q5VV67 1664 aaKnown RBP15.97■□□□□ 0.15
RETREG3-207ENST00000589007 TSPOAP1O95153 1857 aa15.93■□□□□ 0.14
RETREG3-207ENST00000589007 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
RETREG3-207ENST00000589007 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
RETREG3-207ENST00000589007 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
RETREG3-207ENST00000589007 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
RETREG3-207ENST00000589007 HECW2Q9P2P5 1572 aa15.85■□□□□ 0.13
RETREG3-207ENST00000589007 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
RETREG3-207ENST00000589007 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
RETREG3-207ENST00000589007 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
RETREG3-207ENST00000589007 GLI2P10070 1586 aa15.76■□□□□ 0.11
RETREG3-207ENST00000589007 COL17A1Q9UMD9 1497 aaPredicted RBP15.75■□□□□ 0.11
RETREG3-207ENST00000589007 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
RETREG3-207ENST00000589007 MAP3K4Q9Y6R4 1608 aa15.72■□□□□ 0.11
RETREG3-207ENST00000589007 CUL7Q14999 1698 aa15.71■□□□□ 0.11
RETREG3-207ENST00000589007 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
RETREG3-207ENST00000589007 KIAA0586Q9BVV6 1533 aa15.66■□□□□ 0.1
RETREG3-207ENST00000589007 ASXL2Q76L83 1435 aa15.6■□□□□ 0.09
RETREG3-207ENST00000589007 UHRF1BP1LA0JNW5 1464 aa15.59■□□□□ 0.09
RETREG3-207ENST00000589007 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.08
RETREG3-207ENST00000589007 ZCCHC11Q5TAX3 1644 aaKnown RBP15.57■□□□□ 0.08
RETREG3-207ENST00000589007 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
RETREG3-207ENST00000589007 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
RETREG3-207ENST00000589007 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
RETREG3-207ENST00000589007 KIF21BO75037 1637 aa15.53■□□□□ 0.08
RETREG3-207ENST00000589007 DISP1Q96F81 1524 aa15.52■□□□□ 0.07
RETREG3-207ENST00000589007 PTPRGP23470 1445 aa15.5■□□□□ 0.07
RETREG3-207ENST00000589007 IQGAP2Q13576 1575 aa15.49■□□□□ 0.07
RETREG3-207ENST00000589007 IGF1RP08069 1367 aa15.49■□□□□ 0.07
RETREG3-207ENST00000589007 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
RETREG3-207ENST00000589007 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.07
RETREG3-207ENST00000589007 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
RETREG3-207ENST00000589007 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
RETREG3-207ENST00000589007 UACAQ9BZF9 1416 aa15.44■□□□□ 0.06
RETREG3-207ENST00000589007 FBXO41Q8TF61 875 aa15.43■□□□□ 0.06
RETREG3-207ENST00000589007 KIAA0556O60303 1618 aa15.43■□□□□ 0.06
RETREG3-207ENST00000589007 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
RETREG3-207ENST00000589007 MAGI3Q5TCQ9 1506 aa15.4■□□□□ 0.06
RETREG3-207ENST00000589007 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
RETREG3-207ENST00000589007 CARMIL2Q6F5E8 1435 aa15.36■□□□□ 0.05
RETREG3-207ENST00000589007 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
RETREG3-207ENST00000589007 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
RETREG3-207ENST00000589007 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
RETREG3-207ENST00000589007 BCORL1Q5H9F3 1711 aa15.34■□□□□ 0.05
RETREG3-207ENST00000589007 PTPRMP28827 1452 aa15.33■□□□□ 0.05
RETREG3-207ENST00000589007 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.05
RETREG3-207ENST00000589007 ABCA8O94911 1581 aa15.33■□□□□ 0.05
RETREG3-207ENST00000589007 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
RETREG3-207ENST00000589007 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
RETREG3-207ENST00000589007 ARAP3Q8WWN8 1544 aa15.3■□□□□ 0.04
RETREG3-207ENST00000589007 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
RETREG3-207ENST00000589007 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
RETREG3-207ENST00000589007 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
RETREG3-207ENST00000589007 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
RETREG3-207ENST00000589007 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
RETREG3-207ENST00000589007 RIMS1Q86UR5 1692 aaKnown RBP15.23■□□□□ 0.03
RETREG3-207ENST00000589007 ARHGEF40Q8TER5 1519 aa15.2■□□□□ 0.02
RETREG3-207ENST00000589007 RICTORQ6R327 1708 aa15.18■□□□□ 0.02
RETREG3-207ENST00000589007 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
RETREG3-207ENST00000589007 ILDR2Q71H61 639 aa15.16■□□□□ 0.02
RETREG3-207ENST00000589007 RAPGEF2Q9Y4G8 1499 aa15.15■□□□□ 0.02
RETREG3-207ENST00000589007 STRCQ7RTU9 1775 aa15.1■□□□□ 0.01
RETREG3-207ENST00000589007 TTC37Q6PGP7 1564 aa15.09■□□□□ 0.01
RETREG3-207ENST00000589007 ATP10BO94823 1461 aa15.08■□□□□ 0.01
RETREG3-207ENST00000589007 NEO1Q92859 1461 aa15.08■□□□□ 0.01
RETREG3-207ENST00000589007 SPATA31D1Q6ZQQ2 1576 aa15.08■□□□□ 0
RETREG3-207ENST00000589007 FER1L4A9Z1Z3 1794 aa15.07■□□□□ 0
RETREG3-207ENST00000589007 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
RETREG3-207ENST00000589007 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
RETREG3-207ENST00000589007 SAMD9Q5K651 1589 aa15.04■□□□□ -0
RETREG3-207ENST00000589007 GOLGA3Q08378 1498 aa15.04■□□□□ -0
RETREG3-207ENST00000589007 SOCS7O14512 581 aa15.04■□□□□ -0
RETREG3-207ENST00000589007 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
RETREG3-207ENST00000589007 RAPGEF3O95398 923 aa15.01□□□□□ -0.01
RETREG3-207ENST00000589007 HSPA2P54652 639 aa15.01□□□□□ -0.01
RETREG3-207ENST00000589007 KCNH8Q96L42 1107 aa15.01□□□□□ -0.01
RETREG3-207ENST00000589007 RAPGEF6Q8TEU7 1601 aa15□□□□□ -0.01
RETREG3-207ENST00000589007 CERKQ8TCT0 537 aa15□□□□□ -0.01
RETREG3-207ENST00000589007 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
RETREG3-207ENST00000589007 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
RETREG3-207ENST00000589007 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
RETREG3-207ENST00000589007 YEATS2Q9ULM3 1422 aa14.96□□□□□ -0.01
RETREG3-207ENST00000589007 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.02
RETREG3-207ENST00000589007 CFAP74Q9C0B2 1584 aa14.95□□□□□ -0.02
RETREG3-207ENST00000589007 ZFYVE16Q7Z3T8 1539 aa14.95□□□□□ -0.02
RETREG3-207ENST00000589007 NUP153P49790 1475 aaKnown RBP14.95□□□□□ -0.02
RETREG3-207ENST00000589007 HECW1Q76N89 1606 aa14.94□□□□□ -0.02
RETREG3-207ENST00000589007 LTBP4Q8N2S1 1624 aa14.94□□□□□ -0.02
RETREG3-207ENST00000589007 FANCAO15360 1455 aa14.93□□□□□ -0.02
RETREG3-207ENST00000589007 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
RETREG3-207ENST00000589007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.92□□□□□ -0.02
RETREG3-207ENST00000589007 DENND4BO75064 1496 aaPredicted RBP14.9□□□□□ -0.02
RETREG3-207ENST00000589007 AKNAQ7Z591 1439 aa14.87□□□□□ -0.03
RETREG3-207ENST00000589007 ARID3CA6NKF2 412 aa14.86□□□□□ -0.03
RETREG3-207ENST00000589007 C3P01024 1663 aa14.86□□□□□ -0.03
RETREG3-207ENST00000589007 MAGI2Q86UL8 1455 aa14.85□□□□□ -0.03
RETREG3-207ENST00000589007 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.03
RETREG3-207ENST00000589007 IQSEC2Q5JU85 1478 aa14.82□□□□□ -0.04
RETREG3-207ENST00000589007 ARID4BQ4LE39 1312 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms