RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 JPH4Q96JJ6 628 aa15.47■□□□□ 0.07
SDF2-204ENST00000587338 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
SDF2-204ENST00000587338 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
SDF2-204ENST00000587338 MAPKBP1O60336 1514 aa15.43■□□□□ 0.06
SDF2-204ENST00000587338 DIP2BQ9P265 1576 aa15.43■□□□□ 0.06
SDF2-204ENST00000587338 RUSC2Q8N2Y8 1516 aa15.43■□□□□ 0.06
SDF2-204ENST00000587338 ADCY10Q96PN6 1610 aa15.4■□□□□ 0.06
SDF2-204ENST00000587338 KDM6BO15054 1643 aa15.39■□□□□ 0.05
SDF2-204ENST00000587338 KDM4FA0A1W2PPD8 638 aa15.39■□□□□ 0.05
SDF2-204ENST00000587338 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
SDF2-204ENST00000587338 TSPOAP1O95153 1857 aa15.34■□□□□ 0.05
SDF2-204ENST00000587338 ILDR1Q86SU0 546 aaPredicted RBP15.3■□□□□ 0.04
SDF2-204ENST00000587338 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
SDF2-204ENST00000587338 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.04
SDF2-204ENST00000587338 PTPRGP23470 1445 aa15.24■□□□□ 0.03
SDF2-204ENST00000587338 IGF1RP08069 1367 aa15.22■□□□□ 0.03
SDF2-204ENST00000587338 CUL7Q14999 1698 aa15.22■□□□□ 0.03
SDF2-204ENST00000587338 ABCC2Q92887 1545 aa15.21■□□□□ 0.03
SDF2-204ENST00000587338 ADGRL1O94910 1474 aa15.2■□□□□ 0.02
SDF2-204ENST00000587338 ASXL2Q76L83 1435 aa15.2■□□□□ 0.02
SDF2-204ENST00000587338 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
SDF2-204ENST00000587338 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
SDF2-204ENST00000587338 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
SDF2-204ENST00000587338 PPRC1Q5VV67 1664 aaKnown RBP15.18■□□□□ 0.02
SDF2-204ENST00000587338 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
SDF2-204ENST00000587338 GLI2P10070 1586 aa15.15■□□□□ 0.02
SDF2-204ENST00000587338 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
SDF2-204ENST00000587338 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
SDF2-204ENST00000587338 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
SDF2-204ENST00000587338 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
SDF2-204ENST00000587338 COL17A1Q9UMD9 1497 aaPredicted RBP15.11■□□□□ 0.01
SDF2-204ENST00000587338 HECW2Q9P2P5 1572 aa15.11■□□□□ 0.01
SDF2-204ENST00000587338 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
SDF2-204ENST00000587338 TEX14Q8IWB6 1497 aa15.08■□□□□ 0.01
SDF2-204ENST00000587338 MAP3K4Q9Y6R4 1608 aa15.07■□□□□ 0
SDF2-204ENST00000587338 DISP1Q96F81 1524 aa15.07■□□□□ 0
SDF2-204ENST00000587338 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
SDF2-204ENST00000587338 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
SDF2-204ENST00000587338 WDR7Q9Y4E6 1490 aa14.99□□□□□ -0.01
SDF2-204ENST00000587338 KIAA0556O60303 1618 aa14.99□□□□□ -0.01
SDF2-204ENST00000587338 UGGT2Q9NYU1 1516 aa14.98□□□□□ -0.01
SDF2-204ENST00000587338 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
SDF2-204ENST00000587338 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
SDF2-204ENST00000587338 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
SDF2-204ENST00000587338 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
SDF2-204ENST00000587338 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
SDF2-204ENST00000587338 KIF21BO75037 1637 aa14.9□□□□□ -0.02
SDF2-204ENST00000587338 FBXO41Q8TF61 875 aa14.87□□□□□ -0.03
SDF2-204ENST00000587338 ABCA8O94911 1581 aa14.85□□□□□ -0.03
SDF2-204ENST00000587338 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
SDF2-204ENST00000587338 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
SDF2-204ENST00000587338 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
SDF2-204ENST00000587338 ARAP3Q8WWN8 1544 aa14.81□□□□□ -0.04
SDF2-204ENST00000587338 PTPRMP28827 1452 aa14.8□□□□□ -0.04
SDF2-204ENST00000587338 ADAMTSL3P82987 1691 aa14.77□□□□□ -0.05
SDF2-204ENST00000587338 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
SDF2-204ENST00000587338 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
SDF2-204ENST00000587338 ARID4BQ4LE39 1312 aaPredicted RBP14.73□□□□□ -0.05
SDF2-204ENST00000587338 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
SDF2-204ENST00000587338 ATP10BO94823 1461 aa14.73□□□□□ -0.05
SDF2-204ENST00000587338 ABCA9Q8IUA7 1624 aa14.73□□□□□ -0.05
SDF2-204ENST00000587338 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
SDF2-204ENST00000587338 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
SDF2-204ENST00000587338 MADDQ8WXG6 1647 aa14.71□□□□□ -0.05
SDF2-204ENST00000587338 BCORL1Q5H9F3 1711 aa14.7□□□□□ -0.06
SDF2-204ENST00000587338 NEO1Q92859 1461 aa14.69□□□□□ -0.06
SDF2-204ENST00000587338 LMTK3Q96Q04 1460 aa14.69□□□□□ -0.06
SDF2-204ENST00000587338 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
SDF2-204ENST00000587338 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
SDF2-204ENST00000587338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
SDF2-204ENST00000587338 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
SDF2-204ENST00000587338 RIMS1Q86UR5 1692 aaKnown RBP14.65□□□□□ -0.06
SDF2-204ENST00000587338 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
SDF2-204ENST00000587338 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
SDF2-204ENST00000587338 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
SDF2-204ENST00000587338 HSPA2P54652 639 aa14.63□□□□□ -0.07
SDF2-204ENST00000587338 DENND4BO75064 1496 aaPredicted RBP14.61□□□□□ -0.07
SDF2-204ENST00000587338 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
SDF2-204ENST00000587338 NUP153P49790 1475 aaKnown RBP14.58□□□□□ -0.08
SDF2-204ENST00000587338 RICTORQ6R327 1708 aa14.58□□□□□ -0.08
SDF2-204ENST00000587338 POGZQ7Z3K3 1410 aa14.58□□□□□ -0.08
SDF2-204ENST00000587338 FANCAO15360 1455 aa14.57□□□□□ -0.08
SDF2-204ENST00000587338 FHOD3Q2V2M9 1422 aa14.57□□□□□ -0.08
SDF2-204ENST00000587338 AKNAQ7Z591 1439 aa14.57□□□□□ -0.08
SDF2-204ENST00000587338 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
SDF2-204ENST00000587338 CERKQ8TCT0 537 aa14.56□□□□□ -0.08
SDF2-204ENST00000587338 ZFYVE16Q7Z3T8 1539 aa14.55□□□□□ -0.08
SDF2-204ENST00000587338 CFAP74Q9C0B2 1584 aa14.55□□□□□ -0.08
SDF2-204ENST00000587338 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
SDF2-204ENST00000587338 MLECQ14165 292 aa14.54□□□□□ -0.08
SDF2-204ENST00000587338 YEATS2Q9ULM3 1422 aa14.54□□□□□ -0.08
SDF2-204ENST00000587338 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
SDF2-204ENST00000587338 SIGLEC1Q9BZZ2 1709 aa14.52□□□□□ -0.08
SDF2-204ENST00000587338 EFCAB5A4FU69 1503 aa14.52□□□□□ -0.08
SDF2-204ENST00000587338 TTC37Q6PGP7 1564 aa14.51□□□□□ -0.09
SDF2-204ENST00000587338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
SDF2-204ENST00000587338 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
SDF2-204ENST00000587338 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
SDF2-204ENST00000587338 MAGI2Q86UL8 1455 aa14.49□□□□□ -0.09
SDF2-204ENST00000587338 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms