RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 PPARGC1BQ86YN6 1023 aaKnown RBP25.74■■□□□ 1.71
NFIX-210ENST00000588228 CTTNBP2Q8WZ74 1663 aa25.74■■□□□ 1.71
NFIX-210ENST00000588228 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
NFIX-210ENST00000588228 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
NFIX-210ENST00000588228 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
NFIX-210ENST00000588228 APLP2Q06481 763 aa25.65■■□□□ 1.7
NFIX-210ENST00000588228 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
NFIX-210ENST00000588228 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
NFIX-210ENST00000588228 SAMD9Q5K651 1589 aa25.54■■□□□ 1.68
NFIX-210ENST00000588228 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
NFIX-210ENST00000588228 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
NFIX-210ENST00000588228 IQGAP2Q13576 1575 aa25.52■■□□□ 1.68
NFIX-210ENST00000588228 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
NFIX-210ENST00000588228 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
NFIX-210ENST00000588228 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
NFIX-210ENST00000588228 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
NFIX-210ENST00000588228 MAP3K1Q13233 1512 aa25.46■■□□□ 1.67
NFIX-210ENST00000588228 UGGT2Q9NYU1 1516 aa25.42■■□□□ 1.66
NFIX-210ENST00000588228 PCF11O94913 1555 aaKnown RBP25.41■■□□□ 1.66
NFIX-210ENST00000588228 FYCO1Q9BQS8 1478 aa25.41■■□□□ 1.66
NFIX-210ENST00000588228 CASKIN1Q8WXD9 1431 aa25.41■■□□□ 1.66
NFIX-210ENST00000588228 NUP160Q12769 1436 aa25.38■■□□□ 1.65
NFIX-210ENST00000588228 KANK4Q5T7N3 995 aaPredicted RBP25.38■■□□□ 1.65
NFIX-210ENST00000588228 TIAM1Q13009 1591 aa25.37■■□□□ 1.65
NFIX-210ENST00000588228 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
NFIX-210ENST00000588228 FBLN2P98095 1184 aa25.36■■□□□ 1.65
NFIX-210ENST00000588228 CFAP43Q8NDM7 1665 aa25.29■■□□□ 1.64
NFIX-210ENST00000588228 HRCP23327 699 aa25.29■■□□□ 1.64
NFIX-210ENST00000588228 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
NFIX-210ENST00000588228 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
NFIX-210ENST00000588228 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
NFIX-210ENST00000588228 ATP1B4Q9UN42 357 aaPredicted RBP25.26■■□□□ 1.63
NFIX-210ENST00000588228 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
NFIX-210ENST00000588228 CARMIL2Q6F5E8 1435 aa25.16■■□□□ 1.62
NFIX-210ENST00000588228 RRBP1Q9P2E9 1410 aaKnown RBP25.16■■□□□ 1.62
NFIX-210ENST00000588228 HECW1Q76N89 1606 aa25.15■■□□□ 1.62
NFIX-210ENST00000588228 CHD1O14646 1710 aa25.15■■□□□ 1.62
NFIX-210ENST00000588228 CCDC18Q5T9S5 1454 aa25.14■■□□□ 1.62
NFIX-210ENST00000588228 LRRIQ1Q96JM4 1722 aa25.09■■□□□ 1.61
NFIX-210ENST00000588228 MTUS2Q5JR59 1369 aa25.06■■□□□ 1.6
NFIX-210ENST00000588228 CCNB3Q8WWL7 1395 aa25.06■■□□□ 1.6
NFIX-210ENST00000588228 EPRSP07814 1512 aaKnown RBP25.06■■□□□ 1.6
NFIX-210ENST00000588228 PHLDB1Q86UU1 1377 aa25.04■■□□□ 1.6
NFIX-210ENST00000588228 RAPGEF6Q8TEU7 1601 aa25.02■■□□□ 1.6
NFIX-210ENST00000588228 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
NFIX-210ENST00000588228 HNRNPUL2Q1KMD3 747 aaKnown RBP25.02■■□□□ 1.6
NFIX-210ENST00000588228 PRG4Q92954 1404 aaPredicted RBP25■■□□□ 1.59
NFIX-210ENST00000588228 NUP153P49790 1475 aaKnown RBP24.98■■□□□ 1.59
NFIX-210ENST00000588228 SHROOM2Q13796 1616 aa24.98■■□□□ 1.59
NFIX-210ENST00000588228 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
NFIX-210ENST00000588228 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
NFIX-210ENST00000588228 MAGI3Q5TCQ9 1506 aa24.95■■□□□ 1.58
NFIX-210ENST00000588228 PLB1Q6P1J6 1458 aa24.94■■□□□ 1.58
NFIX-210ENST00000588228 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
NFIX-210ENST00000588228 NCOA2Q15596 1464 aa24.92■■□□□ 1.58
NFIX-210ENST00000588228 SUPT6HQ7KZ85 1726 aaKnown RBP24.92■■□□□ 1.58
NFIX-210ENST00000588228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.91■■□□□ 1.58
NFIX-210ENST00000588228 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
NFIX-210ENST00000588228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.89■■□□□ 1.58
NFIX-210ENST00000588228 ABCA8O94911 1581 aa24.89■■□□□ 1.58
NFIX-210ENST00000588228 PTPRGP23470 1445 aa24.88■■□□□ 1.57
NFIX-210ENST00000588228 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
NFIX-210ENST00000588228 FGD6Q6ZV73 1430 aa24.87■■□□□ 1.57
NFIX-210ENST00000588228 ARID3CA6NKF2 412 aa24.86■■□□□ 1.57
NFIX-210ENST00000588228 CDK11AQ9UQ88 783 aaPredicted RBP24.85■■□□□ 1.57
NFIX-210ENST00000588228 MYOM3Q5VTT5 1437 aa24.85■■□□□ 1.57
NFIX-210ENST00000588228 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
NFIX-210ENST00000588228 ERCC6L2Q5T890 1561 aa24.77■■□□□ 1.56
NFIX-210ENST00000588228 TROQ12816 1431 aaPredicted RBP24.77■■□□□ 1.56
NFIX-210ENST00000588228 ITGAEP38570 1179 aa24.75■■□□□ 1.55
NFIX-210ENST00000588228 UACAQ9BZF9 1416 aa24.74■■□□□ 1.55
NFIX-210ENST00000588228 ATP10BO94823 1461 aa24.74■■□□□ 1.55
NFIX-210ENST00000588228 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
NFIX-210ENST00000588228 TCOF1Q13428 1488 aaKnown RBP24.7■■□□□ 1.54
NFIX-210ENST00000588228 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
NFIX-210ENST00000588228 ADCY10Q96PN6 1610 aa24.67■■□□□ 1.54
NFIX-210ENST00000588228 PLEKHD1A6NEE1 506 aa24.66■■□□□ 1.54
NFIX-210ENST00000588228 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
NFIX-210ENST00000588228 OSCARQ8IYS5 282 aa24.64■■□□□ 1.53
NFIX-210ENST00000588228 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
NFIX-210ENST00000588228 UHRF1BP1LA0JNW5 1464 aa24.6■■□□□ 1.53
NFIX-210ENST00000588228 RAB3GAP2Q9H2M9 1393 aa24.59■■□□□ 1.53
NFIX-210ENST00000588228 KIF14Q15058 1648 aa24.59■■□□□ 1.53
NFIX-210ENST00000588228 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
NFIX-210ENST00000588228 PTPRKQ15262 1439 aa24.57■■□□□ 1.52
NFIX-210ENST00000588228 GPATCH8Q9UKJ3 1502 aaKnown RBP24.55■■□□□ 1.52
NFIX-210ENST00000588228 ITSN2Q9NZM3 1697 aa24.55■■□□□ 1.52
NFIX-210ENST00000588228 CLSPNQ9HAW4 1339 aa24.55■■□□□ 1.52
NFIX-210ENST00000588228 ABCC10Q5T3U5 1492 aa24.54■■□□□ 1.52
NFIX-210ENST00000588228 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
NFIX-210ENST00000588228 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
NFIX-210ENST00000588228 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
NFIX-210ENST00000588228 AKNAQ7Z591 1439 aa24.46■■□□□ 1.51
NFIX-210ENST00000588228 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
NFIX-210ENST00000588228 DAPK1P53355 1430 aa24.44■■□□□ 1.5
NFIX-210ENST00000588228 ZCCHC11Q5TAX3 1644 aaKnown RBP24.44■■□□□ 1.5
NFIX-210ENST00000588228 NAIPQ13075 1403 aa24.44■■□□□ 1.5
NFIX-210ENST00000588228 ZNF644Q9H582 1327 aaPredicted RBP24.44■■□□□ 1.5
NFIX-210ENST00000588228 DNMT1P26358 1616 aaKnown RBP24.43■■□□□ 1.5
NFIX-210ENST00000588228 ABCC5O15440 1437 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms