RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 FAM69CQ0P6D2 419 aa29.7■■■□□ 2.35
SEC11C-205ENST00000588875 NPM1P06748 294 aaKnown RBP eCLIP29.66■■■□□ 2.34
SEC11C-205ENST00000588875 ABCC10Q5T3U5 1492 aa29.66■■■□□ 2.34
SEC11C-205ENST00000588875 RUSC2Q8N2Y8 1516 aa29.66■■■□□ 2.34
SEC11C-205ENST00000588875 MAPKBP1O60336 1514 aa29.58■■■□□ 2.33
SEC11C-205ENST00000588875 IGF1RP08069 1367 aa29.55■■■□□ 2.32
SEC11C-205ENST00000588875 ADCY10Q96PN6 1610 aa29.55■■■□□ 2.32
SEC11C-205ENST00000588875 KIAA0586Q9BVV6 1533 aa29.53■■■□□ 2.32
SEC11C-205ENST00000588875 DIP2BQ9P265 1576 aa29.52■■■□□ 2.32
SEC11C-205ENST00000588875 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
SEC11C-205ENST00000588875 KDM4FA0A1W2PPD8 638 aa29.42■■■□□ 2.3
SEC11C-205ENST00000588875 PTPRGP23470 1445 aa29.37■■■□□ 2.29
SEC11C-205ENST00000588875 KDM6BO15054 1643 aa29.35■■■□□ 2.29
SEC11C-205ENST00000588875 TTBK1Q5TCY1 1321 aaPredicted RBP29.34■■■□□ 2.29
SEC11C-205ENST00000588875 CUL7Q14999 1698 aa29.34■■■□□ 2.29
SEC11C-205ENST00000588875 CARMIL1Q5VZK9 1371 aa29.3■■■□□ 2.28
SEC11C-205ENST00000588875 TSPOAP1O95153 1857 aa29.29■■■□□ 2.28
SEC11C-205ENST00000588875 TNIKQ9UKE5 1360 aa29.26■■■□□ 2.28
SEC11C-205ENST00000588875 ABCC2Q92887 1545 aa29.23■■■□□ 2.27
SEC11C-205ENST00000588875 CARMIL2Q6F5E8 1435 aa29.22■■■□□ 2.27
SEC11C-205ENST00000588875 ASXL2Q76L83 1435 aa29.2■■■□□ 2.27
SEC11C-205ENST00000588875 PLB1Q6P1J6 1458 aa29.16■■■□□ 2.26
SEC11C-205ENST00000588875 UHRF1BP1LA0JNW5 1464 aa29.13■■■□□ 2.25
SEC11C-205ENST00000588875 GLI2P10070 1586 aa29.12■■■□□ 2.25
SEC11C-205ENST00000588875 IQGAP2Q13576 1575 aa29.12■■■□□ 2.25
SEC11C-205ENST00000588875 UACAQ9BZF9 1416 aa29.11■■■□□ 2.25
SEC11C-205ENST00000588875 DISP1Q96F81 1524 aa29.1■■■□□ 2.25
SEC11C-205ENST00000588875 PPRC1Q5VV67 1664 aaKnown RBP29.09■■■□□ 2.25
SEC11C-205ENST00000588875 COL17A1Q9UMD9 1497 aaPredicted RBP29.05■■■□□ 2.24
SEC11C-205ENST00000588875 EPRSP07814 1512 aaKnown RBP29.01■■■□□ 2.23
SEC11C-205ENST00000588875 KDM5BQ9UGL1 1544 aa29.01■■■□□ 2.23
SEC11C-205ENST00000588875 ADGRL1O94910 1474 aa28.97■■■□□ 2.23
SEC11C-205ENST00000588875 UGGT2Q9NYU1 1516 aa28.96■■■□□ 2.23
SEC11C-205ENST00000588875 ILDR1Q86SU0 546 aaPredicted RBP28.95■■■□□ 2.22
SEC11C-205ENST00000588875 RAPGEF2Q9Y4G8 1499 aa28.95■■■□□ 2.22
SEC11C-205ENST00000588875 MAP3K4Q9Y6R4 1608 aa28.92■■■□□ 2.22
SEC11C-205ENST00000588875 ZCCHC11Q5TAX3 1644 aaKnown RBP28.89■■■□□ 2.22
SEC11C-205ENST00000588875 TEX14Q8IWB6 1497 aa28.88■■■□□ 2.21
SEC11C-205ENST00000588875 KIAA0556O60303 1618 aa28.87■■■□□ 2.21
SEC11C-205ENST00000588875 WDR7Q9Y4E6 1490 aa28.81■■■□□ 2.2
SEC11C-205ENST00000588875 KCNH8Q96L42 1107 aa28.74■■■□□ 2.19
SEC11C-205ENST00000588875 CD109Q6YHK3 1445 aa28.72■■■□□ 2.19
SEC11C-205ENST00000588875 HECW2Q9P2P5 1572 aa28.7■■■□□ 2.18
SEC11C-205ENST00000588875 MAGI3Q5TCQ9 1506 aa28.69■■■□□ 2.18
SEC11C-205ENST00000588875 ABCA8O94911 1581 aa28.67■■■□□ 2.18
SEC11C-205ENST00000588875 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
SEC11C-205ENST00000588875 CFAP43Q8NDM7 1665 aa28.61■■■□□ 2.17
SEC11C-205ENST00000588875 CTTNBP2Q8WZ74 1663 aa28.61■■■□□ 2.17
SEC11C-205ENST00000588875 PRXQ9BXM0 1461 aa28.57■■■□□ 2.16
SEC11C-205ENST00000588875 ARID3CA6NKF2 412 aa28.54■■■□□ 2.16
SEC11C-205ENST00000588875 P3H3Q8IVL6 736 aa28.51■■■□□ 2.15
SEC11C-205ENST00000588875 ATP10BO94823 1461 aa28.49■■■□□ 2.15
SEC11C-205ENST00000588875 ARAP3Q8WWN8 1544 aa28.48■■■□□ 2.15
SEC11C-205ENST00000588875 KIF21BO75037 1637 aa28.44■■■□□ 2.14
SEC11C-205ENST00000588875 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
SEC11C-205ENST00000588875 RAPGEF3O95398 923 aa28.38■■■□□ 2.13
SEC11C-205ENST00000588875 PHLDB1Q86UU1 1377 aa28.37■■■□□ 2.13
SEC11C-205ENST00000588875 ABCA9Q8IUA7 1624 aa28.34■■■□□ 2.13
SEC11C-205ENST00000588875 PTPRMP28827 1452 aa28.31■■■□□ 2.12
SEC11C-205ENST00000588875 CSRNP3Q8WYN3 585 aa28.29■■■□□ 2.12
SEC11C-205ENST00000588875 NEO1Q92859 1461 aa28.27■■■□□ 2.12
SEC11C-205ENST00000588875 ADAMTSL3P82987 1691 aa28.27■■■□□ 2.12
SEC11C-205ENST00000588875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
SEC11C-205ENST00000588875 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
SEC11C-205ENST00000588875 SAMD9Q5K651 1589 aa28.26■■■□□ 2.11
SEC11C-205ENST00000588875 FBXO41Q8TF61 875 aa28.25■■■□□ 2.11
SEC11C-205ENST00000588875 RAPGEF6Q8TEU7 1601 aa28.23■■■□□ 2.11
SEC11C-205ENST00000588875 ARID4BQ4LE39 1312 aaPredicted RBP28.2■■■□□ 2.11
SEC11C-205ENST00000588875 FRMPD1Q5SYB0 1578 aa28.2■■■□□ 2.11
SEC11C-205ENST00000588875 NUP153P49790 1475 aaKnown RBP28.2■■■□□ 2.1
SEC11C-205ENST00000588875 RANGAP1P46060 587 aaPredicted RBP28.17■■■□□ 2.1
SEC11C-205ENST00000588875 BCORL1Q5H9F3 1711 aa28.15■■■□□ 2.1
SEC11C-205ENST00000588875 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
SEC11C-205ENST00000588875 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
SEC11C-205ENST00000588875 MADDQ8WXG6 1647 aa28.12■■■□□ 2.09
SEC11C-205ENST00000588875 DENND4BO75064 1496 aaPredicted RBP28.09■■■□□ 2.09
SEC11C-205ENST00000588875 LMTK3Q96Q04 1460 aa28.08■■■□□ 2.09
SEC11C-205ENST00000588875 AKNAQ7Z591 1439 aa28.08■■■□□ 2.09
SEC11C-205ENST00000588875 PCF11O94913 1555 aaKnown RBP28.07■■■□□ 2.08
SEC11C-205ENST00000588875 ARHGEF40Q8TER5 1519 aa28.03■■■□□ 2.08
SEC11C-205ENST00000588875 FANCAO15360 1455 aa28.02■■■□□ 2.08
SEC11C-205ENST00000588875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.01■■■□□ 2.07
SEC11C-205ENST00000588875 RICTORQ6R327 1708 aa28.01■■■□□ 2.07
SEC11C-205ENST00000588875 HSPA2P54652 639 aa27.99■■■□□ 2.07
SEC11C-205ENST00000588875 RIMS1Q86UR5 1692 aaKnown RBP27.98■■■□□ 2.07
SEC11C-205ENST00000588875 EEA1Q15075 1411 aa27.98■■■□□ 2.07
SEC11C-205ENST00000588875 PLPPR3Q6T4P5 718 aa27.97■■■□□ 2.07
SEC11C-205ENST00000588875 YEATS2Q9ULM3 1422 aa27.97■■■□□ 2.07
SEC11C-205ENST00000588875 TTC37Q6PGP7 1564 aa27.94■■■□□ 2.06
SEC11C-205ENST00000588875 ZMYM4Q5VZL5 1548 aa27.92■■■□□ 2.06
SEC11C-205ENST00000588875 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
SEC11C-205ENST00000588875 CFAP74Q9C0B2 1584 aa27.91■■■□□ 2.06
SEC11C-205ENST00000588875 MLECQ14165 292 aa27.91■■■□□ 2.06
SEC11C-205ENST00000588875 SIGLEC1Q9BZZ2 1709 aa27.9■■■□□ 2.06
SEC11C-205ENST00000588875 ZFYVE16Q7Z3T8 1539 aa27.9■■■□□ 2.06
SEC11C-205ENST00000588875 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.05
SEC11C-205ENST00000588875 CDK13Q14004 1512 aaKnown RBP27.88■■■□□ 2.05
SEC11C-205ENST00000588875 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
SEC11C-205ENST00000588875 SCAPERQ9BY12 1400 aa27.87■■■□□ 2.05
SEC11C-205ENST00000588875 PLCH2O75038 1416 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms