RNA–Protein interactions for RNA: ENST00000588195.5

PCSK4-207, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 1,806 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-207ENST00000588195 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
PCSK4-207ENST00000588195 ADAMTS12P58397 1594 aa31.33■■■□□ 2.61
PCSK4-207ENST00000588195 AQRO60306 1485 aaKnown RBP eCLIP31.32■■■□□ 2.65e-8■■■■□ 21.5
PCSK4-207ENST00000588195 MAP3K1Q13233 1512 aa31.28■■■□□ 2.6
PCSK4-207ENST00000588195 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
PCSK4-207ENST00000588195 FHAD1B1AJZ9 1412 aa31.27■■■□□ 2.6
PCSK4-207ENST00000588195 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
PCSK4-207ENST00000588195 PCF11O94913 1555 aaKnown RBP31.25■■■□□ 2.59
PCSK4-207ENST00000588195 TIAM1Q13009 1591 aa31.25■■■□□ 2.59
PCSK4-207ENST00000588195 KANK4Q5T7N3 995 aaPredicted RBP31.24■■■□□ 2.59
PCSK4-207ENST00000588195 SAMD9Q5K651 1589 aa31.24■■■□□ 2.59
PCSK4-207ENST00000588195 FHOD3Q2V2M9 1422 aa31.22■■■□□ 2.59
PCSK4-207ENST00000588195 CFAP43Q8NDM7 1665 aa31.21■■■□□ 2.59
PCSK4-207ENST00000588195 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.58
PCSK4-207ENST00000588195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.17■■■□□ 2.58
PCSK4-207ENST00000588195 P3H3Q8IVL6 736 aa31.14■■■□□ 2.58
PCSK4-207ENST00000588195 FYCO1Q9BQS8 1478 aa31.14■■■□□ 2.58
PCSK4-207ENST00000588195 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
PCSK4-207ENST00000588195 CCER1Q8TC90 406 aaPredicted RBP31.08■■■□□ 2.57
PCSK4-207ENST00000588195 FMN1Q68DA7 1419 aa31.07■■■□□ 2.56
PCSK4-207ENST00000588195 RRBP1Q9P2E9 1410 aaKnown RBP31.07■■■□□ 2.56
PCSK4-207ENST00000588195 IQGAP2Q13576 1575 aa31.07■■■□□ 2.56
PCSK4-207ENST00000588195 LRRC9Q6ZRR7 1453 aa31.06■■■□□ 2.56
PCSK4-207ENST00000588195 SNAPC4Q5SXM2 1469 aa31.05■■■□□ 2.56
PCSK4-207ENST00000588195 HNRNPUL2Q1KMD3 747 aaKnown RBP31.02■■■□□ 2.56
PCSK4-207ENST00000588195 MAGI1Q96QZ7 1491 aaPredicted RBP30.96■■■□□ 2.55
PCSK4-207ENST00000588195 LRRIQ1Q96JM4 1722 aa30.95■■■□□ 2.55
PCSK4-207ENST00000588195 GRIN2AQ12879 1464 aa30.93■■■□□ 2.54
PCSK4-207ENST00000588195 UGGT2Q9NYU1 1516 aa30.91■■■□□ 2.54
PCSK4-207ENST00000588195 CCNB3Q8WWL7 1395 aa30.9■■■□□ 2.54
PCSK4-207ENST00000588195 KIAA0586Q9BVV6 1533 aa30.86■■■□□ 2.53
PCSK4-207ENST00000588195 ATP1B4Q9UN42 357 aaPredicted RBP30.86■■■□□ 2.53
PCSK4-207ENST00000588195 SYNJ2O15056 1496 aa30.84■■■□□ 2.53
PCSK4-207ENST00000588195 PHLDB1Q86UU1 1377 aa30.8■■■□□ 2.52
PCSK4-207ENST00000588195 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
PCSK4-207ENST00000588195 CEP170Q5SW79 1584 aa30.77■■■□□ 2.52
PCSK4-207ENST00000588195 HECW1Q76N89 1606 aa30.76■■■□□ 2.52
PCSK4-207ENST00000588195 DISP1Q96F81 1524 aa30.72■■■□□ 2.51
PCSK4-207ENST00000588195 CCDC18Q5T9S5 1454 aa30.71■■■□□ 2.51
PCSK4-207ENST00000588195 EHBP1L1Q8N3D4 1523 aa30.68■■■□□ 2.5
PCSK4-207ENST00000588195 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
PCSK4-207ENST00000588195 NUP160Q12769 1436 aa30.67■■■□□ 2.5
PCSK4-207ENST00000588195 MTUS2Q5JR59 1369 aa30.65■■■□□ 2.5
PCSK4-207ENST00000588195 SUPT6HQ7KZ85 1726 aaKnown RBP30.65■■■□□ 2.5
PCSK4-207ENST00000588195 EPRSP07814 1512 aaKnown RBP30.6■■■□□ 2.49
PCSK4-207ENST00000588195 MAGI3Q5TCQ9 1506 aa30.6■■■□□ 2.49
PCSK4-207ENST00000588195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.58■■■□□ 2.49
PCSK4-207ENST00000588195 NCOA2Q15596 1464 aa30.57■■■□□ 2.48
PCSK4-207ENST00000588195 FGD6Q6ZV73 1430 aa30.55■■■□□ 2.48
PCSK4-207ENST00000588195 FBLN2P98095 1184 aa30.54■■■□□ 2.48
PCSK4-207ENST00000588195 ARHGEF11O15085 1522 aa30.54■■■□□ 2.48
PCSK4-207ENST00000588195 RAPGEF6Q8TEU7 1601 aa30.54■■■□□ 2.48
PCSK4-207ENST00000588195 DHX57Q6P158 1386 aaKnown RBP30.53■■■□□ 2.48
PCSK4-207ENST00000588195 CDK13Q14004 1512 aaKnown RBP30.53■■■□□ 2.48
PCSK4-207ENST00000588195 ITGAEP38570 1179 aa30.52■■■□□ 2.48
PCSK4-207ENST00000588195 FAM50AQ14320 339 aaKnown RBP30.5■■■□□ 2.47
PCSK4-207ENST00000588195 MYOM3Q5VTT5 1437 aa30.47■■■□□ 2.47
PCSK4-207ENST00000588195 CHD1O14646 1710 aa30.47■■■□□ 2.47
PCSK4-207ENST00000588195 CLSPNQ9HAW4 1339 aa30.46■■■□□ 2.47
PCSK4-207ENST00000588195 NUP153P49790 1475 aaKnown RBP30.45■■■□□ 2.46
PCSK4-207ENST00000588195 CARMIL2Q6F5E8 1435 aa30.42■■■□□ 2.46
PCSK4-207ENST00000588195 RAB3GAP2Q9H2M9 1393 aa30.42■■■□□ 2.46
PCSK4-207ENST00000588195 JPH4Q96JJ6 628 aa30.4■■■□□ 2.46
PCSK4-207ENST00000588195 SETD5Q9C0A6 1442 aa30.4■■■□□ 2.46
PCSK4-207ENST00000588195 PTPN23Q9H3S7 1636 aa30.39■■■□□ 2.46
PCSK4-207ENST00000588195 TCOF1Q13428 1488 aaKnown RBP30.31■■■□□ 2.44
PCSK4-207ENST00000588195 PLB1Q6P1J6 1458 aa30.31■■■□□ 2.44
PCSK4-207ENST00000588195 ARID3CA6NKF2 412 aa30.29■■■□□ 2.44
PCSK4-207ENST00000588195 ABCA8O94911 1581 aa30.27■■■□□ 2.44
PCSK4-207ENST00000588195 PTPRKQ15262 1439 aa30.25■■■□□ 2.43
PCSK4-207ENST00000588195 SHROOM2Q13796 1616 aa30.24■■■□□ 2.43
PCSK4-207ENST00000588195 MIA2Q96PC5 1412 aa30.24■■■□□ 2.43
PCSK4-207ENST00000588195 MAPKBP1O60336 1514 aa30.22■■■□□ 2.43
PCSK4-207ENST00000588195 ADCY10Q96PN6 1610 aa30.2■■■□□ 2.43
PCSK4-207ENST00000588195 PRG4Q92954 1404 aaPredicted RBP30.19■■■□□ 2.42
PCSK4-207ENST00000588195 CDK11AQ9UQ88 783 aaPredicted RBP30.17■■■□□ 2.42
PCSK4-207ENST00000588195 HFM1A2PYH4 1435 aa30.17■■■□□ 2.42
PCSK4-207ENST00000588195 TROQ12816 1431 aaPredicted RBP30.17■■■□□ 2.42
PCSK4-207ENST00000588195 GCC2Q8IWJ2 1684 aa30.12■■■□□ 2.41
PCSK4-207ENST00000588195 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
PCSK4-207ENST00000588195 KIF14Q15058 1648 aa30.09■■■□□ 2.41
PCSK4-207ENST00000588195 NAIPQ13075 1403 aa30.09■■■□□ 2.41
PCSK4-207ENST00000588195 ZNF316A6NFI3 1004 aaPredicted RBP30.06■■■□□ 2.4
PCSK4-207ENST00000588195 ATP10BO94823 1461 aa30.05■■■□□ 2.4
PCSK4-207ENST00000588195 PTPRGP23470 1445 aa30.05■■■□□ 2.4
PCSK4-207ENST00000588195 AKNAQ7Z591 1439 aa30.04■■■□□ 2.4
PCSK4-207ENST00000588195 CLASP1Q7Z460 1538 aa30.04■■■□□ 2.4
PCSK4-207ENST00000588195 DNMT1P26358 1616 aaKnown RBP30.03■■■□□ 2.4
PCSK4-207ENST00000588195 ERCC6L2Q5T890 1561 aa29.97■■■□□ 2.39
PCSK4-207ENST00000588195 UACAQ9BZF9 1416 aa29.97■■■□□ 2.39
PCSK4-207ENST00000588195 GPATCH8Q9UKJ3 1502 aaKnown RBP29.96■■■□□ 2.39
PCSK4-207ENST00000588195 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
PCSK4-207ENST00000588195 DAPK1P53355 1430 aa29.95■■■□□ 2.39
PCSK4-207ENST00000588195 DIEXFQ68CQ4 756 aaKnown RBP29.92■■■□□ 2.38
PCSK4-207ENST00000588195 CAMSAP2Q08AD1 1489 aa29.92■■■□□ 2.38
PCSK4-207ENST00000588195 ABCC10Q5T3U5 1492 aa29.92■■■□□ 2.38
PCSK4-207ENST00000588195 ABCC5O15440 1437 aa29.9■■■□□ 2.38
PCSK4-207ENST00000588195 PLEKHD1A6NEE1 506 aa29.9■■■□□ 2.38
PCSK4-207ENST00000588195 CHIC2Q9UKJ5 165 aa29.89■■■□□ 2.38
PCSK4-207ENST00000588195 KDM6BO15054 1643 aa29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms