RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 ZBTB47Q9UFB7 747 aaPredicted RBP24.01■■□□□ 1.43
NLE1-203ENST00000586869 SIN3AQ96ST3 1273 aa24.01■■□□□ 1.43
NLE1-203ENST00000586869 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
NLE1-203ENST00000586869 TIMELESSQ9UNS1 1208 aa23.98■■□□□ 1.43
NLE1-203ENST00000586869 WIZO95785 1651 aa23.95■■□□□ 1.43
NLE1-203ENST00000586869 SALL2Q9Y467 1007 aaPredicted RBP23.94■■□□□ 1.42
NLE1-203ENST00000586869 NPM1P06748 294 aaKnown RBP eCLIP23.94■■□□□ 1.42
NLE1-203ENST00000586869 NBR1Q14596 966 aa23.93■■□□□ 1.42
NLE1-203ENST00000586869 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
NLE1-203ENST00000586869 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
NLE1-203ENST00000586869 TSPY4P0CV99 314 aa23.87■■□□□ 1.41
NLE1-203ENST00000586869 TSPY10P0CW01 314 aa23.87■■□□□ 1.41
NLE1-203ENST00000586869 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
NLE1-203ENST00000586869 KANK4Q5T7N3 995 aaPredicted RBP23.86■■□□□ 1.41
NLE1-203ENST00000586869 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
NLE1-203ENST00000586869 KDM2AQ9Y2K7 1162 aa23.84■■□□□ 1.41
NLE1-203ENST00000586869 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.83■■□□□ 1.4
NLE1-203ENST00000586869 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
NLE1-203ENST00000586869 NEFMP07197 916 aa23.8■■□□□ 1.4
NLE1-203ENST00000586869 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
NLE1-203ENST00000586869 ERCC6Q03468 1493 aa23.77■■□□□ 1.4
NLE1-203ENST00000586869 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
NLE1-203ENST00000586869 UPF2Q9HAU5 1272 aaKnown RBP23.76■■□□□ 1.39
NLE1-203ENST00000586869 CUX2O14529 1486 aa23.75■■□□□ 1.39
NLE1-203ENST00000586869 RAB3GAP2Q9H2M9 1393 aa23.73■■□□□ 1.39
NLE1-203ENST00000586869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.73■■□□□ 1.39
NLE1-203ENST00000586869 ESF1Q9H501 851 aaKnown RBP23.68■■□□□ 1.38
NLE1-203ENST00000586869 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
NLE1-203ENST00000586869 ARHGAP35Q9NRY4 1499 aa23.66■■□□□ 1.38
NLE1-203ENST00000586869 RBM19Q9Y4C8 960 aaKnown RBP23.65■■□□□ 1.38
NLE1-203ENST00000586869 PLPPR3Q6T4P5 718 aa23.64■■□□□ 1.37
NLE1-203ENST00000586869 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
NLE1-203ENST00000586869 DDRGK1Q96HY6 314 aa23.63■■□□□ 1.37
NLE1-203ENST00000586869 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
NLE1-203ENST00000586869 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
NLE1-203ENST00000586869 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
NLE1-203ENST00000586869 TSHZ2Q9NRE2 1034 aa23.61■■□□□ 1.37
NLE1-203ENST00000586869 EIF5BO60841 1220 aaKnown RBP23.6■■□□□ 1.37
NLE1-203ENST00000586869 CARD11Q9BXL7 1154 aa23.6■■□□□ 1.37
NLE1-203ENST00000586869 BCL11AQ9H165 835 aa23.6■■□□□ 1.37
NLE1-203ENST00000586869 PLEKHD1A6NEE1 506 aa23.58■■□□□ 1.37
NLE1-203ENST00000586869 CHGAP10645 457 aaKnown RBP23.58■■□□□ 1.37
NLE1-203ENST00000586869 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
NLE1-203ENST00000586869 B4GALNT3Q6L9W6 998 aa23.56■■□□□ 1.36
NLE1-203ENST00000586869 ERICH6BQ5W0A0 696 aa23.56■■□□□ 1.36
NLE1-203ENST00000586869 SMARCA4P51532 1647 aa23.56■■□□□ 1.36
NLE1-203ENST00000586869 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
NLE1-203ENST00000586869 NOP58Q9Y2X3 529 aaKnown RBP23.54■■□□□ 1.36
NLE1-203ENST00000586869 HSP90AA1P07900 732 aaKnown RBP23.53■■□□□ 1.36
NLE1-203ENST00000586869 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
NLE1-203ENST00000586869 SENP3-EIF4A1A0A087X0R7 540 aa23.52■■□□□ 1.36
NLE1-203ENST00000586869 ANP32BQ92688 251 aaKnown RBP23.5■■□□□ 1.35
NLE1-203ENST00000586869 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
NLE1-203ENST00000586869 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
NLE1-203ENST00000586869 PPM1GO15355 546 aaPredicted RBP23.47■■□□□ 1.35
NLE1-203ENST00000586869 FMN1Q68DA7 1419 aa23.45■■□□□ 1.34
NLE1-203ENST00000586869 CDCA8Q53HL2 280 aa23.43■■□□□ 1.34
NLE1-203ENST00000586869 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
NLE1-203ENST00000586869 BECN1Q14457 450 aa23.41■■□□□ 1.34
NLE1-203ENST00000586869 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.33
NLE1-203ENST00000586869 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
NLE1-203ENST00000586869 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
NLE1-203ENST00000586869 MPHOSPH9Q99550 1183 aa23.35■■□□□ 1.33
NLE1-203ENST00000586869 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
NLE1-203ENST00000586869 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
NLE1-203ENST00000586869 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
NLE1-203ENST00000586869 FOXD1Q16676 465 aa23.29■■□□□ 1.32
NLE1-203ENST00000586869 ARXQ96QS3 562 aa23.29■■□□□ 1.32
NLE1-203ENST00000586869 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
NLE1-203ENST00000586869 DEKP35659 375 aaKnown RBP23.26■■□□□ 1.31
NLE1-203ENST00000586869 GLIPR1L2Q4G1C9 344 aa23.26■■□□□ 1.31
NLE1-203ENST00000586869 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
NLE1-203ENST00000586869 L3MBTL2Q969R5 705 aa23.24■■□□□ 1.31
NLE1-203ENST00000586869 PKD2Q13563 968 aa23.23■■□□□ 1.31
NLE1-203ENST00000586869 KIF21BO75037 1637 aa23.23■■□□□ 1.31
NLE1-203ENST00000586869 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
NLE1-203ENST00000586869 TMF1P82094 1093 aa23.22■■□□□ 1.31
NLE1-203ENST00000586869 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
NLE1-203ENST00000586869 RGS3P49796 1198 aa23.2■■□□□ 1.3
NLE1-203ENST00000586869 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
NLE1-203ENST00000586869 MYH16Q9H6N6 1097 aa23.18■■□□□ 1.3
NLE1-203ENST00000586869 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
NLE1-203ENST00000586869 RALBP1Q15311 655 aa23.17■■□□□ 1.3
NLE1-203ENST00000586869 KTN1Q86UP2 1357 aaKnown RBP23.16■■□□□ 1.3
NLE1-203ENST00000586869 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.3
NLE1-203ENST00000586869 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
NLE1-203ENST00000586869 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
NLE1-203ENST00000586869 FTSJ3Q8IY81 847 aaKnown RBP23.1■■□□□ 1.29
NLE1-203ENST00000586869 CCDC18Q5T9S5 1454 aa23.09■■□□□ 1.29
NLE1-203ENST00000586869 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
NLE1-203ENST00000586869 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
NLE1-203ENST00000586869 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
NLE1-203ENST00000586869 FRAT1Q92837 279 aaPredicted RBP23.07■■□□□ 1.28
NLE1-203ENST00000586869 PRKRIP1Q9H875 184 aaPredicted RBP23.06■■□□□ 1.28
NLE1-203ENST00000586869 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
NLE1-203ENST00000586869 IPO9Q96P70 1041 aaKnown RBP23.06■■□□□ 1.28
NLE1-203ENST00000586869 NUP155O75694 1391 aa23.06■■□□□ 1.28
NLE1-203ENST00000586869 TRIM44Q96DX7 344 aaPredicted RBP23.05■■□□□ 1.28
NLE1-203ENST00000586869 GOLGA6L22H0YM25 854 aa23.05■■□□□ 1.28
NLE1-203ENST00000586869 RTN4Q9NQC3 1192 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms