RNA–Protein interactions for RNA: ENST00000586616.5

PCSK4-205, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 2,855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-205ENST00000586616 SETD5Q9C0A6 1442 aa29.58■■■□□ 2.33
PCSK4-205ENST00000586616 DEKP35659 375 aaKnown RBP29.53■■■□□ 2.32
PCSK4-205ENST00000586616 PRKCSHP14314 528 aaPredicted RBP29.52■■■□□ 2.32
PCSK4-205ENST00000586616 MYT1LQ9UL68 1186 aa29.52■■■□□ 2.32
PCSK4-205ENST00000586616 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.32
PCSK4-205ENST00000586616 HNRNPUQ00839 825 aaKnown RBP eCLIP29.51■■■□□ 2.32
PCSK4-205ENST00000586616 TOP2BQ02880 1626 aa29.5■■■□□ 2.31
PCSK4-205ENST00000586616 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
PCSK4-205ENST00000586616 TIMELESSQ9UNS1 1208 aa29.46■■■□□ 2.31
PCSK4-205ENST00000586616 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.3
PCSK4-205ENST00000586616 FAM50AQ14320 339 aaKnown RBP29.44■■■□□ 2.3
PCSK4-205ENST00000586616 ARHGAP35Q9NRY4 1499 aa29.43■■■□□ 2.3
PCSK4-205ENST00000586616 PPP4R2Q9NY27 417 aa29.34■■■□□ 2.29
PCSK4-205ENST00000586616 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
PCSK4-205ENST00000586616 PHLDB1Q86UU1 1377 aa29.3■■■□□ 2.28
PCSK4-205ENST00000586616 NBR1Q14596 966 aa29.29■■■□□ 2.28
PCSK4-205ENST00000586616 ATAD2BQ9ULI0 1458 aa29.28■■■□□ 2.28
PCSK4-205ENST00000586616 ERICH6BQ5W0A0 696 aa29.27■■■□□ 2.28
PCSK4-205ENST00000586616 TIAM1Q13009 1591 aa29.26■■■□□ 2.27
PCSK4-205ENST00000586616 TONSLQ96HA7 1378 aa29.26■■■□□ 2.27
PCSK4-205ENST00000586616 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
PCSK4-205ENST00000586616 B4GALNT3Q6L9W6 998 aa29.25■■■□□ 2.27
PCSK4-205ENST00000586616 NOP58Q9Y2X3 529 aaKnown RBP29.23■■■□□ 2.27
PCSK4-205ENST00000586616 LRRC9Q6ZRR7 1453 aa29.2■■■□□ 2.26
PCSK4-205ENST00000586616 PAK3O75914 559 aaPredicted RBP29.15■■■□□ 2.26
PCSK4-205ENST00000586616 MAP3K1Q13233 1512 aa29.14■■■□□ 2.26
PCSK4-205ENST00000586616 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
PCSK4-205ENST00000586616 ATP1B4Q9UN42 357 aaPredicted RBP29.11■■■□□ 2.25
PCSK4-205ENST00000586616 ANO8Q9HCE9 1232 aaPredicted RBP29.1■■■□□ 2.25
PCSK4-205ENST00000586616 CUX1P39880 1505 aa29.07■■■□□ 2.24
PCSK4-205ENST00000586616 CCDC184Q52MB2 194 aa29.05■■■□□ 2.24
PCSK4-205ENST00000586616 FAM9BQ8IZU0 186 aa29.02■■■□□ 2.24
PCSK4-205ENST00000586616 WASHC2AQ641Q2 1341 aa29■■■□□ 2.23
PCSK4-205ENST00000586616 FHAD1B1AJZ9 1412 aa28.98■■■□□ 2.23
PCSK4-205ENST00000586616 RTL5Q5HYW3 569 aaPredicted RBP28.97■■■□□ 2.23
PCSK4-205ENST00000586616 P3H3Q8IVL6 736 aa28.97■■■□□ 2.23
PCSK4-205ENST00000586616 HSPA5P11021 654 aaKnown RBP28.94■■■□□ 2.22
PCSK4-205ENST00000586616 ANP32AP39687 249 aaKnown RBP28.92■■■□□ 2.22
PCSK4-205ENST00000586616 CCDC18Q5T9S5 1454 aa28.91■■■□□ 2.22
PCSK4-205ENST00000586616 SALL2Q9Y467 1007 aaPredicted RBP28.9■■■□□ 2.22
PCSK4-205ENST00000586616 MRS2Q9HD23 443 aa28.9■■■□□ 2.22
PCSK4-205ENST00000586616 ZBED9Q6R2W3 1325 aa28.89■■■□□ 2.22
PCSK4-205ENST00000586616 IPO9Q96P70 1041 aaKnown RBP28.89■■■□□ 2.22
PCSK4-205ENST00000586616 IGF1RP08069 1367 aa28.86■■■□□ 2.21
PCSK4-205ENST00000586616 ZBTB47Q9UFB7 747 aaPredicted RBP28.86■■■□□ 2.21
PCSK4-205ENST00000586616 CFAP43Q8NDM7 1665 aa28.86■■■□□ 2.21
PCSK4-205ENST00000586616 UACAQ9BZF9 1416 aa28.86■■■□□ 2.21
PCSK4-205ENST00000586616 PCF11O94913 1555 aaKnown RBP28.84■■■□□ 2.21
PCSK4-205ENST00000586616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.83■■■□□ 2.21
PCSK4-205ENST00000586616 PRKRIP1Q9H875 184 aaPredicted RBP28.83■■■□□ 2.21
PCSK4-205ENST00000586616 CNTLNQ9NXG0 1405 aa28.82■■■□□ 2.2
PCSK4-205ENST00000586616 IL27Q8NEV9 243 aa28.81■■■□□ 2.2
PCSK4-205ENST00000586616 EIF4G2P78344 907 aaKnown RBP eCLIP28.8■■■□□ 2.2
PCSK4-205ENST00000586616 CARMIL1Q5VZK9 1371 aa28.79■■■□□ 2.2
PCSK4-205ENST00000586616 KDM5BQ9UGL1 1544 aa28.79■■■□□ 2.2
PCSK4-205ENST00000586616 CCDC136Q96JN2 1154 aa28.79■■■□□ 2.2
PCSK4-205ENST00000586616 RTN4Q9NQC3 1192 aaKnown RBP28.77■■■□□ 2.2
PCSK4-205ENST00000586616 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
PCSK4-205ENST00000586616 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
PCSK4-205ENST00000586616 FGD6Q6ZV73 1430 aa28.74■■■□□ 2.19
PCSK4-205ENST00000586616 PTPRKQ15262 1439 aa28.73■■■□□ 2.19
PCSK4-205ENST00000586616 AKNAQ7Z591 1439 aa28.72■■■□□ 2.19
PCSK4-205ENST00000586616 C11orf95C9JLR9 678 aaPredicted RBP28.71■■■□□ 2.19
PCSK4-205ENST00000586616 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.195e-8■■■■□ 21.5
PCSK4-205ENST00000586616 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.18
PCSK4-205ENST00000586616 PTPN23Q9H3S7 1636 aa28.7■■■□□ 2.18
PCSK4-205ENST00000586616 CCDC7Q96M83 1385 aa28.65■■■□□ 2.18
PCSK4-205ENST00000586616 NAIPQ13075 1403 aa28.65■■■□□ 2.18
PCSK4-205ENST00000586616 FYCO1Q9BQS8 1478 aa28.62■■■□□ 2.17
PCSK4-205ENST00000586616 NPM2Q86SE8 214 aaKnown RBP28.62■■■□□ 2.17
PCSK4-205ENST00000586616 SMG6Q86US8 1419 aaKnown RBP28.61■■■□□ 2.17
PCSK4-205ENST00000586616 NUDCQ9Y266 331 aa28.6■■■□□ 2.17
PCSK4-205ENST00000586616 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
PCSK4-205ENST00000586616 CNGB1Q14028 1251 aaPredicted RBP28.59■■■□□ 2.17
PCSK4-205ENST00000586616 CASKIN1Q8WXD9 1431 aa28.59■■■□□ 2.17
PCSK4-205ENST00000586616 NCOA1Q15788 1441 aa28.58■■■□□ 2.17
PCSK4-205ENST00000586616 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.57■■■□□ 2.16
PCSK4-205ENST00000586616 MTUS2Q5JR59 1369 aa28.57■■■□□ 2.16
PCSK4-205ENST00000586616 LAS1LQ9Y4W2 734 aaKnown RBP28.56■■■□□ 2.16
PCSK4-205ENST00000586616 CFTRP13569 1480 aa28.55■■■□□ 2.16
PCSK4-205ENST00000586616 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
PCSK4-205ENST00000586616 SENP3-EIF4A1A0A087X0R7 540 aa28.55■■■□□ 2.16
PCSK4-205ENST00000586616 NEFMP07197 916 aa28.55■■■□□ 2.16
PCSK4-205ENST00000586616 RRP7BPQ9NSQ0 103 aa28.54■■■□□ 2.16
PCSK4-205ENST00000586616 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
PCSK4-205ENST00000586616 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
PCSK4-205ENST00000586616 RNF123Q5XPI4 1314 aa28.52■■■□□ 2.16
PCSK4-205ENST00000586616 CHIC2Q9UKJ5 165 aa28.49■■■□□ 2.15
PCSK4-205ENST00000586616 KIF7Q2M1P5 1343 aa28.48■■■□□ 2.15
PCSK4-205ENST00000586616 FOXD1Q16676 465 aa28.43■■■□□ 2.14
PCSK4-205ENST00000586616 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
PCSK4-205ENST00000586616 DENND4BO75064 1496 aaPredicted RBP28.41■■■□□ 2.14
PCSK4-205ENST00000586616 MYOM3Q5VTT5 1437 aa28.41■■■□□ 2.14
PCSK4-205ENST00000586616 NBPF8Q3BBV2 869 aa28.4■■■□□ 2.14
PCSK4-205ENST00000586616 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
PCSK4-205ENST00000586616 EFCAB5A4FU69 1503 aa28.39■■■□□ 2.14
PCSK4-205ENST00000586616 MPHOSPH9Q99550 1183 aa28.38■■■□□ 2.13
PCSK4-205ENST00000586616 POLR3GLQ9BT43 218 aa28.36■■■□□ 2.13
PCSK4-205ENST00000586616 PDE4AP27815 886 aa28.35■■■□□ 2.13
PCSK4-205ENST00000586616 WASHC2CQ9Y4E1 1318 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms