RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 JPH4Q96JJ6 628 aa26.66■■□□□ 1.86
RANBP3-208ENST00000587263 NPM1P06748 294 aaKnown RBP eCLIP26.64■■□□□ 1.86
RANBP3-208ENST00000587263 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
RANBP3-208ENST00000587263 DIP2BQ9P265 1576 aa26.59■■□□□ 1.85
RANBP3-208ENST00000587263 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
RANBP3-208ENST00000587263 KDM6BO15054 1643 aa26.54■■□□□ 1.84
RANBP3-208ENST00000587263 ADCY10Q96PN6 1610 aa26.51■■□□□ 1.83
RANBP3-208ENST00000587263 KDM4FA0A1W2PPD8 638 aa26.48■■□□□ 1.83
RANBP3-208ENST00000587263 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
RANBP3-208ENST00000587263 KIAA0586Q9BVV6 1533 aa26.39■■□□□ 1.81
RANBP3-208ENST00000587263 TSPOAP1O95153 1857 aa26.36■■□□□ 1.81
RANBP3-208ENST00000587263 ILDR1Q86SU0 546 aaPredicted RBP26.31■■□□□ 1.8
RANBP3-208ENST00000587263 CUL7Q14999 1698 aa26.25■■□□□ 1.79
RANBP3-208ENST00000587263 PTPRGP23470 1445 aa26.25■■□□□ 1.79
RANBP3-208ENST00000587263 IGF1RP08069 1367 aa26.22■■□□□ 1.79
RANBP3-208ENST00000587263 ABCC2Q92887 1545 aa26.21■■□□□ 1.79
RANBP3-208ENST00000587263 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
RANBP3-208ENST00000587263 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
RANBP3-208ENST00000587263 GLI2P10070 1586 aa26.18■■□□□ 1.78
RANBP3-208ENST00000587263 ADGRL1O94910 1474 aa26.17■■□□□ 1.78
RANBP3-208ENST00000587263 CARMIL2Q6F5E8 1435 aa26.17■■□□□ 1.78
RANBP3-208ENST00000587263 ASXL2Q76L83 1435 aa26.17■■□□□ 1.78
RANBP3-208ENST00000587263 TNIKQ9UKE5 1360 aa26.17■■□□□ 1.78
RANBP3-208ENST00000587263 PPRC1Q5VV67 1664 aaKnown RBP26.14■■□□□ 1.78
RANBP3-208ENST00000587263 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.77
RANBP3-208ENST00000587263 UHRF1BP1LA0JNW5 1464 aa26.1■■□□□ 1.77
RANBP3-208ENST00000587263 CARMIL1Q5VZK9 1371 aa26.05■■□□□ 1.76
RANBP3-208ENST00000587263 IQGAP2Q13576 1575 aa26.04■■□□□ 1.76
RANBP3-208ENST00000587263 UACAQ9BZF9 1416 aa26.04■■□□□ 1.76
RANBP3-208ENST00000587263 TEX14Q8IWB6 1497 aa26.02■■□□□ 1.76
RANBP3-208ENST00000587263 EPRSP07814 1512 aaKnown RBP26.01■■□□□ 1.75
RANBP3-208ENST00000587263 HECW2Q9P2P5 1572 aa26.01■■□□□ 1.75
RANBP3-208ENST00000587263 COL17A1Q9UMD9 1497 aaPredicted RBP26.01■■□□□ 1.75
RANBP3-208ENST00000587263 MAP3K4Q9Y6R4 1608 aa25.99■■□□□ 1.75
RANBP3-208ENST00000587263 KDM5BQ9UGL1 1544 aa25.97■■□□□ 1.75
RANBP3-208ENST00000587263 DISP1Q96F81 1524 aa25.94■■□□□ 1.74
RANBP3-208ENST00000587263 ZCCHC11Q5TAX3 1644 aaKnown RBP25.9■■□□□ 1.74
RANBP3-208ENST00000587263 UGGT2Q9NYU1 1516 aa25.86■■□□□ 1.73
RANBP3-208ENST00000587263 WDR7Q9Y4E6 1490 aa25.83■■□□□ 1.73
RANBP3-208ENST00000587263 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
RANBP3-208ENST00000587263 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
RANBP3-208ENST00000587263 MAGI3Q5TCQ9 1506 aa25.75■■□□□ 1.71
RANBP3-208ENST00000587263 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
RANBP3-208ENST00000587263 CD109Q6YHK3 1445 aa25.72■■□□□ 1.71
RANBP3-208ENST00000587263 FBXO41Q8TF61 875 aa25.65■■□□□ 1.7
RANBP3-208ENST00000587263 KIF21BO75037 1637 aa25.63■■□□□ 1.69
RANBP3-208ENST00000587263 GOLGA3Q08378 1498 aa25.62■■□□□ 1.69
RANBP3-208ENST00000587263 KCNH8Q96L42 1107 aa25.62■■□□□ 1.69
RANBP3-208ENST00000587263 ABCA8O94911 1581 aa25.61■■□□□ 1.69
RANBP3-208ENST00000587263 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.68
RANBP3-208ENST00000587263 ARAP3Q8WWN8 1544 aa25.56■■□□□ 1.68
RANBP3-208ENST00000587263 PTPRMP28827 1452 aa25.49■■□□□ 1.67
RANBP3-208ENST00000587263 PHLDB1Q86UU1 1377 aa25.47■■□□□ 1.67
RANBP3-208ENST00000587263 ADAMTSL3P82987 1691 aa25.46■■□□□ 1.67
RANBP3-208ENST00000587263 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
RANBP3-208ENST00000587263 ABCA9Q8IUA7 1624 aa25.41■■□□□ 1.66
RANBP3-208ENST00000587263 ATP10BO94823 1461 aa25.38■■□□□ 1.65
RANBP3-208ENST00000587263 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
RANBP3-208ENST00000587263 NEO1Q92859 1461 aa25.37■■□□□ 1.65
RANBP3-208ENST00000587263 ARID3CA6NKF2 412 aa25.35■■□□□ 1.65
RANBP3-208ENST00000587263 BCORL1Q5H9F3 1711 aa25.34■■□□□ 1.65
RANBP3-208ENST00000587263 RAPGEF3O95398 923 aa25.34■■□□□ 1.65
RANBP3-208ENST00000587263 MADDQ8WXG6 1647 aa25.33■■□□□ 1.65
RANBP3-208ENST00000587263 PRXQ9BXM0 1461 aa25.33■■□□□ 1.65
RANBP3-208ENST00000587263 LMTK3Q96Q04 1460 aa25.32■■□□□ 1.64
RANBP3-208ENST00000587263 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
RANBP3-208ENST00000587263 FRMPD1Q5SYB0 1578 aa25.28■■□□□ 1.64
RANBP3-208ENST00000587263 P3H3Q8IVL6 736 aa25.25■■□□□ 1.63
RANBP3-208ENST00000587263 ARHGEF40Q8TER5 1519 aa25.23■■□□□ 1.63
RANBP3-208ENST00000587263 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
RANBP3-208ENST00000587263 RIMS1Q86UR5 1692 aaKnown RBP25.21■■□□□ 1.63
RANBP3-208ENST00000587263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.62
RANBP3-208ENST00000587263 HNRNPUL2Q1KMD3 747 aaKnown RBP25.2■■□□□ 1.62
RANBP3-208ENST00000587263 SAMD9Q5K651 1589 aa25.18■■□□□ 1.62
RANBP3-208ENST00000587263 DENND4BO75064 1496 aaPredicted RBP25.17■■□□□ 1.62
RANBP3-208ENST00000587263 POGZQ7Z3K3 1410 aa25.14■■□□□ 1.62
RANBP3-208ENST00000587263 RICTORQ6R327 1708 aa25.13■■□□□ 1.61
RANBP3-208ENST00000587263 HSPA2P54652 639 aa25.13■■□□□ 1.61
RANBP3-208ENST00000587263 FANCAO15360 1455 aa25.13■■□□□ 1.61
RANBP3-208ENST00000587263 FHOD3Q2V2M9 1422 aa25.12■■□□□ 1.61
RANBP3-208ENST00000587263 CFAP74Q9C0B2 1584 aa25.12■■□□□ 1.61
RANBP3-208ENST00000587263 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
RANBP3-208ENST00000587263 AKNAQ7Z591 1439 aa25.11■■□□□ 1.61
RANBP3-208ENST00000587263 ZMYM4Q5VZL5 1548 aa25.08■■□□□ 1.61
RANBP3-208ENST00000587263 CERKQ8TCT0 537 aa25.08■■□□□ 1.61
RANBP3-208ENST00000587263 EFCAB5A4FU69 1503 aa25.07■■□□□ 1.6
RANBP3-208ENST00000587263 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
RANBP3-208ENST00000587263 PLEKHD1A6NEE1 506 aa25.05■■□□□ 1.6
RANBP3-208ENST00000587263 ZFYVE16Q7Z3T8 1539 aa25.05■■□□□ 1.6
RANBP3-208ENST00000587263 MAGI2Q86UL8 1455 aa25.02■■□□□ 1.6
RANBP3-208ENST00000587263 YEATS2Q9ULM3 1422 aa25.01■■□□□ 1.59
RANBP3-208ENST00000587263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.01■■□□□ 1.597e-8■□□□□ 9
RANBP3-208ENST00000587263 TTC37Q6PGP7 1564 aa24.99■■□□□ 1.59
RANBP3-208ENST00000587263 FER1L4A9Z1Z3 1794 aa24.98■■□□□ 1.59
RANBP3-208ENST00000587263 SIGLEC1Q9BZZ2 1709 aa24.98■■□□□ 1.59
RANBP3-208ENST00000587263 MLECQ14165 292 aa24.96■■□□□ 1.59
RANBP3-208ENST00000587263 CSRNP3Q8WYN3 585 aa24.96■■□□□ 1.59
RANBP3-208ENST00000587263 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
RANBP3-208ENST00000587263 PREX1Q8TCU6 1659 aa24.9■■□□□ 1.58
RANBP3-208ENST00000587263 ARHGEF12Q9NZN5 1544 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms