RNA–Protein interactions for RNA: ENST00000587597.5

RTN2-204, Transcript of reticulon 2, humanhuman

TSL 5

Gene RTN2, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-204ENST00000587597 EIF4G3O43432 1585 aaKnown RBP38.29■■■■□ 3.72
RTN2-204ENST00000587597 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
RTN2-204ENST00000587597 CTTNBP2Q8WZ74 1663 aa38.21■■■■□ 3.71
RTN2-204ENST00000587597 FHAD1B1AJZ9 1412 aa38.2■■■■□ 3.71
RTN2-204ENST00000587597 SNAPC4Q5SXM2 1469 aa38.13■■■■□ 3.69
RTN2-204ENST00000587597 P3H3Q8IVL6 736 aa38.11■■■■□ 3.69
RTN2-204ENST00000587597 FHOD3Q2V2M9 1422 aa37.96■■■■□ 3.67
RTN2-204ENST00000587597 APLP2Q06481 763 aa37.95■■■■□ 3.67
RTN2-204ENST00000587597 MAGI1Q96QZ7 1491 aaPredicted RBP37.92■■■■□ 3.66
RTN2-204ENST00000587597 EFCAB5A4FU69 1503 aa37.9■■■■□ 3.66
RTN2-204ENST00000587597 GRIN2AQ12879 1464 aa37.89■■■■□ 3.66
RTN2-204ENST00000587597 FBLN2P98095 1184 aa37.84■■■■□ 3.65
RTN2-204ENST00000587597 KANK4Q5T7N3 995 aaPredicted RBP37.83■■■■□ 3.65
RTN2-204ENST00000587597 CHMP7Q8WUX9 453 aaPredicted RBP37.83■■■■□ 3.65
RTN2-204ENST00000587597 SAMD9Q5K651 1589 aa37.83■■■■□ 3.65
RTN2-204ENST00000587597 SYNJ2O15056 1496 aa37.82■■■■□ 3.65
RTN2-204ENST00000587597 IQGAP2Q13576 1575 aa37.82■■■■□ 3.64
RTN2-204ENST00000587597 PCF11O94913 1555 aaKnown RBP37.75■■■■□ 3.63
RTN2-204ENST00000587597 CEP170Q5SW79 1584 aa37.7■■■■□ 3.63
RTN2-204ENST00000587597 KIAA0586Q9BVV6 1533 aa37.7■■■■□ 3.62
RTN2-204ENST00000587597 ATP1B4Q9UN42 357 aaPredicted RBP37.67■■■■□ 3.62
RTN2-204ENST00000587597 UGGT2Q9NYU1 1516 aa37.6■■■■□ 3.61
RTN2-204ENST00000587597 TIAM1Q13009 1591 aa37.6■■■■□ 3.61
RTN2-204ENST00000587597 FMN1Q68DA7 1419 aa37.6■■■■□ 3.61
RTN2-204ENST00000587597 CASKIN1Q8WXD9 1431 aa37.59■■■■□ 3.61
RTN2-204ENST00000587597 ZEB1P37275 1124 aaPredicted RBP37.57■■■■□ 3.61
RTN2-204ENST00000587597 NUP160Q12769 1436 aa37.57■■■■□ 3.61
RTN2-204ENST00000587597 FYCO1Q9BQS8 1478 aa37.56■■■■□ 3.6
RTN2-204ENST00000587597 DISP1Q96F81 1524 aa37.52■■■■□ 3.6
RTN2-204ENST00000587597 MAP3K1Q13233 1512 aa37.51■■■■□ 3.6
RTN2-204ENST00000587597 CFAP43Q8NDM7 1665 aa37.47■■■■□ 3.59
RTN2-204ENST00000587597 CHD1O14646 1710 aa37.47■■■■□ 3.59
RTN2-204ENST00000587597 LRRIQ1Q96JM4 1722 aa37.45■■■■□ 3.59
RTN2-204ENST00000587597 KIAA0556O60303 1618 aa37.45■■■■□ 3.59
RTN2-204ENST00000587597 LRRC9Q6ZRR7 1453 aa37.45■■■■□ 3.59
RTN2-204ENST00000587597 JPH4Q96JJ6 628 aa37.4■■■■□ 3.58
RTN2-204ENST00000587597 HNRNPUL2Q1KMD3 747 aaKnown RBP37.3■■■■□ 3.56
RTN2-204ENST00000587597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.3■■■■□ 3.56
RTN2-204ENST00000587597 ARID3CA6NKF2 412 aa37.24■■■■□ 3.55
RTN2-204ENST00000587597 CCER1Q8TC90 406 aaPredicted RBP37.23■■■■□ 3.55
RTN2-204ENST00000587597 PHLDB1Q86UU1 1377 aa37.22■■■■□ 3.55
RTN2-204ENST00000587597 RRBP1Q9P2E9 1410 aaKnown RBP37.22■■■■□ 3.55
RTN2-204ENST00000587597 PELP1Q8IZL8 1130 aaKnown RBP37.21■■■■□ 3.55
RTN2-204ENST00000587597 HECW1Q76N89 1606 aa37.2■■■■□ 3.55
RTN2-204ENST00000587597 CARMIL2Q6F5E8 1435 aa37.17■■■■□ 3.54
RTN2-204ENST00000587597 EPRSP07814 1512 aaKnown RBP37.16■■■■□ 3.54
RTN2-204ENST00000587597 CDK13Q14004 1512 aaKnown RBP37.16■■■■□ 3.54
RTN2-204ENST00000587597 MTUS2Q5JR59 1369 aa37.14■■■■□ 3.54
RTN2-204ENST00000587597 MAGI3Q5TCQ9 1506 aa37.14■■■■□ 3.54
RTN2-204ENST00000587597 CCNB3Q8WWL7 1395 aa37.13■■■■□ 3.53
RTN2-204ENST00000587597 PRG4Q92954 1404 aaPredicted RBP37.12■■■■□ 3.53
RTN2-204ENST00000587597 PLB1Q6P1J6 1458 aa37.11■■■■□ 3.53
RTN2-204ENST00000587597 CCDC18Q5T9S5 1454 aa37.1■■■■□ 3.53
RTN2-204ENST00000587597 RAPGEF6Q8TEU7 1601 aa37.1■■■■□ 3.53
RTN2-204ENST00000587597 NUP153P49790 1475 aaKnown RBP37.09■■■■□ 3.53
RTN2-204ENST00000587597 SHROOM2Q13796 1616 aa37.02■■■■□ 3.52
RTN2-204ENST00000587597 EHBP1L1Q8N3D4 1523 aa36.99■■■■□ 3.51
RTN2-204ENST00000587597 ERCC6L2Q5T890 1561 aa36.98■■■■□ 3.51
RTN2-204ENST00000587597 ITGAEP38570 1179 aa36.97■■■■□ 3.51
RTN2-204ENST00000587597 NCOA2Q15596 1464 aa36.97■■■■□ 3.51
RTN2-204ENST00000587597 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.51
RTN2-204ENST00000587597 SUPT6HQ7KZ85 1726 aaKnown RBP36.92■■■■□ 3.5
RTN2-204ENST00000587597 FAM50AQ14320 339 aaKnown RBP36.91■■■■□ 3.5
RTN2-204ENST00000587597 ABCA8O94911 1581 aa36.89■■■■□ 3.5
RTN2-204ENST00000587597 PTPRGP23470 1445 aa36.88■■■■□ 3.49
RTN2-204ENST00000587597 ARHGEF11O15085 1522 aa36.86■■■■□ 3.49
RTN2-204ENST00000587597 FGD6Q6ZV73 1430 aa36.84■■■■□ 3.49
RTN2-204ENST00000587597 MYOM3Q5VTT5 1437 aa36.79■■■■□ 3.48
RTN2-204ENST00000587597 ATP10BO94823 1461 aa36.73■■■■□ 3.47
RTN2-204ENST00000587597 CDK11AQ9UQ88 783 aaPredicted RBP36.7■■■■□ 3.47
RTN2-204ENST00000587597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.66■■■■□ 3.46
RTN2-204ENST00000587597 TROQ12816 1431 aaPredicted RBP36.66■■■■□ 3.46
RTN2-204ENST00000587597 UACAQ9BZF9 1416 aa36.65■■■■□ 3.46
RTN2-204ENST00000587597 PTPN23Q9H3S7 1636 aa36.63■■■■□ 3.45
RTN2-204ENST00000587597 KIF14Q15058 1648 aa36.61■■■■□ 3.45
RTN2-204ENST00000587597 PTPRKQ15262 1439 aa36.58■■■■□ 3.45
RTN2-204ENST00000587597 OSCARQ8IYS5 282 aa36.57■■■■□ 3.44
RTN2-204ENST00000587597 PLEKHD1A6NEE1 506 aa36.55■■■■□ 3.44
RTN2-204ENST00000587597 RAB3GAP2Q9H2M9 1393 aa36.51■■■■□ 3.44
RTN2-204ENST00000587597 ABCC2Q92887 1545 aa36.51■■■■□ 3.43
RTN2-204ENST00000587597 TCOF1Q13428 1488 aaKnown RBP36.51■■■■□ 3.43
RTN2-204ENST00000587597 ADCY10Q96PN6 1610 aa36.5■■■■□ 3.43
RTN2-204ENST00000587597 MIA2Q96PC5 1412 aa36.49■■■■□ 3.43
RTN2-204ENST00000587597 DHX57Q6P158 1386 aaKnown RBP36.47■■■■□ 3.43
RTN2-204ENST00000587597 ZNF644Q9H582 1327 aaPredicted RBP36.46■■■■□ 3.43
RTN2-204ENST00000587597 SETD5Q9C0A6 1442 aa36.46■■■■□ 3.43
RTN2-204ENST00000587597 GPATCH8Q9UKJ3 1502 aaKnown RBP36.42■■■■□ 3.42
RTN2-204ENST00000587597 CLSPNQ9HAW4 1339 aa36.42■■■■□ 3.42
RTN2-204ENST00000587597 ABCC10Q5T3U5 1492 aa36.38■■■■□ 3.41
RTN2-204ENST00000587597 CHIC2Q9UKJ5 165 aa36.35■■■■□ 3.41
RTN2-204ENST00000587597 CFDP1Q9UEE9 299 aaPredicted RBP36.34■■■■□ 3.41
RTN2-204ENST00000587597 UHRF1BP1LA0JNW5 1464 aa36.33■■■■□ 3.41
RTN2-204ENST00000587597 CDC42BPAQ5VT25 1732 aa36.32■■■■□ 3.4
RTN2-204ENST00000587597 ZCCHC11Q5TAX3 1644 aaKnown RBP36.32■■■■□ 3.4
RTN2-204ENST00000587597 ITSN2Q9NZM3 1697 aa36.31■■■■□ 3.4
RTN2-204ENST00000587597 SCAF1Q9H7N4 1312 aaKnown RBP36.3■■■■□ 3.4
RTN2-204ENST00000587597 ZNF777Q9ULD5 760 aaPredicted RBP36.3■■■■□ 3.4
RTN2-204ENST00000587597 KDM5BQ9UGL1 1544 aa36.28■■■■□ 3.4
RTN2-204ENST00000587597 HFM1A2PYH4 1435 aa36.26■■■■□ 3.4
RTN2-204ENST00000587597 CAMSAP2Q08AD1 1489 aa36.25■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms