RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
GRN-205ENST00000586443 EFCAB5A4FU69 1503 aa29.52■■■□□ 2.32
GRN-205ENST00000586443 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
GRN-205ENST00000586443 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
GRN-205ENST00000586443 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
GRN-205ENST00000586443 IQGAP2Q13576 1575 aa29.39■■■□□ 2.3
GRN-205ENST00000586443 SAMD9Q5K651 1589 aa29.39■■■□□ 2.3
GRN-205ENST00000586443 KIAA0586Q9BVV6 1533 aa29.34■■■□□ 2.29
GRN-205ENST00000586443 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
GRN-205ENST00000586443 PCGF6Q9BYE7 350 aa29.33■■■□□ 2.29
GRN-205ENST00000586443 APLP2Q06481 763 aa29.29■■■□□ 2.28
GRN-205ENST00000586443 UGGT2Q9NYU1 1516 aa29.27■■■□□ 2.28
GRN-205ENST00000586443 NUP160Q12769 1436 aa29.27■■■□□ 2.28
GRN-205ENST00000586443 FHOD3Q2V2M9 1422 aa29.27■■■□□ 2.28
GRN-205ENST00000586443 PPARGC1BQ86YN6 1023 aaKnown RBP29.26■■■□□ 2.28
GRN-205ENST00000586443 CEP170Q5SW79 1584 aa29.26■■■□□ 2.27
GRN-205ENST00000586443 FMN1Q68DA7 1419 aa29.22■■■□□ 2.27
GRN-205ENST00000586443 P3H3Q8IVL6 736 aa29.2■■■□□ 2.26
GRN-205ENST00000586443 MAP3K1Q13233 1512 aa29.19■■■□□ 2.26
GRN-205ENST00000586443 PCF11O94913 1555 aaKnown RBP29.18■■■□□ 2.26
GRN-205ENST00000586443 FBLN2P98095 1184 aa29.18■■■□□ 2.26
GRN-205ENST00000586443 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
GRN-205ENST00000586443 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
GRN-205ENST00000586443 CHD1O14646 1710 aa29.13■■■□□ 2.25
GRN-205ENST00000586443 KIAA0556O60303 1618 aa29.1■■■□□ 2.25
GRN-205ENST00000586443 TIAM1Q13009 1591 aa29.09■■■□□ 2.25
GRN-205ENST00000586443 DISP1Q96F81 1524 aa29.08■■■□□ 2.25
GRN-205ENST00000586443 CFAP43Q8NDM7 1665 aa29.07■■■□□ 2.24
GRN-205ENST00000586443 TTBK1Q5TCY1 1321 aaPredicted RBP29.02■■■□□ 2.24
GRN-205ENST00000586443 KANK4Q5T7N3 995 aaPredicted RBP28.99■■■□□ 2.23
GRN-205ENST00000586443 CARMIL2Q6F5E8 1435 aa28.97■■■□□ 2.23
GRN-205ENST00000586443 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
GRN-205ENST00000586443 LRRC9Q6ZRR7 1453 aa28.94■■■□□ 2.22
GRN-205ENST00000586443 HECW1Q76N89 1606 aa28.93■■■□□ 2.22
GRN-205ENST00000586443 LRRIQ1Q96JM4 1722 aa28.89■■■□□ 2.22
GRN-205ENST00000586443 SHROOM2Q13796 1616 aa28.89■■■□□ 2.21
GRN-205ENST00000586443 ATP1B4Q9UN42 357 aaPredicted RBP28.88■■■□□ 2.21
GRN-205ENST00000586443 CCDC18Q5T9S5 1454 aa28.88■■■□□ 2.21
GRN-205ENST00000586443 CLASP1Q7Z460 1538 aa28.83■■■□□ 2.21
GRN-205ENST00000586443 RAPGEF6Q8TEU7 1601 aa28.81■■■□□ 2.2
GRN-205ENST00000586443 PRG4Q92954 1404 aaPredicted RBP28.81■■■□□ 2.2
GRN-205ENST00000586443 EPRSP07814 1512 aaKnown RBP28.78■■■□□ 2.2
GRN-205ENST00000586443 RRBP1Q9P2E9 1410 aaKnown RBP28.76■■■□□ 2.19
GRN-205ENST00000586443 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
GRN-205ENST00000586443 NUP153P49790 1475 aaKnown RBP28.73■■■□□ 2.19
GRN-205ENST00000586443 MTUS2Q5JR59 1369 aa28.71■■■□□ 2.19
GRN-205ENST00000586443 ABCA8O94911 1581 aa28.68■■■□□ 2.18
GRN-205ENST00000586443 PLB1Q6P1J6 1458 aa28.68■■■□□ 2.18
GRN-205ENST00000586443 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
GRN-205ENST00000586443 PHLDB1Q86UU1 1377 aa28.64■■■□□ 2.18
GRN-205ENST00000586443 SUPT6HQ7KZ85 1726 aaKnown RBP28.64■■■□□ 2.18
GRN-205ENST00000586443 CCNB3Q8WWL7 1395 aa28.64■■■□□ 2.17
GRN-205ENST00000586443 MAGI3Q5TCQ9 1506 aa28.64■■■□□ 2.17
GRN-205ENST00000586443 PTPRGP23470 1445 aa28.63■■■□□ 2.17
GRN-205ENST00000586443 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
GRN-205ENST00000586443 NCOA2Q15596 1464 aa28.58■■■□□ 2.17
GRN-205ENST00000586443 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
GRN-205ENST00000586443 HRCP23327 699 aa28.54■■■□□ 2.16
GRN-205ENST00000586443 CDK11AQ9UQ88 783 aaPredicted RBP28.53■■■□□ 2.16
GRN-205ENST00000586443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.5■■■□□ 2.15
GRN-205ENST00000586443 UACAQ9BZF9 1416 aa28.49■■■□□ 2.15
GRN-205ENST00000586443 MYOM3Q5VTT5 1437 aa28.49■■■□□ 2.15
GRN-205ENST00000586443 OSCARQ8IYS5 282 aa28.49■■■□□ 2.15
GRN-205ENST00000586443 FGD6Q6ZV73 1430 aa28.47■■■□□ 2.15
GRN-205ENST00000586443 ARID3CA6NKF2 412 aa28.47■■■□□ 2.15
GRN-205ENST00000586443 HNRNPUL2Q1KMD3 747 aaKnown RBP28.47■■■□□ 2.15
GRN-205ENST00000586443 ATP10BO94823 1461 aa28.45■■■□□ 2.15
GRN-205ENST00000586443 TROQ12816 1431 aaPredicted RBP28.45■■■□□ 2.15
GRN-205ENST00000586443 ABCC2Q92887 1545 aa28.43■■■□□ 2.14
GRN-205ENST00000586443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.43■■■□□ 2.14
GRN-205ENST00000586443 ADCY10Q96PN6 1610 aa28.42■■■□□ 2.14
GRN-205ENST00000586443 UHRF1BP1LA0JNW5 1464 aa28.39■■■□□ 2.14
GRN-205ENST00000586443 MIA2Q96PC5 1412 aa28.36■■■□□ 2.13
GRN-205ENST00000586443 FAM50AQ14320 339 aaKnown RBP28.34■■■□□ 2.13
GRN-205ENST00000586443 PTPN23Q9H3S7 1636 aa28.33■■■□□ 2.13
GRN-205ENST00000586443 TCOF1Q13428 1488 aaKnown RBP28.33■■■□□ 2.13
GRN-205ENST00000586443 PLEKHD1A6NEE1 506 aa28.33■■■□□ 2.12
GRN-205ENST00000586443 ZEB1P37275 1124 aaPredicted RBP28.29■■■□□ 2.12
GRN-205ENST00000586443 KIF14Q15058 1648 aa28.29■■■□□ 2.12
GRN-205ENST00000586443 ITSN2Q9NZM3 1697 aa28.27■■■□□ 2.12
GRN-205ENST00000586443 KDM5BQ9UGL1 1544 aa28.25■■■□□ 2.11
GRN-205ENST00000586443 ITGAEP38570 1179 aa28.23■■■□□ 2.11
GRN-205ENST00000586443 CCER1Q8TC90 406 aaPredicted RBP28.22■■■□□ 2.11
GRN-205ENST00000586443 ABCC10Q5T3U5 1492 aa28.21■■■□□ 2.11
GRN-205ENST00000586443 ZCCHC11Q5TAX3 1644 aaKnown RBP28.21■■■□□ 2.11
GRN-205ENST00000586443 GPATCH8Q9UKJ3 1502 aaKnown RBP28.19■■■□□ 2.1
GRN-205ENST00000586443 CDC42BPAQ5VT25 1732 aa28.13■■■□□ 2.09
GRN-205ENST00000586443 SETD5Q9C0A6 1442 aa28.13■■■□□ 2.09
GRN-205ENST00000586443 PTPRKQ15262 1439 aa28.1■■■□□ 2.09
GRN-205ENST00000586443 CFDP1Q9UEE9 299 aaPredicted RBP28.08■■■□□ 2.09
GRN-205ENST00000586443 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
GRN-205ENST00000586443 CAMSAP2Q08AD1 1489 aa28.07■■■□□ 2.08
GRN-205ENST00000586443 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
GRN-205ENST00000586443 HFM1A2PYH4 1435 aa28.05■■■□□ 2.08
GRN-205ENST00000586443 PREX2Q70Z35 1606 aa28.04■■■□□ 2.08
GRN-205ENST00000586443 AKNAQ7Z591 1439 aa28.04■■■□□ 2.08
GRN-205ENST00000586443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.081e-6■■■■□ 23.9
GRN-205ENST00000586443 DAPK1P53355 1430 aa28.02■■■□□ 2.08
GRN-205ENST00000586443 TTC37Q6PGP7 1564 aa28.01■■■□□ 2.07
GRN-205ENST00000586443 DHX57Q6P158 1386 aaKnown RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms