RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ERCC6L2Q5T890 1561 aa28.95■■■□□ 2.22
DNMT1-212ENST00000587197 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
DNMT1-212ENST00000587197 CARMIL1Q5VZK9 1371 aa28.93■■■□□ 2.22
DNMT1-212ENST00000587197 PRG4Q92954 1404 aaPredicted RBP28.92■■■□□ 2.22
DNMT1-212ENST00000587197 KIAA0586Q9BVV6 1533 aa28.88■■■□□ 2.21
DNMT1-212ENST00000587197 EEA1Q15075 1411 aa28.86■■■□□ 2.21
DNMT1-212ENST00000587197 CSRNP3Q8WYN3 585 aa28.76■■■□□ 2.19
DNMT1-212ENST00000587197 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
DNMT1-212ENST00000587197 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
DNMT1-212ENST00000587197 CARMIL2Q6F5E8 1435 aa28.64■■■□□ 2.18
DNMT1-212ENST00000587197 IQGAP2Q13576 1575 aa28.63■■■□□ 2.17
DNMT1-212ENST00000587197 NPM1P06748 294 aaKnown RBP eCLIP28.63■■■□□ 2.17
DNMT1-212ENST00000587197 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
DNMT1-212ENST00000587197 PTPRGP23470 1445 aa28.56■■■□□ 2.16
DNMT1-212ENST00000587197 TNIKQ9UKE5 1360 aa28.54■■■□□ 2.16
DNMT1-212ENST00000587197 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
DNMT1-212ENST00000587197 ADCY10Q96PN6 1610 aa28.47■■■□□ 2.15
DNMT1-212ENST00000587197 UGGT2Q9NYU1 1516 aa28.47■■■□□ 2.15
DNMT1-212ENST00000587197 KIF21BO75037 1637 aa28.45■■■□□ 2.14
DNMT1-212ENST00000587197 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
DNMT1-212ENST00000587197 DISP1Q96F81 1524 aa28.43■■■□□ 2.14
DNMT1-212ENST00000587197 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
DNMT1-212ENST00000587197 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
DNMT1-212ENST00000587197 ABCC10Q5T3U5 1492 aa28.35■■■□□ 2.13
DNMT1-212ENST00000587197 FAM69CQ0P6D2 419 aa28.35■■■□□ 2.13
DNMT1-212ENST00000587197 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
DNMT1-212ENST00000587197 UACAQ9BZF9 1416 aa28.34■■■□□ 2.13
DNMT1-212ENST00000587197 KIF13AQ9H1H9 1805 aa28.33■■■□□ 2.13
DNMT1-212ENST00000587197 ABCC2Q92887 1545 aa28.33■■■□□ 2.13
DNMT1-212ENST00000587197 UHRF1BP1LA0JNW5 1464 aa28.32■■■□□ 2.12
DNMT1-212ENST00000587197 DIP2BQ9P265 1576 aa28.24■■■□□ 2.11
DNMT1-212ENST00000587197 UBTFP17480 764 aaKnown RBP28.23■■■□□ 2.11
DNMT1-212ENST00000587197 PLB1Q6P1J6 1458 aa28.21■■■□□ 2.11
DNMT1-212ENST00000587197 KDM5BQ9UGL1 1544 aa28.18■■■□□ 2.1
DNMT1-212ENST00000587197 ASXL2Q76L83 1435 aa28.18■■■□□ 2.1
DNMT1-212ENST00000587197 EHMT2Q96KQ7 1210 aa28.14■■■□□ 2.1
DNMT1-212ENST00000587197 ZCCHC11Q5TAX3 1644 aaKnown RBP28.08■■■□□ 2.09
DNMT1-212ENST00000587197 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
DNMT1-212ENST00000587197 ABCA8O94911 1581 aa28.07■■■□□ 2.08
DNMT1-212ENST00000587197 GLI2P10070 1586 aa28.06■■■□□ 2.08
DNMT1-212ENST00000587197 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
DNMT1-212ENST00000587197 TSPOAP1O95153 1857 aa28.02■■■□□ 2.08
DNMT1-212ENST00000587197 EFCAB5A4FU69 1503 aa28.01■■■□□ 2.07
DNMT1-212ENST00000587197 EPRSP07814 1512 aaKnown RBP28■■■□□ 2.07
DNMT1-212ENST00000587197 RANGAP1P46060 587 aaPredicted RBP27.98■■■□□ 2.07
DNMT1-212ENST00000587197 WDR7Q9Y4E6 1490 aa27.97■■■□□ 2.07
DNMT1-212ENST00000587197 KDM6BO15054 1643 aa27.95■■■□□ 2.06
DNMT1-212ENST00000587197 LOC105371045A0A1W2PR82 267 aa27.91■■■□□ 2.06
DNMT1-212ENST00000587197 ARHGAP35Q9NRY4 1499 aa27.9■■■□□ 2.06
DNMT1-212ENST00000587197 FHOD3Q2V2M9 1422 aa27.89■■■□□ 2.06
DNMT1-212ENST00000587197 MAP3K4Q9Y6R4 1608 aa27.88■■■□□ 2.05
DNMT1-212ENST00000587197 TEX14Q8IWB6 1497 aa27.88■■■□□ 2.05
DNMT1-212ENST00000587197 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
DNMT1-212ENST00000587197 RAPGEF6Q8TEU7 1601 aa27.86■■■□□ 2.05
DNMT1-212ENST00000587197 ATP10BO94823 1461 aa27.85■■■□□ 2.05
DNMT1-212ENST00000587197 ARID3CA6NKF2 412 aa27.85■■■□□ 2.05
DNMT1-212ENST00000587197 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
DNMT1-212ENST00000587197 PPRC1Q5VV67 1664 aaKnown RBP27.84■■■□□ 2.05
DNMT1-212ENST00000587197 CLIP1P30622 1438 aa27.83■■■□□ 2.05
DNMT1-212ENST00000587197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
DNMT1-212ENST00000587197 HNRNPUL2Q1KMD3 747 aaKnown RBP27.82■■■□□ 2.04
DNMT1-212ENST00000587197 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
DNMT1-212ENST00000587197 CFAP43Q8NDM7 1665 aa27.78■■■□□ 2.04
DNMT1-212ENST00000587197 FMN1Q68DA7 1419 aa27.77■■■□□ 2.04
DNMT1-212ENST00000587197 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
DNMT1-212ENST00000587197 MAGI3Q5TCQ9 1506 aa27.73■■■□□ 2.03
DNMT1-212ENST00000587197 NUP153P49790 1475 aaKnown RBP27.73■■■□□ 2.03
DNMT1-212ENST00000587197 PLEKHD1A6NEE1 506 aa27.68■■■□□ 2.02
DNMT1-212ENST00000587197 COL17A1Q9UMD9 1497 aaPredicted RBP27.64■■■□□ 2.01
DNMT1-212ENST00000587197 ABCA9Q8IUA7 1624 aa27.62■■■□□ 2.01
DNMT1-212ENST00000587197 CASKIN1Q8WXD9 1431 aa27.58■■■□□ 2.01
DNMT1-212ENST00000587197 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
DNMT1-212ENST00000587197 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
DNMT1-212ENST00000587197 HECW1Q76N89 1606 aa27.54■■■□□ 2
DNMT1-212ENST00000587197 CDK11AQ9UQ88 783 aaPredicted RBP27.51■■□□□ 1.99
DNMT1-212ENST00000587197 ARAP3Q8WWN8 1544 aa27.51■■□□□ 1.99
DNMT1-212ENST00000587197 FYCO1Q9BQS8 1478 aa27.51■■□□□ 1.99
DNMT1-212ENST00000587197 CDK13Q14004 1512 aaKnown RBP27.49■■□□□ 1.99
DNMT1-212ENST00000587197 NEO1Q92859 1461 aa27.49■■□□□ 1.99
DNMT1-212ENST00000587197 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
DNMT1-212ENST00000587197 KDM4FA0A1W2PPD8 638 aa27.45■■□□□ 1.98
DNMT1-212ENST00000587197 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
DNMT1-212ENST00000587197 CCDC18Q5T9S5 1454 aa27.43■■□□□ 1.98
DNMT1-212ENST00000587197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.41■■□□□ 1.98
DNMT1-212ENST00000587197 CFAP74Q9C0B2 1584 aa27.37■■□□□ 1.97
DNMT1-212ENST00000587197 FANCAO15360 1455 aa27.35■■□□□ 1.97
DNMT1-212ENST00000587197 ADGRL1O94910 1474 aa27.35■■□□□ 1.97
DNMT1-212ENST00000587197 RAPGEF3O95398 923 aa27.34■■□□□ 1.97
DNMT1-212ENST00000587197 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
DNMT1-212ENST00000587197 AKNAQ7Z591 1439 aa27.33■■□□□ 1.97
DNMT1-212ENST00000587197 TROQ12816 1431 aaPredicted RBP27.32■■□□□ 1.96
DNMT1-212ENST00000587197 LRRIQ1Q96JM4 1722 aa27.31■■□□□ 1.96
DNMT1-212ENST00000587197 PLCH2O75038 1416 aa27.3■■□□□ 1.96
DNMT1-212ENST00000587197 DENND4BO75064 1496 aaPredicted RBP27.3■■□□□ 1.96
DNMT1-212ENST00000587197 KIF14Q15058 1648 aa27.29■■□□□ 1.96
DNMT1-212ENST00000587197 EFCAB2Q5VUJ9 269 aa27.25■■□□□ 1.95
DNMT1-212ENST00000587197 MYO5CQ9NQX4 1742 aa27.23■■□□□ 1.95
DNMT1-212ENST00000587197 FRMPD1Q5SYB0 1578 aa27.22■■□□□ 1.95
DNMT1-212ENST00000587197 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
DNMT1-212ENST00000587197 RICTORQ6R327 1708 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms