RNA–Protein interactions for RNA: ENST00000588609.1

LINC00906-203, long intergenic non-protein coding RNA 906, humanhuman

TSL 3

Gene LINC00906, Length 314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-203ENST00000588609 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
LINC00906-203ENST00000588609 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
LINC00906-203ENST00000588609 ERICH3Q5RHP9 1530 aa10.54□□□□□ -0.72
LINC00906-203ENST00000588609 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
LINC00906-203ENST00000588609 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
LINC00906-203ENST00000588609 FHAD1B1AJZ9 1412 aa10.52□□□□□ -0.73
LINC00906-203ENST00000588609 GRIN2AQ12879 1464 aa10.52□□□□□ -0.73
LINC00906-203ENST00000588609 RUSC2Q8N2Y8 1516 aa10.52□□□□□ -0.73
LINC00906-203ENST00000588609 IGF1RP08069 1367 aa10.52□□□□□ -0.73
LINC00906-203ENST00000588609 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
LINC00906-203ENST00000588609 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
LINC00906-203ENST00000588609 CEP170Q5SW79 1584 aa10.49□□□□□ -0.73
LINC00906-203ENST00000588609 NUP160Q12769 1436 aa10.48□□□□□ -0.73
LINC00906-203ENST00000588609 RIMBP3CA6NJZ7 1639 aa10.47□□□□□ -0.73
LINC00906-203ENST00000588609 RIMBP3BA6NNM3 1639 aa10.47□□□□□ -0.73
LINC00906-203ENST00000588609 RIMBP3Q9UFD9 1639 aa10.47□□□□□ -0.73
LINC00906-203ENST00000588609 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
LINC00906-203ENST00000588609 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
LINC00906-203ENST00000588609 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
LINC00906-203ENST00000588609 CUL7Q14999 1698 aa10.43□□□□□ -0.74
LINC00906-203ENST00000588609 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
LINC00906-203ENST00000588609 ZBTB22O15209 634 aa10.41□□□□□ -0.74
LINC00906-203ENST00000588609 CYB5RLQ6IPT4 315 aa10.4□□□□□ -0.74
LINC00906-203ENST00000588609 FAM9AQ8IZU1 332 aaPredicted RBP10.39□□□□□ -0.75
LINC00906-203ENST00000588609 RAPGEF2Q9Y4G8 1499 aa10.37□□□□□ -0.75
LINC00906-203ENST00000588609 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
LINC00906-203ENST00000588609 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
LINC00906-203ENST00000588609 KIAA0586Q9BVV6 1533 aa10.36□□□□□ -0.75
LINC00906-203ENST00000588609 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
LINC00906-203ENST00000588609 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
LINC00906-203ENST00000588609 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
LINC00906-203ENST00000588609 EEA1Q15075 1411 aa10.3□□□□□ -0.76
LINC00906-203ENST00000588609 TTBK1Q5TCY1 1321 aaPredicted RBP10.28□□□□□ -0.76
LINC00906-203ENST00000588609 DISP1Q96F81 1524 aa10.27□□□□□ -0.77
LINC00906-203ENST00000588609 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
LINC00906-203ENST00000588609 UGGT2Q9NYU1 1516 aa10.25□□□□□ -0.77
LINC00906-203ENST00000588609 CTTNBP2Q8WZ74 1663 aa10.23□□□□□ -0.77
LINC00906-203ENST00000588609 FOXD4L1Q9NU39 408 aa10.23□□□□□ -0.77
LINC00906-203ENST00000588609 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
LINC00906-203ENST00000588609 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
LINC00906-203ENST00000588609 KIF21BO75037 1637 aa10.22□□□□□ -0.77
LINC00906-203ENST00000588609 RANGAP1P46060 587 aaPredicted RBP10.22□□□□□ -0.77
LINC00906-203ENST00000588609 PTPRGP23470 1445 aa10.22□□□□□ -0.77
LINC00906-203ENST00000588609 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.78
LINC00906-203ENST00000588609 P3H3Q8IVL6 736 aa10.2□□□□□ -0.78
LINC00906-203ENST00000588609 ADCY10Q96PN6 1610 aa10.2□□□□□ -0.78
LINC00906-203ENST00000588609 GOLGA3Q08378 1498 aa10.18□□□□□ -0.78
LINC00906-203ENST00000588609 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
LINC00906-203ENST00000588609 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
LINC00906-203ENST00000588609 PLB1Q6P1J6 1458 aa10.16□□□□□ -0.78
LINC00906-203ENST00000588609 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.79
LINC00906-203ENST00000588609 UACAQ9BZF9 1416 aa10.15□□□□□ -0.79
LINC00906-203ENST00000588609 SAMD9Q5K651 1589 aa10.14□□□□□ -0.79
LINC00906-203ENST00000588609 ABCC2Q92887 1545 aa10.13□□□□□ -0.79
LINC00906-203ENST00000588609 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
LINC00906-203ENST00000588609 UHRF1BP1LA0JNW5 1464 aa10.11□□□□□ -0.79
LINC00906-203ENST00000588609 ABCA8O94911 1581 aa10.11□□□□□ -0.79
LINC00906-203ENST00000588609 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00906-203ENST00000588609 MAPKBP1O60336 1514 aa10.1□□□□□ -0.79
LINC00906-203ENST00000588609 KDM5BQ9UGL1 1544 aa10.09□□□□□ -0.79
LINC00906-203ENST00000588609 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
LINC00906-203ENST00000588609 ASXL2Q76L83 1435 aa10.08□□□□□ -0.8
LINC00906-203ENST00000588609 EFCAB5A4FU69 1503 aa10.07□□□□□ -0.8
LINC00906-203ENST00000588609 DCAF8L1A6NGE4 600 aa10.07□□□□□ -0.8
LINC00906-203ENST00000588609 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
LINC00906-203ENST00000588609 DIP2BQ9P265 1576 aa10.06□□□□□ -0.8
LINC00906-203ENST00000588609 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
LINC00906-203ENST00000588609 FAM69CQ0P6D2 419 aa10.06□□□□□ -0.8
LINC00906-203ENST00000588609 LOC105371045A0A1W2PR82 267 aa10.05□□□□□ -0.8
LINC00906-203ENST00000588609 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
LINC00906-203ENST00000588609 ATP10BO94823 1461 aa10.04□□□□□ -0.8
LINC00906-203ENST00000588609 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
LINC00906-203ENST00000588609 KIF13AQ9H1H9 1805 aa10.03□□□□□ -0.8
LINC00906-203ENST00000588609 CLIP1P30622 1438 aa10.02□□□□□ -0.81
LINC00906-203ENST00000588609 WDR7Q9Y4E6 1490 aa10.02□□□□□ -0.81
LINC00906-203ENST00000588609 EPRSP07814 1512 aaKnown RBP10.01□□□□□ -0.81
LINC00906-203ENST00000588609 CDK13Q14004 1512 aaKnown RBP10□□□□□ -0.81
LINC00906-203ENST00000588609 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
LINC00906-203ENST00000588609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
LINC00906-203ENST00000588609 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
LINC00906-203ENST00000588609 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
LINC00906-203ENST00000588609 ATP1B4Q9UN42 357 aaPredicted RBP9.99□□□□□ -0.81
LINC00906-203ENST00000588609 FMN1Q68DA7 1419 aa9.99□□□□□ -0.81
LINC00906-203ENST00000588609 PCF11O94913 1555 aaKnown RBP9.97□□□□□ -0.81
LINC00906-203ENST00000588609 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
LINC00906-203ENST00000588609 GLI2P10070 1586 aa9.97□□□□□ -0.81
LINC00906-203ENST00000588609 POTEDQ86YR6 584 aa9.96□□□□□ -0.82
LINC00906-203ENST00000588609 HECW1Q76N89 1606 aa9.95□□□□□ -0.82
LINC00906-203ENST00000588609 PPRC1Q5VV67 1664 aaKnown RBP9.94□□□□□ -0.82
LINC00906-203ENST00000588609 TSPOAP1O95153 1857 aa9.93□□□□□ -0.82
LINC00906-203ENST00000588609 MAP3K4Q9Y6R4 1608 aa9.93□□□□□ -0.82
LINC00906-203ENST00000588609 CASKIN1Q8WXD9 1431 aa9.93□□□□□ -0.82
LINC00906-203ENST00000588609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00906-203ENST00000588609 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
LINC00906-203ENST00000588609 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
LINC00906-203ENST00000588609 LRRIQ1Q96JM4 1722 aa9.91□□□□□ -0.82
LINC00906-203ENST00000588609 FYCO1Q9BQS8 1478 aa9.91□□□□□ -0.82
LINC00906-203ENST00000588609 COL17A1Q9UMD9 1497 aaPredicted RBP9.91□□□□□ -0.82
LINC00906-203ENST00000588609 PLEKHD1A6NEE1 506 aa9.9□□□□□ -0.82
LINC00906-203ENST00000588609 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms